Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_I14
         (812 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1138 + 24631919-24632248,24634100-24634502,24634788-246349...    30   2.5  
07_01_0714 - 5451246-5451408,5453401-5453534,5453608-5453796,545...    28   7.7  
06_03_1450 + 30246702-30247346,30248603-30248689,30248789-302489...    28   7.7  

>08_02_1138 +
           24631919-24632248,24634100-24634502,24634788-24634982,
           24635384-24635838,24636119-24636349,24636891-24637123,
           24637899-24637971
          Length = 639

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = +1

Query: 220 VIRAASLRDNKNKELQVLVEYDGVEWQRRE----WVAVYSRRTFR 342
           V R A  R++  +++  L+ YD + W  RE    W A+Y R  F+
Sbjct: 588 VKRRAGRRNDGRRKVLGLLHYDSIGWCLREELERWKAIYQRENFQ 632


>07_01_0714 -
           5451246-5451408,5453401-5453534,5453608-5453796,
           5454313-5454825,5455815-5456856,5457283-5457380,
           5458224-5458451
          Length = 788

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -2

Query: 463 ASASIVRSAASCVNVNAGHCT 401
           A+A  +R+AA CV ++ GHC+
Sbjct: 353 AAAGGLRAAAECVQISLGHCS 373


>06_03_1450 +
           30246702-30247346,30248603-30248689,30248789-30248920,
           30249016-30249162,30250375-30250440,30250519-30250629,
           30251551-30251584,30251667-30251743,30251829-30251906
          Length = 458

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +3

Query: 384 TVEGKEVQWPALTFTQLAADLTIEADAQPVEYLHDKQLQFMDYANLL-PYQKWDAHLAGS 560
           TV    VQ+  +  + ++    I   A+P E  +D++  F+D+ NL+ P  +   H    
Sbjct: 281 TVTAASVQFKEMGGSSISRSRAIADAAKPPEQQNDRRKNFLDWRNLMKPMNEEKDHWVPD 340

Query: 561 ESGVESVTLSA 593
           E+  +    +A
Sbjct: 341 EAVTKCTACTA 351


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,624,284
Number of Sequences: 37544
Number of extensions: 387245
Number of successful extensions: 866
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)