Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_J12
(865 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-2779|AAF48893.2| 622|Drosophila melanogaster CG7274-PA... 224 1e-58
AE014297-922|AAF54368.1| 392|Drosophila melanogaster CG16755-PA... 31 2.0
D17389-4|BAA04212.1| 5112|Drosophila melanogaster ryanodine rece... 30 4.7
D17389-3|BAA41471.1| 5112|Drosophila melanogaster ryanodine rece... 30 4.7
D17389-2|BAA41470.1| 5126|Drosophila melanogaster ryanodine rece... 30 4.7
D17389-1|BAA41469.1| 5126|Drosophila melanogaster ryanodine rece... 30 4.7
AE013599-723|AAM71084.1| 5113|Drosophila melanogaster CG10844-PD... 30 4.7
AE013599-722|AAM71083.1| 5127|Drosophila melanogaster CG10844-PC... 30 4.7
AE013599-721|AAM71082.1| 5113|Drosophila melanogaster CG10844-PB... 30 4.7
AE013599-720|AAF59036.2| 5127|Drosophila melanogaster CG10844-PA... 30 4.7
>AE014298-2779|AAF48893.2| 622|Drosophila melanogaster CG7274-PA
protein.
Length = 622
Score = 224 bits (547), Expect = 1e-58
Identities = 115/200 (57%), Positives = 137/200 (68%), Gaps = 3/200 (1%)
Frame = +3
Query: 225 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIK---GTLR 395
DDPP LPVGT+VSAKYKGAFCEAK+ KVVRNIK KV K G G+ V+DD IK G LR
Sbjct: 2 DDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAYKQGLGSGIVSDDAIKAPTGQLR 61
Query: 396 IGSTVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETL 575
+G+ VEV+ +K+ +EA ITKIQDCSQYTVVFDDGDITTLRR+ALCLKSGRHFNESETL
Sbjct: 62 VGAVVEVRHPDRKELVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETL 121
Query: 576 XQLPLTHPEHFSTPVIAXXXXXXXXAQSDDSEGEGTSRPVKADSAXREPHVGRVVPVKAA 755
QLPLTHPEHF PV+ ++DS + K +E ++G+VV V+
Sbjct: 122 DQLPLTHPEHFGNPVVGGRRGRRRGHLNEDSSEDDDESDAKEVVNEKEENIGKVVCVETE 181
Query: 756 XGPEXXQPXXPAXXXXVVAP 815
+ + PA VVAP
Sbjct: 182 SKKKDKEKWFPA---LVVAP 198
>AE014297-922|AAF54368.1| 392|Drosophila melanogaster CG16755-PA
protein.
Length = 392
Score = 31.1 bits (67), Expect = 2.0
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -3
Query: 182 IVVVYVDKALKTVVNLSLRFIIM*FVH--YCYLQCVSYFLFN 63
+V++Y+ ++ V+ + II F H + Y+ C YFL++
Sbjct: 134 LVIIYIGSSIMVVIGPIITSIIAYFTHNVFTYMHCYPYFLYD 175
>D17389-4|BAA04212.1| 5112|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5112
Score = 29.9 bits (64), Expect = 4.7
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 288 HRMHPCILH*HQSPLA-SRVDHHPALRLIEPVDRLQY 181
HR+HPC+ H + P A R D+ A++ ++ + L Y
Sbjct: 903 HRIHPCLTHFEKLPAAEKRYDNQLAVQTLKTIISLGY 939
>D17389-3|BAA41471.1| 5112|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5112
Score = 29.9 bits (64), Expect = 4.7
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 288 HRMHPCILH*HQSPLA-SRVDHHPALRLIEPVDRLQY 181
HR+HPC+ H + P A R D+ A++ ++ + L Y
Sbjct: 903 HRIHPCLTHFEKLPAAEKRYDNQLAVQTLKTIISLGY 939
>D17389-2|BAA41470.1| 5126|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5126
Score = 29.9 bits (64), Expect = 4.7
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 288 HRMHPCILH*HQSPLA-SRVDHHPALRLIEPVDRLQY 181
HR+HPC+ H + P A R D+ A++ ++ + L Y
Sbjct: 903 HRIHPCLTHFEKLPAAEKRYDNQLAVQTLKTIISLGY 939
>D17389-1|BAA41469.1| 5126|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5126
Score = 29.9 bits (64), Expect = 4.7
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 288 HRMHPCILH*HQSPLA-SRVDHHPALRLIEPVDRLQY 181
HR+HPC+ H + P A R D+ A++ ++ + L Y
Sbjct: 903 HRIHPCLTHFEKLPAAEKRYDNQLAVQTLKTIISLGY 939
>AE013599-723|AAM71084.1| 5113|Drosophila melanogaster CG10844-PD,
isoform D protein.
Length = 5113
Score = 29.9 bits (64), Expect = 4.7
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 288 HRMHPCILH*HQSPLA-SRVDHHPALRLIEPVDRLQY 181
HR+HPC+ H + P A R D+ A++ ++ + L Y
Sbjct: 904 HRIHPCLTHFEKLPAAEKRYDNQLAVQTLKTIISLGY 940
>AE013599-722|AAM71083.1| 5127|Drosophila melanogaster CG10844-PC,
isoform C protein.
Length = 5127
Score = 29.9 bits (64), Expect = 4.7
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 288 HRMHPCILH*HQSPLA-SRVDHHPALRLIEPVDRLQY 181
HR+HPC+ H + P A R D+ A++ ++ + L Y
Sbjct: 904 HRIHPCLTHFEKLPAAEKRYDNQLAVQTLKTIISLGY 940
>AE013599-721|AAM71082.1| 5113|Drosophila melanogaster CG10844-PB,
isoform B protein.
Length = 5113
Score = 29.9 bits (64), Expect = 4.7
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 288 HRMHPCILH*HQSPLA-SRVDHHPALRLIEPVDRLQY 181
HR+HPC+ H + P A R D+ A++ ++ + L Y
Sbjct: 904 HRIHPCLTHFEKLPAAEKRYDNQLAVQTLKTIISLGY 940
>AE013599-720|AAF59036.2| 5127|Drosophila melanogaster CG10844-PA,
isoform A protein.
Length = 5127
Score = 29.9 bits (64), Expect = 4.7
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 288 HRMHPCILH*HQSPLA-SRVDHHPALRLIEPVDRLQY 181
HR+HPC+ H + P A R D+ A++ ++ + L Y
Sbjct: 904 HRIHPCLTHFEKLPAAEKRYDNQLAVQTLKTIISLGY 940
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,016,003
Number of Sequences: 53049
Number of extensions: 704563
Number of successful extensions: 1673
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1672
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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