Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_K06
(836 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 248 8e-67
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 132 8e-32
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 122 6e-29
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 105 6e-24
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 71 2e-13
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 65 1e-11
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 64 2e-11
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 43 5e-05
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.12
SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyc... 28 1.4
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 27 2.5
SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomy... 27 2.5
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 4.4
SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ... 27 4.4
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 26 5.8
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 5.8
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 26 5.8
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 7.6
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 7.6
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 248 bits (607), Expect = 8e-67
Identities = 125/175 (71%), Positives = 130/175 (74%), Gaps = 1/175 (0%)
Frame = +3
Query: 216 PRXVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 395
P VGRPRH G+MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFY
Sbjct: 32 PSIVGRPRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFY 91
Query: 396 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGY 575
NELRVAPEEHP LLTEAPLNPK+NREKMTQI+FETFN PA YVAIQAVLSLYASGRTTG
Sbjct: 92 NELRVAPEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGI 151
Query: 576 RAGLRRRCLPHRAHLRGIRTPPRHPASGLSRVATS-QXYLM*ILTERGYSFTXTA 737
G P H L YLM IL ERGY+F+ TA
Sbjct: 152 VLDSGDGVTHTVPIYEGYALP--HAIMRLDLAGRDLTDYLMKILMERGYTFSTTA 204
Score = 70.9 bits (166), Expect = 2e-13
Identities = 31/33 (93%), Positives = 33/33 (100%)
Frame = +1
Query: 571 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 669
GIVLDSGDGV+HTVPIYEGYALPHAI+RLDLAG
Sbjct: 150 GIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAG 182
Score = 70.1 bits (164), Expect = 4e-13
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +2
Query: 125 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 232
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPS G+
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGR 37
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 132 bits (318), Expect = 8e-32
Identities = 61/120 (50%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Frame = +3
Query: 216 PRXVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 395
P VGR +H+ VM QKD +VG EAQ+ RG+L ++ PIE GI+ NW DME+IW + +
Sbjct: 36 PTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYS 95
Query: 396 N-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 572
+ +L PEEHP+LLTE PL N+EK+ + +ET N PA+ ++Q VL+LYAS RTTG
Sbjct: 96 DQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSLQPVLALYASARTTG 155
Score = 46.0 bits (104), Expect = 7e-06
Identities = 17/33 (51%), Positives = 28/33 (84%)
Frame = +1
Query: 571 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 669
GIVL+ GDG++H+VPIY+G+++P AI + ++ G
Sbjct: 155 GIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGG 187
Score = 44.8 bits (101), Expect = 2e-05
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 143 LVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 232
+ +DNGSG KAGFAGDD P+ +FP+ G+
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGR 41
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 122 bits (294), Expect = 6e-29
Identities = 57/121 (47%), Positives = 84/121 (69%), Gaps = 2/121 (1%)
Frame = +3
Query: 216 PRXVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHT 389
P VGRP R + + KD VGDEA++ R +L +KYP+E+GI+ ++++M ++W +T
Sbjct: 30 PSIVGRPILRAEEKTGNVQIKDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYT 89
Query: 390 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 569
F+ +L++ P +LLTE P+NP ANREKM + MFE + +YVAIQAVLSLYA G ++
Sbjct: 90 FFEKLKIDPRGRKILLTEPPMNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSS 149
Query: 570 G 572
G
Sbjct: 150 G 150
Score = 49.6 bits (113), Expect = 5e-07
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +1
Query: 571 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 669
G+V+DSGDGV+H VP+YE L H + RLD+AG
Sbjct: 150 GVVVDSGDGVTHIVPVYESVVLNHLVGRLDVAG 182
Score = 39.1 bits (87), Expect = 8e-04
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2
Query: 131 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 232
E A +V+DNG+G K G+A D+ PR FPS G+
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGR 35
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 105 bits (253), Expect = 6e-24
Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = +3
Query: 273 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 449
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H LLTE P
Sbjct: 73 DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPP 132
Query: 450 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 557
LNP NRE +IMFE+FN +Y+A+QAVL+L AS
Sbjct: 133 LNPPENRENTAEIMFESFNCAGLYIAVQAVLALAAS 168
Score = 42.3 bits (95), Expect = 8e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 571 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 669
G V+DSGDGV+H +P+ EGY + +I + LAG
Sbjct: 181 GTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAG 213
Score = 38.3 bits (85), Expect = 0.001
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +2
Query: 143 LVVDNGSGMCKAGFAGDDAPRAVFPS 220
+++DNG+G K G+AG+DAP VFP+
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPT 33
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 71.3 bits (167), Expect = 2e-13
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = +3
Query: 315 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 494
+ +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K + MF
Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMF 122
Query: 495 ETFNTPAMYVAIQAVLSLYASGRTT 569
E+ PA Y+A Q + +ASG+ T
Sbjct: 123 ESLRCPATYLAKQETCAAFASGKGT 147
Score = 39.9 bits (89), Expect = 4e-04
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 128 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 232
+EV+A+V+D GS + GF+G+D P+ V PS G+
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGE 43
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 64.9 bits (151), Expect = 1e-11
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Frame = +3
Query: 234 PRHQGVMVGMGQKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 407
P + GV + ++ YV DE Q I + +K +GI+ +W+ W +L+
Sbjct: 37 PSYYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQ 96
Query: 408 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 569
V P E+ +++TE NP++ R+++ + FE + PA Y+ QAV +A+ ++T
Sbjct: 97 VNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKST 150
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +2
Query: 128 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRG-KAPPSGRD 253
EE+ +LV+D GS + G+AG+++P + PS G ++ +GR+
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYGVRSDVTGRN 50
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 64.5 bits (150), Expect = 2e-11
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +3
Query: 261 MGQKDSYVGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 437
+ + + VG++ + G ++ + P E +++NWD ME++ +TF +L + EHP+ +
Sbjct: 62 LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICM 120
Query: 438 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 551
TE NP R MT+++FE +N P++ I + S Y
Sbjct: 121 TEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFY 158
Score = 30.7 bits (66), Expect = 0.27
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 143 LVVDNGSGMCKAGFAGDDAPRAVF 214
LV+DNGS +AG+ G+ P+ VF
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVF 50
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 571 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGSR 675
GIVL+ G+ SH +P+ G + R+ GS+
Sbjct: 167 GIVLNLGNAASHVIPVLNGERILSEAKRISWGGSQ 201
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 43.2 bits (97), Expect = 5e-05
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +3
Query: 330 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 497
PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 498 TFNTPAMYVAIQAVLSLYASG 560
P +A + ++ LYA G
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIG 192
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.9 bits (69), Expect = 0.12
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +3
Query: 390 FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 533
+Y L E+HP+LLT+ A L P+ + ++ +I ++ NTP + VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451
>SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 721
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +1
Query: 586 SGDGVSHTVPIYEGYALPHAILRLDLAGSRPHXTTSCRSSPSAAT 720
+G G+ H + + +GYA+P ++ + S + C +P T
Sbjct: 157 AGRGIGHQIMVEQGYAMPGSMAVASDSHSNTYGGVGCLGTPIVRT 201
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 574 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 669
+V+DSG +H +P+ + A+ R+D+ G
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGG 190
>SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 27.5 bits (58), Expect = 2.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 624 GIRTPPRHPASGLSRVATSQXY 689
GI+ PP+HP S + + S Y
Sbjct: 538 GIKNPPKHPLSSTAEIVLSSCY 559
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -3
Query: 276 SPSVPYRPSRPDGGAFPRXEGNTARGASSPAKPALHIPEP 157
+P VP P RP P R A AL +P+P
Sbjct: 538 APEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQP 577
>SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase
Its3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 742
Score = 26.6 bits (56), Expect = 4.4
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
Frame = +1
Query: 505 TRPPCTSPSKPC--SRCTRPVVPPGIVLDSGDGVSHTVPIYEGYALPHAI-LRLDLAGSR 675
+ P SPS S T VP GI+ DS + P + P L+ L+ +
Sbjct: 91 SNPTAHSPSSSSNDSVITATGVPDGILRDSPIVSALEPPSSNSSSSPQLQNLKHQLSSPQ 150
Query: 676 PHXTTSCRSSPSAATRSLXPPAERGNRS 759
P RSS + T S PP +R S
Sbjct: 151 PSRAPIDRSSSNPVTSSQQPPNDRSTLS 178
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 26.2 bits (55), Expect = 5.8
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = -3
Query: 306 FCSVPHLLHKSPSVPYRPSRPDGGAFPRXEGNTARGASSPAKPALHIPEPLSTTNAATSS 127
F S+P + K P+ P P + + A +S+P P P+ + ++TSS
Sbjct: 193 FSSLPLVSSKPTGTPFVPKSPPSSSPSTTNVSNASTSSAPINP--RAPQTRRESISSTSS 250
Query: 126 SH 121
H
Sbjct: 251 IH 252
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 5.8
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 432 LLTEAPLNPKANREKMTQIMFETFN 506
+L APL+ + +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 26.2 bits (55), Expect = 5.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 297 VPHLLHKSPSVPYRPSRPDGGA 232
+ L+ K+PS PY SRP A
Sbjct: 306 IDQLISKAPSYPYSSSRPSASA 327
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 326 FEGQDTSFALCLISYIRVLLSHTDHHA 246
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.8 bits (54), Expect = 7.6
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -1
Query: 704 EDLHEVVL*GRDPAKSRRRMAWGSAYPS*MGTVWETPSPESSTI 573
+DLH+ R P + ++M W T W PS E++ I
Sbjct: 974 DDLHKTTGLTRRPTRRLKQMHWEKLNSGLEFTFWTGPSDEANKI 1017
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,424,775
Number of Sequences: 5004
Number of extensions: 74123
Number of successful extensions: 245
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 412451140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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