Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_I22
         (900 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ...    29   4.5  
U97403-2|AAB52472.2|  649|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
           protein H02F09.3 protein.
          Length = 1275

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 21/60 (35%), Positives = 28/60 (46%)
 Frame = -3

Query: 517 GSCSRIPSTXEGSGCGFGTGSVMGLVQQISTLSWQSSSPNLTSSTPHPVTLALLTSTPSL 338
           GS +  PST  GS     TGS    V + ST+S  + S  +  ST   V+ A   S  S+
Sbjct: 622 GSSTSGPSTISGSSASTVTGST---VTEASTISGSTESSTIPGSTESTVSEASTVSGSSV 678


>U97403-2|AAB52472.2|  649|Caenorhabditis elegans Hypothetical
           protein T10E9.4 protein.
          Length = 649

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
 Frame = +3

Query: 234 NLEDIIVKPTESNSVFTDKNGESCKCVPYYLCNKNNE-GVDVNNASVTGWGVLDVRFGEE 410
           N  D +  PT  N  F D++G     + +  C K  +   D+ +  V   G+    + E 
Sbjct: 188 NFCDSVYNPTFKNHRFLDRSGPKESSLQF--CYKQPDLKPDLKHVKVD-LGLKLCHYNE- 243

Query: 411 DCQESVEICCTNPITEPVPKPQPDPSXVEGM 503
           DC    EIC  + IT      QP+   V G+
Sbjct: 244 DCGNETEICHIDNITVYANVTQPEKIAVPGI 274


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,989,725
Number of Sequences: 27780
Number of extensions: 354497
Number of successful extensions: 1449
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)