Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_J14
(835 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0385 + 2783387-2783695,2784149-2785082,2785206-2785309,278... 35 0.092
08_02_1569 - 27924930-27925034,27925149-27925167,27925271-279254... 31 0.86
05_03_0061 + 7912322-7912658,7914617-7914747,7914875-7914938,791... 31 0.86
02_02_0402 - 9852407-9853519 31 1.5
02_01_0292 + 1949926-1950037,1950121-1950250,1950551-1950616,195... 30 2.0
09_04_0308 + 16567361-16568854,16568946-16569068,16569372-165696... 30 2.6
07_01_0835 - 6780994-6781677,6784173-6785969,6787362-6787595 29 3.5
11_06_0315 + 22318155-22318210,22319743-22319769,22319868-223199... 29 4.6
09_06_0132 - 21042653-21042873,21042950-21043027,21043106-210431... 29 4.6
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002... 29 4.6
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 29 6.0
03_05_0062 + 20370608-20370977,20371062-20371541,20371661-203717... 29 6.0
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 28 8.0
03_02_0102 + 5637469-5639064 28 8.0
>02_01_0385 + 2783387-2783695,2784149-2785082,2785206-2785309,
2785402-2785486,2785517-2787578,2787732-2787753,
2788157-2788327,2791473-2791517,2792558-2793874,
2793962-2794012,2794090-2794188,2794352-2794504,
2794554-2794571
Length = 1789
Score = 34.7 bits (76), Expect = 0.092
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 3/139 (2%)
Frame = +1
Query: 166 NCVSVYECQALLAILNNQRRTQQDEKFLRDSQCGTKNSVPAVCCPC-NAADGQQGNCVNI 342
N S +E +AL N R Q FL S C NS+P CC + A +C N+
Sbjct: 632 NLASCHELEALPMSFGNLNRLQ----FLSLSDCYKLNSLPESCCQLHDLAHLDLSDCYNL 687
Query: 343 NSCPYVLQLLKNPNEANLNYVRGSVCQGSE--QQSICCVTAPQSTAVTTTPRPKRVHACQ 516
P + L + L Y+ + C + +S+C +T + ++ R + + +C
Sbjct: 688 GKLPDCIDQL-----SKLEYLNMTSCSKVQALPESLCKLTMLRHLNLSYCLRLENLPSCI 742
Query: 517 SEMTATPPNPEGKCCGRDI 573
++ + +G RD+
Sbjct: 743 GDLQLQSLDIQGSFLLRDL 761
>08_02_1569 -
27924930-27925034,27925149-27925167,27925271-27925490,
27925925-27925971,27926502-27927025
Length = 304
Score = 31.5 bits (68), Expect = 0.86
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = -3
Query: 689 SAPPQSSI----VLSSLTYSMTTSQGYESMDAGAPPTILSPTAMSRPQHFPSGLGGVAV 525
SAPP SS S+ S ++S GY G P + P S Q +P G+GG V
Sbjct: 17 SAPPASSYGYTTTPSAPPASSSSSYGYGHGGGGYPSSTYPPPPPSSSQAYPMGMGGFLV 75
>05_03_0061 +
7912322-7912658,7914617-7914747,7914875-7914938,
7915286-7915512,7915869-7916396,7916860-7916919
Length = 448
Score = 31.5 bits (68), Expect = 0.86
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +3
Query: 567 GHSRRRQNRWWCARIHRLV-SLAGGH 641
GH + + RWW A + ++V SLAGGH
Sbjct: 78 GHGCQGEPRWWSAAMEKVVHSLAGGH 103
>02_02_0402 - 9852407-9853519
Length = 370
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 454 TAPQSTAVTTTPRPKRVHACQSEMTATPPNPEGKCCGRDIAV 579
+ P+S++ ++ RPK VH Q++ PP P+ R A+
Sbjct: 161 SGPESSSTASSKRPKTVHRQQNKSPLPPPPPKRAARARFAAI 202
>02_01_0292 +
1949926-1950037,1950121-1950250,1950551-1950616,
1950718-1950789,1951198-1951607,1951789-1951994,
1952121-1952407,1952527-1952665,1952746-1953141
Length = 605
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 735 SFHAMTGSEHVLPADERPATEQHRPXEPHILDDHQPRIRVDGCG 604
+ A E++ +R QH E H+L D + R+RV GCG
Sbjct: 420 ALEAAKALEYLHEGGQRQVVHQHFRPE-HVLVDGEMRVRVSGCG 462
>09_04_0308 +
16567361-16568854,16568946-16569068,16569372-16569649,
16570316-16571924,16572363-16573781
Length = 1640
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 695 LMSAPPQSSIVLSSLTYSMTTSQGYESMDAGAPPTILSPTAMSRPQH 555
L+S+PP + LS L S+ S G DAGA +P+ P H
Sbjct: 75 LLSSPPPPRLTLS-LPRSVAVSGGGGGHDAGAAAAAATPSVSLSPNH 120
>07_01_0835 - 6780994-6781677,6784173-6785969,6787362-6787595
Length = 904
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = -3
Query: 614 MDAGAPPTILSPTAMSRPQHFPSGL--GGVAVISLWQACTRFGLGVVVTAVDCGAVTQHM 441
+DA A P + A+ R H + GG V+S W+ F + +VV V H
Sbjct: 810 VDAAADPAAQAGVALFRKLHARTTTTEGGAVVVSAWKELADFWVRMVVYLAPSSDVEGHA 869
Query: 440 LCCSD 426
+ +D
Sbjct: 870 MALAD 874
>11_06_0315 +
22318155-22318210,22319743-22319769,22319868-22319990,
22320867-22321110,22321487-22321981
Length = 314
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 269 VPHWESLKNFSSCWVLL*LFNMARSAWHSY 180
+P W S+K CW++L FN A + +Y
Sbjct: 70 LPFWPSMKLIFICWLVLPYFNGAAFVYQNY 99
>09_06_0132 -
21042653-21042873,21042950-21043027,21043106-21043167,
21043504-21043578,21043664-21043752,21043825-21043905,
21044939-21045076,21046299-21046429,21046521-21046592,
21047218-21047275,21047362-21047461,21047544-21047617,
21047701-21047836,21047913-21048137,21048211-21048446,
21048949-21049081,21049195-21049484
Length = 732
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = +1
Query: 256 SQCGTKNSVPAVCCPCNAADGQQGNCVNINSCPYVLQLLKNPNEANLNYVRGSVCQGSEQ 435
+Q T VP C N D Q NSCPY +Q L + ++ V + S+
Sbjct: 151 AQSTTSRKVP---CSSNLCDLQNACRSKSNSCPYSIQYLSDNTSSSGVLVEDVLYLTSDS 207
Query: 436 QSICCVTAP 462
VTAP
Sbjct: 208 AQSKIVTAP 216
>04_04_1466 -
33799104-33799229,33799659-33799669,33800052-33800200,
33800261-33800299,33800690-33800746,33800839-33801628,
33801705-33801980,33802051-33802117,33802211-33802285,
33802618-33802812,33802927-33803076,33803152-33803522,
33804070-33804193,33804246-33804275,33804306-33804417,
33804919-33804985,33805138-33805180,33805768-33805872
Length = 928
Score = 29.1 bits (62), Expect = 4.6
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 496 KRVHACQSEMTATPPNPEGKCCGRDIA 576
+++H+C+S M+ +PP + C +D A
Sbjct: 802 RKLHSCKSSMSPSPPKSRNRQCLKDTA 828
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +1
Query: 490 RPKRVHACQSEMTATPPNPEGKCCGRDIAVGDKIVGGAPASIDSYPWLVVIEYVRLXRTM 669
RP RV AC + T TPP P A ++ + A ++ +V Y R R +
Sbjct: 30 RPSRVTACLATPTPTPPPPTSAPLAPAAAARRELSAASRAVVEDEARYIVGTYNR-SRVV 88
Query: 670 LLCG 681
L+ G
Sbjct: 89 LVAG 92
>03_05_0062 +
20370608-20370977,20371062-20371541,20371661-20371731,
20371836-20371912,20372076-20372223,20372346-20372507,
20372743-20372940
Length = 501
Score = 28.7 bits (61), Expect = 6.0
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = -3
Query: 713 VSTYFPLMSAPP----QSSIVLSSLTYSMTTSQGYESMDAGAPPTILSPTAMSRPQHFPS 546
++T P + PP S I+ SSLT + T+ ++ AGAPP +P+ + + PS
Sbjct: 15 ITTQAPPIQPPPPPGGNSMIMPSSLTTAGTSQSPPDATTAGAPPP-PAPSVGAWGGNVPS 73
Query: 545 GL 540
GL
Sbjct: 74 GL 75
>12_02_0522 - 19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 28.3 bits (60), Expect = 8.0
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = -2
Query: 714 SEHVLPAD---ERPATEQHRPXEPHILDDHQPRIRVDGCGRTTNDFVSDGYVPAATLPFR 544
+ H PA+ +R + P E + DH + DG G ++D +V
Sbjct: 1019 ASHAQPAEMNLQRDSPVSSEPIEAELAGDHGEEL--DGRGNELE--LADDHVE------E 1068
Query: 543 IRGGGSHLALAGVHPLRSGGRG 478
+ GG+ L LAG H GGRG
Sbjct: 1069 LDSGGNELELAGDHREELGGRG 1090
>03_02_0102 + 5637469-5639064
Length = 531
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 262 IGSPSRTSHLAGFSSDYLIWPGVPGIHTRIRNY 164
IG P + HL + +P VP +T IRN+
Sbjct: 299 IGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNF 331
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,533,779
Number of Sequences: 37544
Number of extensions: 630286
Number of successful extensions: 1948
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1947
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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