Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_I23
         (856 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0899 - 8689125-8689383,8689540-8689826                           31   0.89 
02_04_0275 - 21469391-21470650                                         31   0.89 
03_05_0411 - 23972738-23973606,23977701-23977794,23978487-239785...    30   2.0  
12_02_0305 - 17235832-17236379,17237345-17237444                       29   4.7  
04_04_0946 - 29579779-29580004,29580098-29580210                       29   4.7  
08_02_0246 + 14745367-14745372,14745452-14746106,14746299-147472...    29   6.2  
03_02_0293 - 7166470-7167618                                           29   6.2  
03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729...    28   8.3  

>12_01_0899 - 8689125-8689383,8689540-8689826
          Length = 181

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +2

Query: 146 PRCQRWWCPQWPWHLANYMSQPPTKLPRSPPSSKRGSLEPRPRL 277
           P C R   P+ PW +A    +PP      PP+   G+   RP L
Sbjct: 38  PPCARLLLPEPPWGMAALPPEPPWGAAAHPPAPHWGAGPSRPAL 81


>02_04_0275 - 21469391-21470650
          Length = 419

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -1

Query: 382 GLRRTPPSPQPGCSSSHKHERYHHQCSRHDQSLLDQP 272
           G RRT  +   G SS+H H RY  Q SRH  +   QP
Sbjct: 345 GTRRTAMATDVGTSSNH-HVRYRFQDSRHCHAAPQQP 380


>03_05_0411 -
           23972738-23973606,23977701-23977794,23978487-23978549,
           23979558-23979630,23980325-23980375,23980491-23980906,
           23981066-23981396,23983165-23983223,23983799-23983975
          Length = 710

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 519 WACSGCFGYPIDGKGPIDTKSRMRVGIKAPGII 617
           W C G +G P  G+G  D K    +G+   G I
Sbjct: 636 WKCLGNWGLPFHGRGYFDPKLNAMIGLSMDGRI 668


>12_02_0305 - 17235832-17236379,17237345-17237444
          Length = 215

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +2

Query: 203 SQPPTKLPRSPPSSKRGSLEPRPRLI 280
           SQPPT  P  PP+   GS  PR  +I
Sbjct: 114 SQPPTIAPTQPPTPSGGSQCPRENVI 139


>04_04_0946 - 29579779-29580004,29580098-29580210
          Length = 112

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 334 HKHERYHHQCSRHDQSLLDQPWTRLQGSSLR 242
           H H R+HHQ  +   ++   PW   +G +LR
Sbjct: 81  HHHHRHHHQQPQPRPAIDANPWGTARGPALR 111


>08_02_0246 + 14745367-14745372,14745452-14746106,14746299-14747269,
            14748123-14749168,14750669-14751473
          Length = 1160

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
 Frame = +1

Query: 370  FSSGLKGMALNLEPDNVGVVVFG--NDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALG 543
            F+SG+ G   +L P NV   + G  N   I  GD     G  V +   +++L  ++  LG
Sbjct: 792  FASGIAGAPAHLSPGNVPAHMKGELNTAFIGLGDDGGYGGGWVPLAALKKVLRGILKYLG 851

Query: 544  TL-LMARDQSTRNPV*GSVLR 603
             L L A+       + GSVL+
Sbjct: 852  VLWLFAQLPDLLKEILGSVLK 872


>03_02_0293 - 7166470-7167618
          Length = 382

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +3

Query: 519 WACSGCFGYPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMXTGIKAVDS 671
           W   G +  P  G+G  D K R  VG+ +PG +    V     + + A  S
Sbjct: 231 WTRRGDWLLPFHGQGHYDAKLRAWVGLHSPGHVCTCDVPSTTFSSVAAATS 281


>03_02_0308 -
           7297228-7298008,7298495-7298576,7298612-7298669,
           7298723-7298835,7298924-7299034,7299480-7299597,
           7299706-7299809,7300570-7300665,7301806-7302307
          Length = 654

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
 Frame = -1

Query: 427 PHPHCQVPS*GPFP*GLRRTPPSPQPGCSSSHKHERY--HHQCS 302
           PH   Q P   P P      PP  +P  S+SH H R+  HH  S
Sbjct: 110 PHHQQQGPGASPSP---PPPPPRGRPSFSASHSHHRHGGHHHRS 150


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,657,126
Number of Sequences: 37544
Number of extensions: 497345
Number of successful extensions: 1691
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1684
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)