Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_J13
         (872 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC009855-1|AAH09855.1|  475|Homo sapiens LTV1 homolog (S. cerevi...   131   4e-30
AL049844-1|CAI21442.1|  475|Homo sapiens LTV1 homolog (S. cerevi...   131   4e-30
AY326463-1|AAR99513.1|   74|Homo sapiens putative protein STRF7 ...    37   0.11 
AF402000-1|AAM73764.1| 2542|Homo sapiens talin 2 protein.              31   5.5  
BC022348-1|AAH22348.1|  125|Homo sapiens KIAA1598 protein protein.     31   7.2  
AK001984-1|BAA92019.1|  125|Homo sapiens protein ( Homo sapiens ...    31   7.2  

>BC009855-1|AAH09855.1|  475|Homo sapiens LTV1 homolog (S.
           cerevisiae) protein.
          Length = 475

 Score =  131 bits (316), Expect = 4e-30
 Identities = 76/150 (50%), Positives = 92/150 (61%), Gaps = 1/150 (0%)
 Frame = +1

Query: 145 VTFNLVHRSQRDPLAADETAPQRVLVPVNTIIPPTKDKDTEYTPEQRKEEQRKYGIYYDD 324
           V+F+LVHRSQRDPLAADE+APQRVL+P   I             E+R+ EQRKYG+++DD
Sbjct: 16  VSFHLVHRSQRDPLAADESAPQRVLLPTQKI-----------DNEERRAEQRKYGVFFDD 64

Query: 325 DYNYLQHLKDTKEVTLVLQPKTPHKKKPXXXXXXXXXXXXXXXXXXXVTERLMLPSSVFA 504
           DY+YLQHLK         +P  P +  P                    +  + LPSSVFA
Sbjct: 65  DYDYLQHLK---------EPSGPSELIPSSTFSAHNRREEKEETLVIPSTGIKLPSSVFA 115

Query: 505 SEFEEDVGLLNKAAP-QGLRLDLDPEVVAA 591
           SEFEEDVGLLNKAAP  G RLD DP++VAA
Sbjct: 116 SEFEEDVGLLNKAAPVSGPRLDFDPDIVAA 145


>AL049844-1|CAI21442.1|  475|Homo sapiens LTV1 homolog (S.
           cerevisiae) protein.
          Length = 475

 Score =  131 bits (316), Expect = 4e-30
 Identities = 76/150 (50%), Positives = 92/150 (61%), Gaps = 1/150 (0%)
 Frame = +1

Query: 145 VTFNLVHRSQRDPLAADETAPQRVLVPVNTIIPPTKDKDTEYTPEQRKEEQRKYGIYYDD 324
           V+F+LVHRSQRDPLAADE+APQRVL+P   I             E+R+ EQRKYG+++DD
Sbjct: 16  VSFHLVHRSQRDPLAADESAPQRVLLPTQKI-----------DNEERRAEQRKYGVFFDD 64

Query: 325 DYNYLQHLKDTKEVTLVLQPKTPHKKKPXXXXXXXXXXXXXXXXXXXVTERLMLPSSVFA 504
           DY+YLQHLK         +P  P +  P                    +  + LPSSVFA
Sbjct: 65  DYDYLQHLK---------EPSGPSELIPSSTFSAHNRREEKEETLVIPSTGIKLPSSVFA 115

Query: 505 SEFEEDVGLLNKAAP-QGLRLDLDPEVVAA 591
           SEFEEDVGLLNKAAP  G RLD DP++VAA
Sbjct: 116 SEFEEDVGLLNKAAPVSGPRLDFDPDIVAA 145


>AY326463-1|AAR99513.1|   74|Homo sapiens putative protein STRF7
           protein.
          Length = 74

 Score = 36.7 bits (81), Expect = 0.11
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = -1

Query: 548 GAALLSKPTSSSNSEANTELGSI 480
           GAAL + PTSSSNSEANT+ G++
Sbjct: 13  GAALFNNPTSSSNSEANTDEGNL 35


>AF402000-1|AAM73764.1| 2542|Homo sapiens talin 2 protein.
          Length = 2542

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 247 TKDKDTEYTPEQRKEEQRKYGIYYDDDYNYLQHLKDTKE 363
           T  KD     ++RK E+ K  ++ DDD N+L H +  +E
Sbjct: 146 TLKKDRTLLRDERKMEKLKAKLHTDDDLNWLDHSRTFRE 184


>BC022348-1|AAH22348.1|  125|Homo sapiens KIAA1598 protein protein.
          Length = 125

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +1

Query: 196 ETAPQRVLVPVNTIIPPTKDKDTEYTPEQRKEEQ 297
           +  P  VL PV+T  P TKD+  E  P Q KE++
Sbjct: 69  QAEPVVVLDPVSTHEPQTKDQVAEKDPTQHKEDE 102


>AK001984-1|BAA92019.1|  125|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11122 fis, clone PLACE1006159. ).
          Length = 125

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +1

Query: 196 ETAPQRVLVPVNTIIPPTKDKDTEYTPEQRKEEQ 297
           +  P  VL PV+T  P TKD+  E  P Q KE++
Sbjct: 69  QAEPVVVLDPVSTHEPQTKDQVAEKDPTQHKEDE 102


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,951,428
Number of Sequences: 237096
Number of extensions: 1709145
Number of successful extensions: 4516
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4510
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)