Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_I21
         (863 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1136 + 24218601-24218734,24218769-24219906                       30   2.1  
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585     30   2.1  
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18...    30   2.7  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   3.6  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   3.6  
07_01_0862 - 7172083-7172931                                           28   8.4  

>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 34/119 (28%), Positives = 35/119 (29%)
 Frame = -3

Query: 852 GGGXGXXXXXXXXGRXXXGGGXXXXFFFXXXGXXGGGAPXXXXXXGRXXFFFXXXRGGGR 673
           GGG G        G    GG           G  GGGAP      G          GGGR
Sbjct: 110 GGGGGGGPPSLPPGAGGGGGARPPA----PGGGGGGGAPRRVLGGGGGGGALARPPGGGR 165

Query: 672 XXXPQKNKPPXXXXXXXGFFXXXGGGNXXXGGGXSPPXFFFXXXGGXGXXGXXXXXGHP 496
                  +PP       G     GGG    GGG  P        GG G  G     G P
Sbjct: 166 GG--ALGRPPGGGGGGGGPGRAPGGG----GGGGGPGRAPGGGGGGGGLGGGGGEGGAP 218


>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
          Length = 268

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/40 (35%), Positives = 16/40 (40%)
 Frame = +1

Query: 289 EVPKXXNCXLKKXPXXXPPXXKXHPPXPXXKKKXPXPPXK 408
           E PK  +C   K     PP     PP P  +K  P P  K
Sbjct: 124 EKPKPCHCEKPKPCEKPPPCKPEEPPKPPPEKPPPKPECK 163


>05_01_0028 +
           182528-183852,183967-184127,184872-185116,185330-186073
          Length = 824

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/37 (35%), Positives = 13/37 (35%)
 Frame = +2

Query: 743 PPPXXPXXXKKKXKXXPPPXXXRPXXXXXXXXPXPPP 853
           PPP  P          PPP   RP        P PPP
Sbjct: 58  PPPPLPTPTVTTPTPPPPPPAPRPPRRHHRIPPPPPP 94


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/59 (27%), Positives = 16/59 (27%)
 Frame = +3

Query: 678 PPPXXXKKKXXFFPXXXXXXGPXPPXXXXXXKKKXXXPPPXPGGXPXXXXXXXXXXPRP 854
           PPP     K  F P       P PP            PPP P   P          P P
Sbjct: 550 PPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPP 608



 Score = 29.5 bits (63), Expect = 3.6
 Identities = 12/37 (32%), Positives = 13/37 (35%)
 Frame = +2

Query: 743 PPPXXPXXXKKKXKXXPPPXXXRPXXXXXXXXPXPPP 853
           PPP  P    +     PPP    P        P PPP
Sbjct: 605 PPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPP 641


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/38 (34%), Positives = 13/38 (34%)
 Frame = +2

Query: 740 APPPXXPXXXKKKXKXXPPPXXXRPXXXXXXXXPXPPP 853
           APPP  P          PPP    P        P PPP
Sbjct: 312 APPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPP 349



 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/44 (36%), Positives = 16/44 (36%)
 Frame = +3

Query: 678 PPPXXXKKKXXFFPXXXXXXGPXPPXXXXXXKKKXXXPPPXPGG 809
           PPP    K     P      GP PP       KK   PPP P G
Sbjct: 344 PPPPPPAKGP---PPPPPPKGPSPPPPPPPGGKKGGPPPPPPKG 384


>07_01_0862 - 7172083-7172931
          Length = 282

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/47 (31%), Positives = 16/47 (34%)
 Frame = +3

Query: 675 FPPPXXXKKKXXFFPXXXXXXGPXPPXXXXXXKKKXXXPPPXPGGXP 815
           FPPP   +KK   FP                  KK   PPP P   P
Sbjct: 146 FPPPLPPRKKAMLFPLPLPPRKKPLLYPPPLPPKKKPLPPPSPPPQP 192


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,176,379
Number of Sequences: 37544
Number of extensions: 429465
Number of successful extensions: 1368
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)