Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_K05
(833 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF024493-10|AAK68346.1| 232|Caenorhabditis elegans C. elegans N... 105 5e-23
AL132949-3|CAB61070.1| 179|Caenorhabditis elegans Hypothetical ... 69 4e-12
Z70753-7|CAD82914.1| 305|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z70753-6|CAA94762.1| 331|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 26 0.35
Z93388-8|CAB07656.1| 127|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z92789-4|CAB07221.1| 127|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z83245-10|CAB05838.1| 127|Caenorhabditis elegans Hypothetical p... 31 1.0
Z83245-6|CAB05836.1| 127|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z82271-4|CAB05212.1| 127|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81495-2|CAB04056.1| 127|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81128-6|CAB03399.1| 127|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z73102-8|CAA97414.1| 127|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z70750-11|CAA94747.1| 127|Caenorhabditis elegans Hypothetical p... 31 1.0
X15633-1|CAA33641.1| 127|Caenorhabditis elegans histone protein... 31 1.0
U64845-8|AAC48024.1| 127|Caenorhabditis elegans Histone protein... 31 1.0
U64843-8|AAF98222.1| 127|Caenorhabditis elegans Histone protein... 31 1.0
U64843-5|AAF98219.1| 127|Caenorhabditis elegans Histone protein... 31 1.0
U58750-7|AAB00647.1| 127|Caenorhabditis elegans Histone protein... 31 1.0
U40934-9|AAA81686.1| 127|Caenorhabditis elegans Histone protein... 31 1.0
AF047656-4|AAC05100.1| 127|Caenorhabditis elegans Histone prote... 31 1.0
AC024696-8|AAK84512.1| 127|Caenorhabditis elegans Histone prote... 31 1.0
AC024696-5|AAK84506.1| 127|Caenorhabditis elegans Histone prote... 31 1.0
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 25 1.7
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 30 1.8
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 29 4.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.1
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 26 4.5
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 26 4.6
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 29 5.4
AC024808-4|AAK29924.1| 252|Caenorhabditis elegans Hypothetical ... 29 5.4
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 28 7.2
AC024776-4|AAK68465.2| 155|Caenorhabditis elegans Hypothetical ... 28 7.2
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 28 9.5
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 9.5
>AF024493-10|AAK68346.1| 232|Caenorhabditis elegans C. elegans
NFYC-1 protein protein.
Length = 232
Score = 105 bits (251), Expect = 5e-23
Identities = 48/113 (42%), Positives = 77/113 (68%), Gaps = 6/113 (5%)
Frame = +3
Query: 315 QQFWDKVLEDIQKVNSEDF----KTQALPLARIKKIMKLDEEVK--MVSAEAPVLFAKAA 476
+ FW + + + +++ ED K ++P+AR+KKIM++D++V+ M++++AP+ A+AA
Sbjct: 83 EDFWREKKQKMTEISEEDMLNKSKNMSVPMARVKKIMRIDDDVRNFMIASDAPIFMAQAA 142
Query: 477 EIFIHELTLRAWSHTEENKRRTLQRNDIATAILKSDQFDFLIDIVPRHEVKPT 635
E FI E+T W + E +RR LQ+ DIA+A+ KSDQFDFLID +P V T
Sbjct: 143 EFFIEEMTAMGWQYVSEARRRILQKADIASAVQKSDQFDFLIDFLPPKTVPTT 195
>AL132949-3|CAB61070.1| 179|Caenorhabditis elegans Hypothetical
protein Y53F4B.3 protein.
Length = 179
Score = 68.9 bits (161), Expect = 4e-12
Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 5/105 (4%)
Frame = +3
Query: 339 EDIQKVNS--EDFKTQALPLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAW 512
ED++++ E+ LPL R+KK+++++ +V+M++ EA L AKAAE+FI EL+ A
Sbjct: 19 EDVREIEEHVEELVRSQLPLGRVKKVVRMNPDVEMLNNEALQLMAKAAELFIKELSNAAN 78
Query: 513 SHTEENKRRTLQRNDIATAILKSDQFDFLIDIV---PRHEVKPTK 638
+ KR+T+Q DI AI K+ F FL D + P+ E K K
Sbjct: 79 QNAALEKRKTVQTKDIDKAIKKTWAFAFLEDALDGWPKLEPKKRK 123
>Z70753-7|CAD82914.1| 305|Caenorhabditis elegans Hypothetical
protein F40F9.7b protein.
Length = 305
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +3
Query: 369 FKTQALPLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQ 548
F T + RIKK+M+ DE++ + PV +A E F + A T+ +TL
Sbjct: 35 FSTAKIQPTRIKKVMQSDEDIGRMVQSVPVSIGRAMEHFAEKFLQAAAEATQFTSSKTLN 94
Query: 549 RNDIATAILKSDQFDFL 599
+ A+L + F FL
Sbjct: 95 PQHMKQAVLNTPHFSFL 111
>Z70753-6|CAA94762.1| 331|Caenorhabditis elegans Hypothetical
protein F40F9.7a protein.
Length = 331
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +3
Query: 369 FKTQALPLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQ 548
F T + RIKK+M+ DE++ + PV +A E F + A T+ +TL
Sbjct: 61 FSTAKIQPTRIKKVMQSDEDIGRMVQSVPVSIGRAMEHFAEKFLQAAAEATQFTSSKTLN 120
Query: 549 RNDIATAILKSDQFDFL 599
+ A+L + F FL
Sbjct: 121 PQHMKQAVLNTPHFSFL 137
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 26.2 bits (55), Expect(2) = 0.35
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -3
Query: 801 PPPPPXXPPXVPLEXRAVSRFEAANCSVGPPDAAA 697
PPPPP PP P +V+ + G D A
Sbjct: 362 PPPPPPPPPQTPSASSSVTFSPTKSVDGGRSDLMA 396
Score = 25.0 bits (52), Expect(2) = 0.35
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 822 PPXX*RXPPPPPXXPP 775
PP PPPPP PP
Sbjct: 354 PPAPPPPPPPPPPPPP 369
>Z93388-8|CAB07656.1| 127|Caenorhabditis elegans Hypothetical
protein T10C6.12 protein.
Length = 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 387 PLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 566
P+ R+ +I++ + V A APV A E E+ A + +NK+ + +
Sbjct: 28 PVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQL 87
Query: 567 AILKSDQFDFLI 602
A+ ++ + L+
Sbjct: 88 AVRNDEELNKLL 99
>Z92789-4|CAB07221.1| 127|Caenorhabditis elegans Hypothetical
protein H02I12.7 protein.
Length = 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 387 PLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 566
P+ R+ +I++ + V A APV A E E+ A + +NK+ + +
Sbjct: 28 PVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQL 87
Query: 567 AILKSDQFDFLI 602
A+ ++ + L+
Sbjct: 88 AVRNDEELNKLL 99
>Z83245-10|CAB05838.1| 127|Caenorhabditis elegans Hypothetical
protein ZK131.10 protein.
Length = 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 387 PLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 566
P+ R+ +I++ + V A APV A E E+ A + +NK+ + +
Sbjct: 28 PVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQL 87
Query: 567 AILKSDQFDFLI 602
A+ ++ + L+
Sbjct: 88 AVRNDEELNKLL 99
>Z83245-6|CAB05836.1| 127|Caenorhabditis elegans Hypothetical
protein ZK131.6 protein.
Length = 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 387 PLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 566
P+ R+ +I++ + V A APV A E E+ A + +NK+ + +
Sbjct: 28 PVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQL 87
Query: 567 AILKSDQFDFLI 602
A+ ++ + L+
Sbjct: 88 AVRNDEELNKLL 99
>Z82271-4|CAB05212.1| 127|Caenorhabditis elegans Hypothetical
protein F54E12.5 protein.
Length = 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 387 PLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 566
P+ R+ +I++ + V A APV A E E+ A + +NK+ + +
Sbjct: 28 PVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQL 87
Query: 567 AILKSDQFDFLI 602
A+ ++ + L+
Sbjct: 88 AVRNDEELNKLL 99
>Z81495-2|CAB04056.1| 127|Caenorhabditis elegans Hypothetical
protein F08G2.2 protein.
Length = 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 387 PLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 566
P+ R+ +I++ + V A APV A E E+ A + +NK+ + +
Sbjct: 28 PVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQL 87
Query: 567 AILKSDQFDFLI 602
A+ ++ + L+
Sbjct: 88 AVRNDEELNKLL 99
>Z81128-6|CAB03399.1| 127|Caenorhabditis elegans Hypothetical
protein T23D8.6 protein.
Length = 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 387 PLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 566
P+ R+ +I++ + V A APV A E E+ A + +NK+ + +
Sbjct: 28 PVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQL 87
Query: 567 AILKSDQFDFLI 602
A+ ++ + L+
Sbjct: 88 AVRNDEELNKLL 99
>Z73102-8|CAA97414.1| 127|Caenorhabditis elegans Hypothetical
protein B0035.7 protein.
Length = 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 387 PLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 566
P+ R+ +I++ + V A APV A E E+ A + +NK+ + +
Sbjct: 28 PVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQL 87
Query: 567 AILKSDQFDFLI 602
A+ ++ + L+
Sbjct: 88 AVRNDEELNKLL 99
>Z70750-11|CAA94747.1| 127|Caenorhabditis elegans Hypothetical
protein C50F4.13 protein.
Length = 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 387 PLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 566
P+ R+ +I++ + V A APV A E E+ A + +NK+ + +
Sbjct: 28 PVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQL 87
Query: 567 AILKSDQFDFLI 602
A+ ++ + L+
Sbjct: 88 AVRNDEELNKLL 99
>X15633-1|CAA33641.1| 127|Caenorhabditis elegans histone protein
protein.
Length = 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 387 PLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 566
P+ R+ +I++ + V A APV A E E+ A + +NK+ + +
Sbjct: 28 PVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQL 87
Query: 567 AILKSDQFDFLI 602
A+ ++ + L+
Sbjct: 88 AVRNDEELNKLL 99
>U64845-8|AAC48024.1| 127|Caenorhabditis elegans Histone protein 7
protein.
Length = 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 387 PLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 566
P+ R+ +I++ + V A APV A E E+ A + +NK+ + +
Sbjct: 28 PVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQL 87
Query: 567 AILKSDQFDFLI 602
A+ ++ + L+
Sbjct: 88 AVRNDEELNKLL 99
>U64843-8|AAF98222.1| 127|Caenorhabditis elegans Histone protein 19
protein.
Length = 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 387 PLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 566
P+ R+ +I++ + V A APV A E E+ A + +NK+ + +
Sbjct: 28 PVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQL 87
Query: 567 AILKSDQFDFLI 602
A+ ++ + L+
Sbjct: 88 AVRNDEELNKLL 99
>U64843-5|AAF98219.1| 127|Caenorhabditis elegans Histone protein 21
protein.
Length = 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 387 PLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 566
P+ R+ +I++ + V A APV A E E+ A + +NK+ + +
Sbjct: 28 PVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQL 87
Query: 567 AILKSDQFDFLI 602
A+ ++ + L+
Sbjct: 88 AVRNDEELNKLL 99
>U58750-7|AAB00647.1| 127|Caenorhabditis elegans Histone protein 61
protein.
Length = 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 387 PLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 566
P+ R+ +I++ + V A APV A E E+ A + +NK+ + +
Sbjct: 28 PVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQL 87
Query: 567 AILKSDQFDFLI 602
A+ ++ + L+
Sbjct: 88 AVRNDEELNKLL 99
>U40934-9|AAA81686.1| 127|Caenorhabditis elegans Histone protein 30
protein.
Length = 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 387 PLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 566
P+ R+ +I++ + V A APV A E E+ A + +NK+ + +
Sbjct: 28 PVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQL 87
Query: 567 AILKSDQFDFLI 602
A+ ++ + L+
Sbjct: 88 AVRNDEELNKLL 99
>AF047656-4|AAC05100.1| 127|Caenorhabditis elegans Histone protein
33 protein.
Length = 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 387 PLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 566
P+ R+ +I++ + V A APV A E E+ A + +NK+ + +
Sbjct: 28 PVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQL 87
Query: 567 AILKSDQFDFLI 602
A+ ++ + L+
Sbjct: 88 AVRNDEELNKLL 99
>AC024696-8|AAK84512.1| 127|Caenorhabditis elegans Histone protein
53 protein.
Length = 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 387 PLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 566
P+ R+ +I++ + V A APV A E E+ A + +NK+ + +
Sbjct: 28 PVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQL 87
Query: 567 AILKSDQFDFLI 602
A+ ++ + L+
Sbjct: 88 AVRNDEELNKLL 99
>AC024696-5|AAK84506.1| 127|Caenorhabditis elegans Histone protein
51 protein.
Length = 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 387 PLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 566
P+ R+ +I++ + V A APV A E E+ A + +NK+ + +
Sbjct: 28 PVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQL 87
Query: 567 AILKSDQFDFLI 602
A+ ++ + L+
Sbjct: 88 AVRNDEELNKLL 99
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 25.4 bits (53), Expect(2) = 1.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 801 PPPPPXXPPXVPLEXRAVS 745
PPPPP PP P + +S
Sbjct: 512 PPPPPPPPPPPPALEQEIS 530
Score = 23.4 bits (48), Expect(2) = 1.7
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 807 RXPPPPPXXPP 775
+ PPPPP PP
Sbjct: 494 KSPPPPPPLPP 504
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -3
Query: 801 PPPPPXXPPXVPLEXRAVSRFEAANCSV---GPPDAAAPT 691
PPPPP PP +P E +S AA + PP + P+
Sbjct: 23 PPPPPPAPPALPRELTQISTETAAAVAALVRKPPPSLPPS 62
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +3
Query: 330 KVL-EDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLR 506
K+L E++ K+ ++ KT+ + + +++ DE++K + E ++ + + F ELT
Sbjct: 100 KILDEELDKLEAKISKTEESLVQSVSMLLEKDEQLKTIRKEMKIMDDERS-AFDQELTRL 158
Query: 507 AWSHTEENKRRTLQRNDIATAILKSD 584
S E K R + L D
Sbjct: 159 KTSRLENEKSSLASRVECTICYLSYD 184
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = -3
Query: 822 PPXX*RXPPPPPXXPPXVPLEXRAVSRFEAANCSVGPPDAAAPTGGSTDP 673
PP PPPPP P P + A + PP +P GS P
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = -3
Query: 822 PPXX*RXPPPPPXXPPXVPLEXRAVSRFEAANCSVGPPDAAAPTGGSTDP 673
PP PPPPP P P + A + PP +P GS P
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = -3
Query: 822 PPXX*RXPPPPPXXPPXVPLEXRAVSRFEAANCSVGPPDAAAPTGGSTDP 673
PP PPPPP P P + A + PP +P GS P
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 25.8 bits (54), Expect(2) = 4.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 801 PPPPPXXPPXVP 766
PPPPP PP +P
Sbjct: 791 PPPPPPPPPMLP 802
Score = 21.4 bits (43), Expect(2) = 4.5
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -3
Query: 822 PPXX*RXPPPPPXXPP 775
PP P PPP PP
Sbjct: 782 PPSPLTAPIPPPPPPP 797
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 25.8 bits (54), Expect(2) = 4.6
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 801 PPPPPXXPPXVP 766
PPPPP PP +P
Sbjct: 690 PPPPPPPPPMLP 701
Score = 21.4 bits (43), Expect(2) = 4.6
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -3
Query: 822 PPXX*RXPPPPPXXPP 775
PP P PPP PP
Sbjct: 681 PPSPLTAPIPPPPPPP 696
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 510 WSHTEEN-KRRTLQRNDIATAILKSDQFD 593
W+H EE +RR + ND + IL +QFD
Sbjct: 1217 WNHLEEELRRREVDLNDSMSQILIDEQFD 1245
>AC024808-4|AAK29924.1| 252|Caenorhabditis elegans Hypothetical
protein Y53G8AM.7 protein.
Length = 252
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 159 PMFLFNYHSKLILKLCFGKLL 97
PM +FN S L + +CFG LL
Sbjct: 122 PMIIFNTSSALSISICFGNLL 142
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 801 PPPPPXXPPXVPLEXRAVSRFEAANCSVGPPDAAAPTGGSTDP 673
PPPPP PP PL+ R + F + V + ++ T S+ P
Sbjct: 61 PPPPPANPP--PLKFRFKNLFNLGDQDVKKEEPSSMTPESSRP 101
>AC024776-4|AAK68465.2| 155|Caenorhabditis elegans Hypothetical
protein Y41D4B.15 protein.
Length = 155
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -2
Query: 178 TSRDKRTDVFIQLSLKINT*TMFW*ITLSSESNINT-VTNNQSIIWRSPIANY 23
+ RD T VF+ LK+ ++ S S + T T++ SI W +P NY
Sbjct: 42 SDRDDLTLVFLNQDLKMQNSQLYVPEMSSRVSGLETSATSSVSIYWNTPTENY 94
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +3
Query: 330 KVLED-IQKVNSEDFKTQALPLARIKKIMKLDEEVKMVSAEAPVLFAKAAEIFIHELTLR 506
K+L++ + K+ ++ KT+ + + +++ DE++K + E ++ + + F ELT
Sbjct: 100 KILDEKLDKLEAKISKTEESLVQSVSMLLEKDEQLKTIRKEMKIMDDERS-AFDQELTRL 158
Query: 507 AWSHTEENKRRTLQRNDIATAILKSD 584
S E K R + L D
Sbjct: 159 KTSRLENEKSSLASRVECTICYLSYD 184
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 822 PPXX*RXPPPPPXXPPXVP 766
PP PPPPP PP P
Sbjct: 134 PPPTPAAPPPPPPPPPPAP 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,796,672
Number of Sequences: 27780
Number of extensions: 313444
Number of successful extensions: 1481
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1389
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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