Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_J19
         (887 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069336-1|AAL39481.1|  258|Drosophila melanogaster LD05259p pro...    47   4e-05
AE014297-401|AAF51920.1|  258|Drosophila melanogaster CG10287-PA...    47   4e-05
AF070734-1|AAD09748.1|  218|Drosophila melanogaster Gasp precurs...    46   5e-05

>AY069336-1|AAL39481.1|  258|Drosophila melanogaster LD05259p
           protein.
          Length = 258

 Score = 46.8 bits (106), Expect = 4e-05
 Identities = 27/76 (35%), Positives = 35/76 (46%)
 Frame = +1

Query: 367 PPXSXPHWTRLYGYLPWMDTPCDVXXWX*ERRXPXXIXXAPXTPYDT*SXVXMWADQXPX 546
           PP + PH +RLYG  P  +  CDV  W      P     +P   YD  + V MWADQ P 
Sbjct: 86  PPITTPHCSRLYGIFP-DENKCDVF-WNCWNGEPSRYQCSPGLAYDRDARVCMWADQVPE 143

Query: 547 XIM*KLADRXXXPXXG 594
               ++A+    P  G
Sbjct: 144 CKNEEVANGFSCPAAG 159


>AE014297-401|AAF51920.1|  258|Drosophila melanogaster CG10287-PA
           protein.
          Length = 258

 Score = 46.8 bits (106), Expect = 4e-05
 Identities = 27/76 (35%), Positives = 35/76 (46%)
 Frame = +1

Query: 367 PPXSXPHWTRLYGYLPWMDTPCDVXXWX*ERRXPXXIXXAPXTPYDT*SXVXMWADQXPX 546
           PP + PH +RLYG  P  +  CDV  W      P     +P   YD  + V MWADQ P 
Sbjct: 86  PPITTPHCSRLYGIFP-DENKCDVF-WNCWNGEPSRYQCSPGLAYDRDARVCMWADQVPE 143

Query: 547 XIM*KLADRXXXPXXG 594
               ++A+    P  G
Sbjct: 144 CKNEEVANGFSCPAAG 159


>AF070734-1|AAD09748.1|  218|Drosophila melanogaster Gasp precursor
           protein.
          Length = 218

 Score = 46.4 bits (105), Expect = 5e-05
 Identities = 27/76 (35%), Positives = 35/76 (46%)
 Frame = +1

Query: 367 PPXSXPHWTRLYGYLPWMDTPCDVXXWX*ERRXPXXIXXAPXTPYDT*SXVXMWADQXPX 546
           PP + PH +RLYG  P  +  CDV  W      P     +P   YD  + V MWADQ P 
Sbjct: 86  PPITTPHCSRLYGIFP-DENKCDVF-WNCWNGEPSRYQCSPGLVYDRDARVCMWADQVPE 143

Query: 547 XIM*KLADRXXXPXXG 594
               ++A+    P  G
Sbjct: 144 CKNEEVANGFSCPAAG 159


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,200,931
Number of Sequences: 53049
Number of extensions: 138266
Number of successful extensions: 86
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)