Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_I23
(856 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 181 7e-46
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 181 7e-46
AL023815-2|CAD92383.1| 146|Caenorhabditis elegans Hypothetical ... 126 2e-29
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 119 3e-27
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 35 0.064
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 31 0.79
Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical p... 31 1.4
U64858-4|AAB18282.2| 151|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z83125-7|CAB05619.1| 407|Caenorhabditis elegans Hypothetical pr... 30 2.4
AC006637-1|AAK85476.2| 342|Caenorhabditis elegans Hypothetical ... 29 3.2
Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical pr... 28 7.4
U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linke... 28 7.4
U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linke... 28 7.4
U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linke... 28 7.4
AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-lin... 28 7.4
AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-lin... 28 7.4
AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-lin... 28 7.4
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 181 bits (440), Expect = 7e-46
Identities = 87/107 (81%), Positives = 99/107 (92%)
Frame = +1
Query: 223 AEISTILEERILGAASKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 402
+E+S ILEERILG + +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 7 SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 66
Query: 403 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALG 543
L+ DNVGVVVFGNDK+I+EGDIVKRTGAIVDVPVG+ +LGRVVDALG
Sbjct: 67 LDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALG 113
Score = 71.7 bits (168), Expect = 6e-13
Identities = 33/44 (75%), Positives = 36/44 (81%)
Frame = +3
Query: 540 GYPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMXTGIKAVDS 671
G PIDGKGPI R RV +KAPGIIPR+SVREPM TG+KAVDS
Sbjct: 113 GNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDS 156
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 181 bits (440), Expect = 7e-46
Identities = 87/107 (81%), Positives = 99/107 (92%)
Frame = +1
Query: 223 AEISTILEERILGAASKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 402
+E+S ILEERILG + +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 34 SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 93
Query: 403 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALG 543
L+ DNVGVVVFGNDK+I+EGDIVKRTGAIVDVPVG+ +LGRVVDALG
Sbjct: 94 LDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALG 140
Score = 71.7 bits (168), Expect = 6e-13
Identities = 33/44 (75%), Positives = 36/44 (81%)
Frame = +3
Query: 540 GYPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMXTGIKAVDS 671
G PIDGKGPI R RV +KAPGIIPR+SVREPM TG+KAVDS
Sbjct: 140 GNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDS 183
>AL023815-2|CAD92383.1| 146|Caenorhabditis elegans Hypothetical
protein H28O16.1b protein.
Length = 146
Score = 126 bits (305), Expect = 2e-29
Identities = 60/76 (78%), Positives = 69/76 (90%)
Frame = +1
Query: 223 AEISTILEERILGAASKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 402
+E+S ILEERILG + +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 34 SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 93
Query: 403 LEPDNVGVVVFGNDKL 450
L+ DNVGVVVFGNDK+
Sbjct: 94 LDVDNVGVVVFGNDKI 109
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 119 bits (286), Expect = 3e-27
Identities = 57/73 (78%), Positives = 65/73 (89%)
Frame = +1
Query: 223 AEISTILEERILGAASKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 402
+E+S ILEERILG + +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 34 SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 93
Query: 403 LEPDNVGVVVFGN 441
L+ DNVGVVV GN
Sbjct: 94 LDVDNVGVVVLGN 106
Score = 71.7 bits (168), Expect = 6e-13
Identities = 33/44 (75%), Positives = 36/44 (81%)
Frame = +3
Query: 540 GYPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMXTGIKAVDS 671
G PIDGKGPI R RV +KAPGIIPR+SVREPM TG+KAVDS
Sbjct: 105 GNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDS 148
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 35.1 bits (77), Expect = 0.064
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 540 GYPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMXTGIKAVD 668
G PID +GPI +K+ + +AP + +E + TGIK VD
Sbjct: 158 GEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVD 200
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +1
Query: 424 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALG 543
+ + G + L++ G V TG + +PVG + LGR+++ +G
Sbjct: 120 IAMDGTEGLVR-GQPVADTGDPIKIPVGPETLGRIMNVIG 158
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 31.5 bits (68), Expect = 0.79
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 382 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDAL 540
L G + LE D + V+ + GD V RTG + V +G I+G + D +
Sbjct: 39 LVGEIIRLEGDYATIQVYEETSGVTIGDPVLRTGKPLSVELGPGIMGSIFDGI 91
>Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical
protein C38D9.5 protein.
Length = 1213
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +1
Query: 328 VYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDK-LIKEGDIVKRTGAIVDVPV 504
+ GL +Q+ + E G+K + +L + +DK LIK G I+ + I VP+
Sbjct: 631 IAGLPEMQSSWIQENRDGMKKLLDDLTKLDKYAKDHSSDKDLIKYGSILSKASEITGVPI 690
Query: 505 GEQILGR-VVDAL 540
++G+ VV AL
Sbjct: 691 DTSLIGKSVVPAL 703
>Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical
protein C38D9.5 protein.
Length = 1213
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +1
Query: 328 VYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDK-LIKEGDIVKRTGAIVDVPV 504
+ GL +Q+ + E G+K + +L + +DK LIK G I+ + I VP+
Sbjct: 631 IAGLPEMQSSWIQENRDGMKKLLDDLTKLDKYAKDHSSDKDLIKYGSILSKASEITGVPI 690
Query: 505 GEQILGR-VVDAL 540
++G+ VV AL
Sbjct: 691 DTSLIGKSVVPAL 703
>U64858-4|AAB18282.2| 151|Caenorhabditis elegans Hypothetical
protein C16D9.3 protein.
Length = 151
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 367 PPSPQPGCSSSHKHERYHHQCSRHDQSLLD 278
PP Q C ER H C R+DQS+++
Sbjct: 96 PPGSQLKCHFDKSRERLHANCYRYDQSVVN 125
>Z83125-7|CAB05619.1| 407|Caenorhabditis elegans Hypothetical
protein T15D6.9 protein.
Length = 407
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 367 PPSPQPGCSSSHKHERYHHQCSRHDQSLLD 278
PP Q C H +Y+ C R+DQS+++
Sbjct: 285 PPGSQSICIFLHDWNKYYADCFRYDQSIIN 314
>AC006637-1|AAK85476.2| 342|Caenorhabditis elegans Hypothetical
protein F41B4.1 protein.
Length = 342
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 376 RRTPPSPQPGCSSSHKHERYHHQCSRHDQSLLDQ 275
R PP P P + SHK+E SR S L++
Sbjct: 54 RELPPPPPPRKTPSHKYEEMRRSLSRGPSSTLER 87
>Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical
protein C15C8.3 protein.
Length = 428
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 411 RFQVKGHSLEA*GELHHLLSLDVLQAINTSDTITNAQDTTSLF*ISLGRGSKD-PLFEDG 235
R KG E E + LLS LQ ++S + + +D + ISLG +++ LF D
Sbjct: 32 RMNAKGKLAEYEKERNELLSKKSLQLASSSSPVIDYEDMAYMVQISLGSPAQNFVLFIDS 91
Query: 234 GDLGSFV 214
G +V
Sbjct: 92 GSSNLWV 98
>U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform b protein.
Length = 713
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 296 RPVSSRSALDAAPR-ILSSRMVEISAALWVVETCSLRDXXXXXXXXTFDTWVAALGKRLA 120
RP SSR + + PR I + E +AA + E+ D D WV ++ KR+A
Sbjct: 453 RPRSSRRSEHSTPRQIAKVKQAEGTAAQLIEESVPDDDQTETIEVKRTDRWVVSMKKRIA 512
>U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform a protein.
Length = 682
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 296 RPVSSRSALDAAPR-ILSSRMVEISAALWVVETCSLRDXXXXXXXXTFDTWVAALGKRLA 120
RP SSR + + PR I + E +AA + E+ D D WV ++ KR+A
Sbjct: 422 RPRSSRRSEHSTPRQIAKVKQAEGTAAQLIEESVPDDDQTETIEVKRTDRWVVSMKKRIA 481
>U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform c protein.
Length = 622
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 296 RPVSSRSALDAAPR-ILSSRMVEISAALWVVETCSLRDXXXXXXXXTFDTWVAALGKRLA 120
RP SSR + + PR I + E +AA + E+ D D WV ++ KR+A
Sbjct: 422 RPRSSRRSEHSTPRQIAKVKQAEGTAAQLIEESVPDDDQTETIEVKRTDRWVVSMKKRIA 481
>AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1c protein.
Length = 622
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 296 RPVSSRSALDAAPR-ILSSRMVEISAALWVVETCSLRDXXXXXXXXTFDTWVAALGKRLA 120
RP SSR + + PR I + E +AA + E+ D D WV ++ KR+A
Sbjct: 422 RPRSSRRSEHSTPRQIAKVKQAEGTAAQLIEESVPDDDQTETIEVKRTDRWVVSMKKRIA 481
>AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1a protein.
Length = 713
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 296 RPVSSRSALDAAPR-ILSSRMVEISAALWVVETCSLRDXXXXXXXXTFDTWVAALGKRLA 120
RP SSR + + PR I + E +AA + E+ D D WV ++ KR+A
Sbjct: 453 RPRSSRRSEHSTPRQIAKVKQAEGTAAQLIEESVPDDDQTETIEVKRTDRWVVSMKKRIA 512
>AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1b protein.
Length = 682
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 296 RPVSSRSALDAAPR-ILSSRMVEISAALWVVETCSLRDXXXXXXXXTFDTWVAALGKRLA 120
RP SSR + + PR I + E +AA + E+ D D WV ++ KR+A
Sbjct: 422 RPRSSRRSEHSTPRQIAKVKQAEGTAAQLIEESVPDDDQTETIEVKRTDRWVVSMKKRIA 481
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,137,480
Number of Sequences: 27780
Number of extensions: 368137
Number of successful extensions: 1181
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1179
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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