Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_J18
(859 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_08_0079 + 28189782-28189907,28190445-28190553,28190876-281909... 71 2e-12
07_03_1626 + 28223967-28225294,28225506-28225779,28225939-282262... 56 3e-08
03_06_0323 + 33121062-33121653,33121748-33121839,33122482-331225... 52 6e-07
07_01_0075 - 558829-560859 40 0.003
06_01_0668 - 4882174-4884204 40 0.003
08_01_0387 - 3426058-3426168,3426279-3426473,3426612-3426724,342... 37 0.018
07_03_1353 - 25966332-25966421,25966477-25966528,25966612-259668... 37 0.018
05_03_0671 + 16831185-16831254,16832017-16832084,16832318-168323... 37 0.024
02_02_0136 + 7104633-7105247 32 0.67
08_01_0664 + 5741111-5741113,5741491-5741658,5741741-5741864,574... 31 1.6
06_03_1000 - 26778993-26779478 31 1.6
02_05_1148 - 34458732-34460627,34462299-34462547 31 1.6
01_03_0005 + 11568545-11569119,11569179-11569191 31 1.6
08_01_0078 - 551178-551897,552168-552197 30 2.1
12_02_0263 - 16551831-16551909,16552668-16553173 29 6.3
09_02_0543 + 10427321-10428315,10428440-10429154 29 6.3
08_02_0410 - 16842306-16842950,16844994-16845182 29 6.3
03_05_0990 - 29503950-29504462,29504567-29504686,29514956-295150... 29 6.3
01_06_1377 + 36764461-36765339 29 6.3
10_03_0005 + 6920750-6920848,6921283-6921390,6921516-6921564,692... 28 8.3
07_01_0862 - 7172083-7172931 28 8.3
06_03_1055 - 27234824-27234838,27236087-27236125,27236322-272373... 28 8.3
03_06_0759 - 36059872-36059928,36059934-36060125,36060241-360603... 28 8.3
01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453... 28 8.3
>11_08_0079 +
28189782-28189907,28190445-28190553,28190876-28190958,
28191500-28191562,28191658-28192854,28193247-28193310,
28193338-28193426,28194404-28194463,28195442-28195547,
28196057-28196069,28196940-28197111
Length = 693
Score = 70.5 bits (165), Expect = 2e-12
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = +2
Query: 656 VAGVPNAGKSTVLRAISRARXNVAPYPFTTLXPXIGTILYDDYXQVXXADXXGXXLXXHE 835
+ G+PNAGKST+L A+SRAR +A Y FTTL P IG++ Y+DY V AD G HE
Sbjct: 344 LVGMPNAGKSTLLSALSRARPEIADYAFTTLRPNIGSLTYEDYFSVKVADIPGLIKGAHE 403
Score = 52.0 bits (119), Expect = 6e-07
Identities = 31/103 (30%), Positives = 46/103 (44%)
Frame = +3
Query: 150 KPKSTRDTVQHYVDSFRVRTVGGNGGDGCISFLSVWCKDHAXXXXXXXXXXXHVIFKATN 329
KPK+ + VD FR+R GG+GG+GCIS VI + +
Sbjct: 35 KPKTAPLQSRGMVDRFRLRAKGGDGGNGCISLRRSRSDRQGKPDGGNGGRGGDVILECSR 94
Query: 330 SVRSLNHCKAVIQAKPGEKGFNKDCSGKNAGHVIVNVPIGTII 458
SV + + ++A G G +K+ G I VP+GT+I
Sbjct: 95 SVWDFSGLQHHMKASRGANGVSKNQIGTRGSDKIAQVPVGTVI 137
>07_03_1626 +
28223967-28225294,28225506-28225779,28225939-28226230,
28226492-28226651,28226809-28226917,28227004-28227099
Length = 752
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/59 (45%), Positives = 34/59 (57%)
Frame = +2
Query: 656 VAGVPNAGKSTVLRAISRARXNVAPYPFTTLXPXIGTILYDDYXQVXXADXXGXXLXXH 832
+ G PNAGKST+L AIS A+ +A YPFTTL P +G + D + AD G H
Sbjct: 457 IVGAPNAGKSTLLTAISAAKPTIANYPFTTLLPNLGVVSLDFDATMVVADLPGLLEGAH 515
Score = 55.2 bits (127), Expect = 6e-08
Identities = 46/191 (24%), Positives = 79/191 (41%), Gaps = 3/191 (1%)
Frame = +3
Query: 174 VQHYVDSFRVRTVGGNGGDGCISFLSVWCKDHAXXXXXXXXXXXHVIFKATNSVRSLNHC 353
V D+ ++ G+GG+G ++F +V + + SL
Sbjct: 293 VMRCFDTAKIYAKAGDGGNGVVAFRREKYVPLGGPSGGDGGRGGNVFVEVDGDMNSLLPF 352
Query: 354 KAVI--QAKPGEKGFNKDCSGKNAGHVIVNVPIGTIIKNQNGRV-IGDLDREGLMFVXXX 524
+ + +A G G + +G V+V VP GT++++ G V + +L R G +
Sbjct: 353 RKSVHFRAGRGAHGQGRQQAGAKGDDVVVKVPPGTVVRSAAGDVELLELMRPGQRALLLP 412
Query: 525 XXXXXXXNKFFLTDTEQAPDIAEFGAAGETNIYHLEVRSLAHVGLLGSRMPGRAPC*EPY 704
N F + T +AP IAE G G LE++ +A VG++G+ G++
Sbjct: 413 GGRGGRGNAAFKSGTNKAPRIAEKGEKGPEMWIDLELKLVADVGIVGAPNAGKSTLLTAI 472
Query: 705 RARGPTSHRIP 737
A PT P
Sbjct: 473 SAAKPTIANYP 483
>03_06_0323 +
33121062-33121653,33121748-33121839,33122482-33122565,
33123126-33123203,33123500-33123700,33123821-33123928,
33124145-33124219,33124338-33124537,33124654-33124722,
33125159-33125279,33126840-33127120,33127522-33127594
Length = 657
Score = 52.0 bits (119), Expect = 6e-07
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +2
Query: 656 VAGVPNAGKSTVLRAISRARXNVAPYPFTTLXPXIGTI 769
+ G+PNAGKST+L AI+ AR ++A YPFTTL P +G +
Sbjct: 281 LVGLPNAGKSTLLSAITLARPDIADYPFTTLMPNLGRL 318
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 417 AGHVI-VNVPIGTIIKNQNGRVIGDLDREG 503
AG + + VP+GT++K + G V+ DL G
Sbjct: 187 AGETLRIPVPVGTVVKRKKGAVLADLAHPG 216
>07_01_0075 - 558829-560859
Length = 676
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/65 (36%), Positives = 31/65 (47%)
Frame = +2
Query: 620 LPSGGTLTGPRRVAGVPNAGKSTVLRAISRARXNVAPYPFTTLXPXIGTILYDDYXQVXX 799
LPS T + G PN GKS+ + I+RA +V PY FTT +G Y Y +
Sbjct: 161 LPSIDPNTRTLLICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHADY-KYLRYQV 219
Query: 800 ADXXG 814
D G
Sbjct: 220 IDTPG 224
>06_01_0668 - 4882174-4884204
Length = 676
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/65 (36%), Positives = 31/65 (47%)
Frame = +2
Query: 620 LPSGGTLTGPRRVAGVPNAGKSTVLRAISRARXNVAPYPFTTLXPXIGTILYDDYXQVXX 799
LPS T + G PN GKS+ + I+RA +V PY FTT +G Y Y +
Sbjct: 161 LPSIDPNTRTLLICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHADY-KYLRYQV 219
Query: 800 ADXXG 814
D G
Sbjct: 220 IDTPG 224
>08_01_0387 -
3426058-3426168,3426279-3426473,3426612-3426724,
3427121-3427157,3427270-3427341,3427849-3427962,
3428129-3428200,3428343-3428381,3429340-3429414,
3429561-3429674,3429749-3429813,3429927-3430047,
3430942-3431063,3431547-3431634
Length = 445
Score = 37.1 bits (82), Expect = 0.018
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 656 VAGVPNAGKSTVLRAISRARXNVAPYPFTTLXPXIGTIL 772
+ G PN GKS+++R +S + V YPFTT +G I+
Sbjct: 249 LVGSPNVGKSSLVRILSSGKPEVCSYPFTTRGILMGHIV 287
>07_03_1353 -
25966332-25966421,25966477-25966528,25966612-25966803,
25966900-25967199,25967816-25967925,25968696-25968755,
25968835-25968906,25969172-25969348,25969845-25969898,
25970188-25970217,25970985-25971026
Length = 392
Score = 37.1 bits (82), Expect = 0.018
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 635 TLTGPRRVA--GVPNAGKSTVLRAISRARXNVAPYPFTTLXPXIGTILY 775
T +G RV G P+ GKST+L ++ VA Y FTTL G I+Y
Sbjct: 71 TKSGDARVGLVGFPSVGKSTLLNKLTGTFSEVAAYEFTTLTCIPGVIMY 119
>05_03_0671 +
16831185-16831254,16832017-16832084,16832318-16832394,
16832910-16833090,16833192-16833248,16834182-16834256,
16834820-16834939,16835018-16835224
Length = 284
Score = 36.7 bits (81), Expect = 0.024
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 635 TLTGPRRVA--GVPNAGKSTVLRAISRARXNVAPYPFTTLXPXIGTILYDD 781
T G RVA G P+ GKST+L ++ A Y FTTL G I Y+D
Sbjct: 58 TKFGHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIQYND 108
>02_02_0136 + 7104633-7105247
Length = 204
Score = 31.9 bits (69), Expect = 0.67
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 563 GHRTGSGHSRVRGCRRNKHLPSGGTLTGPRRVAGVPNAG 679
GHR G S R CR HLP+ G+ T + +AG
Sbjct: 18 GHRRHRGSSSERSCRAPSHLPAPGSATETGGRGSIEDAG 56
>08_01_0664 +
5741111-5741113,5741491-5741658,5741741-5741864,
5742078-5742169,5742254-5742352,5742476-5742589,
5743190-5743254,5743342-5743467,5743870-5743945,
5744502-5744594,5744944-5744994,5745084-5745182
Length = 369
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2
Query: 656 VAGVPNAGKSTVLRAISRARXNVAPYPFTTLXPXIGTILYDD 781
+ G+PN GKST +++ +PF T+ P + D
Sbjct: 1 MVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPD 42
>06_03_1000 - 26778993-26779478
Length = 161
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 512 CCGAGWGGRXRKQIFPHGH 568
CCG G GGR R+ FP H
Sbjct: 111 CCGGGGGGRPRRPFFPVPH 129
>02_05_1148 - 34458732-34460627,34462299-34462547
Length = 714
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 623 PSGGTLTGPRRVAGVPNAGKSTVLRAISRARXNVAPYPFTTLXPXIGTILYDD 781
P G P V G N G+ T+LR + RAR + + T+L P +++D
Sbjct: 147 PQGSARINP--VNGHQNGGQMTILRPLPRARSSGRLHHMTSLLPDTDRSIFND 197
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 540 YLPPHPAPQQTSTPPCPNPQS 478
Y PP P P T TP CP P S
Sbjct: 54 YYPPPPPPVVTPTPQCPPPPS 74
>08_01_0078 - 551178-551897,552168-552197
Length = 249
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 440 TNRYNNKKPKWSSDWGFGQGGVDVCCGAGWGGRXRKQIFPHGH 568
TN + ++ WSS G G G VC G+ R + P GH
Sbjct: 159 TNVFQEERTSWSSRSGHGDGS-RVCSYGQVVGKGRSMVLPIGH 200
>12_02_0263 - 16551831-16551909,16552668-16553173
Length = 194
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -2
Query: 570 LCP*GKICFLYLPPHPAPQQTSTPPCPNPQ 481
L P G I F PP P PQ PP P PQ
Sbjct: 72 LRPLGPIRFQQ-PPQPQPQPPQPPPQPQPQ 100
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 534 PPHPAPQQTSTPPCPNPQS 478
PP PAP PP P PQS
Sbjct: 36 PPPPAPDMPPPPPTPAPQS 54
>08_02_0410 - 16842306-16842950,16844994-16845182
Length = 277
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +2
Query: 485 GFGQGGVDVCCGAGWGGRXRKQIFPHGHRTGSGHSRVRGCRR 610
G G GGV VC +G GG + G R G SR RG +R
Sbjct: 209 GGGAGGVGVCARSGEGGGGWRA--KKGGRGGGDGSRRRGKKR 248
>03_05_0990 -
29503950-29504462,29504567-29504686,29514956-29515012,
29515635-29515689,29515765-29515845,29515928-29515983,
29516112-29516256,29516347-29516415,29517355-29517467,
29517619-29517708,29518112-29518176,29519256-29519667
Length = 591
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 593 VRGCRRNKHLPSGGTLTGPRRVAGVPNAGKSTVLRAISRARXNVAPYPFTTLXPXIGTIL 772
++ R +H S G V G NAGKST++ A+S F T+ P + +++
Sbjct: 271 IQRSNRKRHGNSFGQELVTVAVVGYTNAGKSTLVSALSETDLYSDDRLFATVDPRLRSVI 330
>01_06_1377 + 36764461-36765339
Length = 292
Score = 28.7 bits (61), Expect = 6.3
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Frame = -2
Query: 729 GATLXRARDMALSTVLFPAFGTPATR--RGPVSVP---PDGKCLFRL--QPRTLLCPEPV 571
G+ RD+ ST P+ +PA+ P+ P P GK RL + R+ PEP
Sbjct: 102 GSARSPLRDLLFSTNPNPSPDSPASALITLPLLRPSGRPQGKLRIRLALRERSPPPPEPQ 161
Query: 570 LCP*GKICFLYLPPHPAPQQTSTPP 496
P + Y PP P P ++ PP
Sbjct: 162 YPPPSSSPY-YFPPPPPPAYSAPPP 185
>10_03_0005 +
6920750-6920848,6921283-6921390,6921516-6921564,
6921649-6921699,6921790-6921947
Length = 154
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 114 TVITCLSRSXSLKPKSTRDTVQHYVDSFRVRTVGGNGGDG 233
+ I+CL R +KPK+T + +H + ++ GG+ DG
Sbjct: 80 STISCLGRQNLMKPKATSFSDEH-ISQDNNKSSGGHRNDG 118
>07_01_0862 - 7172083-7172931
Length = 282
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -2
Query: 606 LQPRTLLCPEPVLCP*GKICFLYLPPHPAPQQTSTPPCPNPQ 481
L PR P+ P K LY PP P ++ PP P PQ
Sbjct: 150 LPPRKKAMLFPLPLPPRKKPLLYPPPLPPKKKPLPPPSPPPQ 191
>06_03_1055 -
27234824-27234838,27236087-27236125,27236322-27237388,
27237422-27237630,27237650-27238053
Length = 577
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 584 HSRVRGCRRNKHLPSGGTLTGPRRVAGVPNA 676
H R R C+R + LP GG + RVA + A
Sbjct: 157 HDRRRRCQRPRLLPDGGKIKAALRVAALKAA 187
>03_06_0759 -
36059872-36059928,36059934-36060125,36060241-36060348,
36060440-36060712,36060923-36061009,36061085-36061276,
36061841-36061969,36062087-36062200,36062446-36062490,
36062785-36062956,36063229-36063515,36063989-36064456
Length = 707
Score = 28.3 bits (60), Expect = 8.3
Identities = 37/134 (27%), Positives = 50/134 (37%), Gaps = 1/134 (0%)
Frame = +2
Query: 440 TNRYNNKKPKWSSDWGFGQGGVDVCCGAGWGGRXRKQIFPHGHRTGSGHSRVRGCRRNKH 619
T Y + P SS +GG GA + R+GSG + R + +
Sbjct: 45 TTAYPSPSPTPSSSSAACRGGERKVAGATLVWKELSVSLTRS-RSGSGSADRRVVKSSTG 103
Query: 620 LPSGGTLTGPRRVAGVPNAGKSTVLRAIS-RARXNVAPYPFTTLXPXIGTILYDDYXQVX 796
GTLT + G +GKST+LRAI+ R R Y L + Y Y V
Sbjct: 104 YALPGTLTV---IMGPARSGKSTLLRAIAGRLRPAERMYGQVLLNATNTRLPYGSYGFVD 160
Query: 797 XADXXGXXLXXHEL 838
D L E+
Sbjct: 161 RHDVLIDSLTVREM 174
>01_04_0053 -
15444421-15444747,15444905-15445116,15445198-15445377,
15445572-15445836,15446308-15446522,15446611-15446784,
15446872-15447010,15447523-15447786
Length = 591
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 656 VAGVPNAGKSTVLRAISRAR-XNVAPYPFTT 745
+ G+PN GKS+++ ++ R+R NV P T
Sbjct: 273 IVGLPNVGKSSLINSLKRSRVVNVGSTPGVT 303
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,353,731
Number of Sequences: 37544
Number of extensions: 515945
Number of successful extensions: 2552
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2519
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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