Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_J18
(859 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical pr... 114 9e-26
AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical... 39 0.005
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 39 0.005
L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical p... 36 0.037
U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical pr... 36 0.049
Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical pr... 35 0.085
AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical... 35 0.085
Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical pr... 33 0.20
AF250045-1|AAG17620.1| 246|Caenorhabditis elegans thioredoxin-l... 29 3.2
AF125955-2|AAD14719.1| 246|Caenorhabditis elegans Dumpy : short... 29 3.2
Z34799-7|CAA84320.2| 574|Caenorhabditis elegans Hypothetical pr... 29 5.6
AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical ... 29 5.6
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 28 7.4
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 28 7.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 9.8
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ... 28 9.8
>Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical
protein M01E5.2 protein.
Length = 358
Score = 114 bits (274), Expect = 9e-26
Identities = 63/193 (32%), Positives = 103/193 (53%), Gaps = 2/193 (1%)
Frame = +3
Query: 114 TVITCLSRSXSLKPKSTRDTVQ--HYVDSFRVRTVGGNGGDGCISFLSVWCKDHAXXXXX 287
T + LS+ L PK + + ++D RVR GNGG+G +SF + K
Sbjct: 11 TACSVLSKRPILSPKKPKSEGEATSFIDYRRVRCQAGNGGNGMVSFFRGYRKPFGGPDGG 70
Query: 288 XXXXXXHVIFKATNSVRSLNHCKAVIQAKPGEKGFNKDCSGKNAGHVIVNVPIGTIIKNQ 467
HV+F+A+ S + L+ ++++A+ GE G +K C GK+A H V VP+GT+ K
Sbjct: 71 DGGHGGHVVFRASRSSKDLSTVHSIVRAQNGEFGRSKSCHGKSADHKEVEVPLGTVFK-A 129
Query: 468 NGRVIGDLDREGLMFVXXXXXXXXXXNKFFLTDTEQAPDIAEFGAAGETNIYHLEVRSLA 647
+G I +L+ E MF+ N+F++++ + P AE+G GE IY +E+R +A
Sbjct: 130 DGNTIFELNNENDMFIAARGGVGGRGNQFYVSNEVRKPFKAEYGGEGEELIYDVEMRVMA 189
Query: 648 HVGLLGSRMPGRA 686
GL+G G++
Sbjct: 190 TAGLVGFPNAGKS 202
Score = 71.7 bits (168), Expect = 6e-13
Identities = 32/59 (54%), Positives = 40/59 (67%)
Frame = +2
Query: 656 VAGVPNAGKSTVLRAISRARXNVAPYPFTTLXPXIGTILYDDYXQVXXADXXGXXLXXH 832
+ G PNAGKS++LRAISRA+ VA YPFTTL P IG + Y+D+ Q+ AD G H
Sbjct: 193 LVGFPNAGKSSLLRAISRAKPKVASYPFTTLHPHIGVVFYEDFEQIAVADIPGLIEDSH 251
>AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical
protein T07A9.9b protein.
Length = 633
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2
Query: 620 LPSGGTLTGPRRVAGVPNAGKSTVLRAISRARXNVAPYPFTTLXPXIGTILY 775
LPS T + G PN GKS+ + ++RA V PY FTT +G + Y
Sbjct: 162 LPSIDPATRTLILCGFPNVGKSSFINNVTRADVEVQPYAFTTKALYVGHLDY 213
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2
Query: 620 LPSGGTLTGPRRVAGVPNAGKSTVLRAISRARXNVAPYPFTTLXPXIGTILY 775
LPS T + G PN GKS+ + ++RA V PY FTT +G + Y
Sbjct: 162 LPSIDPATRTLILCGFPNVGKSSFINNVTRADVEVQPYAFTTKALYVGHLDY 213
>L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical
protein C02F5.3 protein.
Length = 366
Score = 35.9 bits (79), Expect = 0.037
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 641 TGPRRVA--GVPNAGKSTVLRAISRARXNVAPYPFTTLXPXIGTILYD 778
+G RVA G P+ GKST+L +++ A Y FTTL G I Y+
Sbjct: 60 SGDARVAMVGFPSVGKSTLLSSMTSTHSEAAGYEFTTLTCIPGVISYN 107
>U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical
protein C26E6.12 protein.
Length = 390
Score = 35.5 bits (78), Expect = 0.049
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 662 GVPNAGKSTVLRA-ISRARXNVAPYPFTTLXPXI 760
G PNAGKST+L+A + +A Y FTT+ P +
Sbjct: 168 GFPNAGKSTLLKALVPEKSVKIADYAFTTVNPQV 201
>Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 34.7 bits (76), Expect = 0.085
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 641 TGPRRVA--GVPNAGKSTVLRAISRARXNVAPYPFTTLXPXIGTILY 775
TG R+ G P+ GKST+L ++ VA Y FTTL G I Y
Sbjct: 60 TGDARIGFVGFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIRY 106
>AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 34.7 bits (76), Expect = 0.085
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 641 TGPRRVA--GVPNAGKSTVLRAISRARXNVAPYPFTTLXPXIGTILY 775
TG R+ G P+ GKST+L ++ VA Y FTTL G I Y
Sbjct: 60 TGDARIGFVGFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIRY 106
>Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical
protein W08E3.3 protein.
Length = 395
Score = 33.5 bits (73), Expect = 0.20
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 656 VAGVPNAGKSTVLRAISRARXNVAPYPFTTLXPXIGTILYDD 781
+ G+PN GKST ++++ +PF T+ P + D
Sbjct: 26 ILGLPNVGKSTFFNVLTKSEAQAENFPFCTIDPNESRVAVQD 67
>AF250045-1|AAG17620.1| 246|Caenorhabditis elegans thioredoxin-like
protein DPY-11 protein.
Length = 246
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/67 (28%), Positives = 24/67 (35%)
Frame = +2
Query: 419 WTRHCQCTNRYNNKKPKWSSDWGFGQGGVDVCCGAGWGGRXRKQIFPHGHRTGSGHSRVR 598
W C+ + N WS D G G VDV G GR P + G R
Sbjct: 50 WCPACKDLQKAWNAFADWSDDLGIKVGEVDVTVNPGLSGRFLVTALPTIYHVKDGVFRQY 109
Query: 599 GCRRNKH 619
R+K+
Sbjct: 110 SGARDKN 116
>AF125955-2|AAD14719.1| 246|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 11 protein.
Length = 246
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/67 (28%), Positives = 24/67 (35%)
Frame = +2
Query: 419 WTRHCQCTNRYNNKKPKWSSDWGFGQGGVDVCCGAGWGGRXRKQIFPHGHRTGSGHSRVR 598
W C+ + N WS D G G VDV G GR P + G R
Sbjct: 50 WCPACKDLQKAWNAFADWSDDLGIKVGEVDVTVNPGLSGRFLVTALPTIYHVKDGVFRQY 109
Query: 599 GCRRNKH 619
R+K+
Sbjct: 110 SGARDKN 116
>Z34799-7|CAA84320.2| 574|Caenorhabditis elegans Hypothetical
protein F34D10.2 protein.
Length = 574
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 245 EGYAAVTSISSDSPNAKGIYIMLNCISSR 159
EG+++V I +DS K YI++NC ++R
Sbjct: 56 EGWSSVEKIFADSQEQKCHYILINCGATR 84
>AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical
protein Y56A3A.4 protein.
Length = 342
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 531 PHPAPQQTSTPPCPNPQSLDHF 466
P+P+PQ + PP P Q HF
Sbjct: 81 PYPSPQMRAGPPPPQQQQQQHF 102
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 449 YNNKKPKWSSDWGFGQGGVDVCCGAGWGG 535
+ N P S WG G+GG G GWGG
Sbjct: 701 WGNNDPWGGSRWGGGRGGWG---GGGWGG 726
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 534 PPHPAPQQTSTPPCPNP 484
PP P P T+TPP P P
Sbjct: 150 PPCPYPPATNTPPAPEP 166
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = -2
Query: 645 PVSVPPDGKCLFRLQPRTLLCPEPVLCP*GKICFLYLPPHPAPQQTSTPPCPNP 484
P+ PP C P +CP P CP +C PP P P PP P P
Sbjct: 36 PMCAPPPLPC-----PPPPICP-PQFCPPPPMCPPPPPP-PPPPMCPPPPPPMP 82
>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
protein Y108G3AL.7 protein.
Length = 1192
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 581 RSLFCVREEKFVSXTSRPTPRRNKHQPLPVQIPN 480
RS+ + E KF+ RP+ RR K P+PVQ P+
Sbjct: 624 RSIRSILEWKFI----RPSSRRLKITPIPVQAPS 653
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,716,581
Number of Sequences: 27780
Number of extensions: 397702
Number of successful extensions: 1443
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1437
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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