Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_J04
(839 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070660-1|AAL48131.1| 200|Drosophila melanogaster RH04437p pro... 45 1e-04
AE014297-2840|AAF55794.1| 381|Drosophila melanogaster CG5494-PA... 45 1e-04
U21717-1|AAA92045.1| 743|Drosophila melanogaster nervy protein. 30 4.5
BT004898-1|AAO47876.1| 743|Drosophila melanogaster LD17501p pro... 30 4.5
AY070569-1|AAL48040.1| 241|Drosophila melanogaster RE11283p pro... 30 4.5
AE014297-4671|AAF57092.1| 241|Drosophila melanogaster CG12045-P... 30 4.5
AE013599-3848|AAF47191.2| 743|Drosophila melanogaster CG3385-PA... 30 4.5
AE014297-4726|AAF57134.2| 511|Drosophila melanogaster CG15564-P... 27 5.5
L35153-1|AAA64457.1| 857|Drosophila melanogaster polycomblike n... 29 7.9
AY075585-1|AAL68389.1| 1043|Drosophila melanogaster SD09488p pro... 29 7.9
AE013599-2620|AAF57748.2| 1043|Drosophila melanogaster CG5109-PA... 29 7.9
>AY070660-1|AAL48131.1| 200|Drosophila melanogaster RH04437p
protein.
Length = 200
Score = 45.2 bits (102), Expect = 1e-04
Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Frame = +2
Query: 254 LDTPEVAQARAAHISALQQASKNNPNPN---DDGSYDPRWD 367
+DTPEV A+AAH +AL QAS + + DDGSYD RW+
Sbjct: 81 VDTPEVQHAKAAHYAALSQASAHGGASHGSWDDGSYDGRWE 121
Score = 30.3 bits (65), Expect = 3.4
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 188 AHASGWAGP-PANIALSQDGRNILDTPEVAQARAAHISALQQASKNNPNPNDDGSY 352
++ASG+A P +I + +G + + EV ARAAH++AL A+ + P GSY
Sbjct: 129 SYASGYAHKGPIHIPVIHNGVPV-EPAEVQHARAAHLNAL--AAAGHGAPASHGSY 181
>AE014297-2840|AAF55794.1| 381|Drosophila melanogaster CG5494-PA
protein.
Length = 381
Score = 45.2 bits (102), Expect = 1e-04
Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Frame = +2
Query: 254 LDTPEVAQARAAHISALQQASKNNPNPN---DDGSYDPRWD 367
+DTPEV A+AAH +AL QAS + + DDGSYD RW+
Sbjct: 262 VDTPEVQHAKAAHYAALSQASAHGGASHGSWDDGSYDGRWE 302
Score = 33.1 bits (72), Expect = 0.49
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +2
Query: 161 VACLALACGAHASGWAGPPANIALSQDGRNILDTPEVAQARAAHISALQQASKN 322
V A A GA+A +A P +I + G +DTPEV A+AAH +A A+ N
Sbjct: 102 VYAAAHAHGAYAP-YAHGPIHIPVLTHGGVPVDTPEVQHAKAAHAAAHAAAAHN 154
Score = 30.3 bits (65), Expect = 3.4
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 188 AHASGWAGP-PANIALSQDGRNILDTPEVAQARAAHISALQQASKNNPNPNDDGSY 352
++ASG+A P +I + +G + + EV ARAAH++AL A+ + P GSY
Sbjct: 310 SYASGYAHKGPIHIPVIHNGVPV-EPAEVQHARAAHLNAL--AAAGHGAPASHGSY 362
Score = 29.9 bits (64), Expect = 4.5
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 191 HASGWA-GPPANIALSQDGRNILDTPEVAQARAAHISALQQA 313
+ GWA G A++ L+ G + DTP+V A+A H +A +A
Sbjct: 166 YGGGWAYGQAAHVPLTHGGVPV-DTPDVQAAKAEHYAAHAKA 206
>U21717-1|AAA92045.1| 743|Drosophila melanogaster nervy protein.
Length = 743
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 212 PPANIALSQDGRNILDTPEVAQARAAHISALQQASKNNPNPNDDGSYDPRWDNEEYWQ 385
P A + +D R++ +++A+A H + Q+A PNPN P EE W+
Sbjct: 404 PSAAAFMQRDERDL----RMSEAQARHAAPPQRAGNPQPNPNAAAPGAPGAGGEEEWK 457
>BT004898-1|AAO47876.1| 743|Drosophila melanogaster LD17501p
protein.
Length = 743
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 212 PPANIALSQDGRNILDTPEVAQARAAHISALQQASKNNPNPNDDGSYDPRWDNEEYWQ 385
P A + +D R++ +++A+A H + Q+A PNPN P EE W+
Sbjct: 404 PSAAAFMQRDERDL----RMSEAQARHAAPPQRAGNPQPNPNAAAPGAPGAGGEEEWK 457
>AY070569-1|AAL48040.1| 241|Drosophila melanogaster RE11283p
protein.
Length = 241
Score = 29.9 bits (64), Expect = 4.5
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 308 QASKNNPNPNDDGSYDPRWDNEEYWQQAE 394
QAS + + DDGSYDPR+++ + Q +
Sbjct: 130 QASFRSNDYGDDGSYDPRYNDPSFGQNQQ 158
>AE014297-4671|AAF57092.1| 241|Drosophila melanogaster CG12045-PA
protein.
Length = 241
Score = 29.9 bits (64), Expect = 4.5
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 308 QASKNNPNPNDDGSYDPRWDNEEYWQQAE 394
QAS + + DDGSYDPR+++ + Q +
Sbjct: 130 QASFRSNDYGDDGSYDPRYNDPSFGQNQQ 158
>AE013599-3848|AAF47191.2| 743|Drosophila melanogaster CG3385-PA
protein.
Length = 743
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 212 PPANIALSQDGRNILDTPEVAQARAAHISALQQASKNNPNPNDDGSYDPRWDNEEYWQ 385
P A + +D R++ +++A+A H + Q+A PNPN P EE W+
Sbjct: 404 PSAAAFMQRDERDL----RMSEAQARHAAPPQRAGNPQPNPNAAAPGAPGAGGEEEWK 457
>AE014297-4726|AAF57134.2| 511|Drosophila melanogaster CG15564-PA
protein.
Length = 511
Score = 27.1 bits (57), Expect(2) = 5.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 613 PTTMERPSSPGLECPRPPG 669
P+ + P PG +CP PPG
Sbjct: 332 PSPLSLPIPPGKKCPGPPG 350
Score = 21.0 bits (42), Expect(2) = 5.5
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +1
Query: 436 PRPLMERCPCCCSFMERCP 492
P+ E C C C M++ P
Sbjct: 311 PQRCCELCTCKCPAMQKSP 329
>L35153-1|AAA64457.1| 857|Drosophila melanogaster polycomblike
nuclear protein protein.
Length = 857
Score = 29.1 bits (62), Expect = 7.9
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +1
Query: 613 PTTMERPSSPGLECPRPPGL-ERSRSQDWNA--PAHQSWNGAPSXQSGAPLTXPXXXDXP 783
PTT E SSPG P PP L +S + N+ P+ ++ AP P P P
Sbjct: 282 PTTPEAMSSPGKSSPSPPLLATQSLLKGVNSMKPSFKTVEAAPPTPPTPPSPPPPPPAPP 341
Query: 784 TMXPA 798
P+
Sbjct: 342 VAAPS 346
>AY075585-1|AAL68389.1| 1043|Drosophila melanogaster SD09488p
protein.
Length = 1043
Score = 29.1 bits (62), Expect = 7.9
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +1
Query: 613 PTTMERPSSPGLECPRPPGL-ERSRSQDWNA--PAHQSWNGAPSXQSGAPLTXPXXXDXP 783
PTT E SSPG P PP L +S + N+ P+ ++ AP P P P
Sbjct: 282 PTTPEAMSSPGKSSPSPPLLATQSLLKGVNSMKPSFKTVEAAPPTPPTPPSPPPPPPAPP 341
Query: 784 TMXPA 798
P+
Sbjct: 342 VAAPS 346
>AE013599-2620|AAF57748.2| 1043|Drosophila melanogaster CG5109-PA
protein.
Length = 1043
Score = 29.1 bits (62), Expect = 7.9
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +1
Query: 613 PTTMERPSSPGLECPRPPGL-ERSRSQDWNA--PAHQSWNGAPSXQSGAPLTXPXXXDXP 783
PTT E SSPG P PP L +S + N+ P+ ++ AP P P P
Sbjct: 282 PTTPEAMSSPGKSSPSPPLLATQSLLKGVNSMKPSFKTVEAAPPTPPTPPSPPPPPPAPP 341
Query: 784 TMXPA 798
P+
Sbjct: 342 VAAPS 346
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,967,232
Number of Sequences: 53049
Number of extensions: 551819
Number of successful extensions: 2153
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2151
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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