Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_J23
         (921 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74042-2|CAA98528.2|  379|Caenorhabditis elegans Hypothetical pr...    31   0.88 
Z19157-2|CAA79568.1|  826|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AF039045-8|AAB94199.1|  300|Caenorhabditis elegans Hypothetical ...    29   6.2  
AF039045-7|AAB94207.1|  333|Caenorhabditis elegans Hypothetical ...    29   6.2  

>Z74042-2|CAA98528.2|  379|Caenorhabditis elegans Hypothetical
           protein T11F9.3 protein.
          Length = 379

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
 Frame = +2

Query: 287 LYIKPIPKFWNAEKVKSFIQDKCKSRTIPENIKFVLLFIEDNGDPSCLVK---FANSYIC 457
           +Y+    K W+A  V++  +   ++ T+PE   F L   E +     + K   F   + C
Sbjct: 249 VYVLEAKKEWDASGVRNNYRKGIETNTMPEYTYFALTAPEGSTIEVRITKLSGFFCQHTC 308

Query: 458 NLALMELENVEIDGKRL--FINLDTDNLFNKKRNMNRNIF 571
           +   +EL+  + D + +   +  D DNL+NK R+   N F
Sbjct: 309 DYNGVELK-YKTDRRIVSPLVCCDNDNLWNKTRSSTNNPF 347


>Z19157-2|CAA79568.1|  826|Caenorhabditis elegans Hypothetical
           protein ZC84.3 protein.
          Length = 826

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -2

Query: 290 IIXLQSITLSLRRRTISFCLDRFLERTGERDRLRPYMTK 174
           II     T S  R+T+ +CL   + R GE+ R+ P+ TK
Sbjct: 765 IIKAYQSTSSTVRKTVVYCLVAMVNRVGEQ-RMTPHFTK 802


>AF039045-8|AAB94199.1|  300|Caenorhabditis elegans Hypothetical
           protein F15E11.2 protein.
          Length = 300

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = -2

Query: 722 QXLSXGRRSFAPLRCSRSFAAATGAIARLAVPDFGNLAFSGLTEFSVS 579
           + L  G  +   + C R+F  ++G++  L VP+  N+++S  TE  +S
Sbjct: 140 EMLELGLTNLTTIGC-RNFEISSGSLTNLNVPNLKNISYSLPTEGKIS 186


>AF039045-7|AAB94207.1|  333|Caenorhabditis elegans Hypothetical
           protein F15E11.11 protein.
          Length = 333

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = -2

Query: 722 QXLSXGRRSFAPLRCSRSFAAATGAIARLAVPDFGNLAFSGLTEFSVS 579
           + L  G  +   + C R+F  ++G++  L VP+  N+++S  TE  +S
Sbjct: 173 EMLELGLTNLTTIGC-RNFEISSGSLTNLNVPNLKNISYSLPTEGKIS 219


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,430,288
Number of Sequences: 27780
Number of extensions: 301526
Number of successful extensions: 706
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)