Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_I12
         (858 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe...   246   2e-65
AF003132-2|AAB54134.2|  568|Caenorhabditis elegans Hypothetical ...    31   0.79 
Z46787-15|CAO78702.1|  829|Caenorhabditis elegans Hypothetical p...    29   4.2  
Z35596-1|CAO78712.1|  829|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AC024777-3|AAF60562.3|  563|Caenorhabditis elegans Hypothetical ...    29   4.2  
Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical p...    29   5.6  
AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical ...    29   5.6  
Z81069-5|CAB02995.1|  504|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U55373-9|AAV58870.1|  648|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U55373-8|AAD34666.1|  805|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U55373-7|AAC25890.2|  890|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z82286-4|CAB05310.1|  468|Caenorhabditis elegans Hypothetical pr...    28   9.8  
AF016444-8|AAB65934.1|  219|Caenorhabditis elegans Hypothetical ...    28   9.8  

>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying
           defective protein 45 protein.
          Length = 1076

 Score =  246 bits (601), Expect = 2e-65
 Identities = 126/256 (49%), Positives = 163/256 (63%), Gaps = 9/256 (3%)
 Frame = +3

Query: 12  AQDRSDRTILTPWVKFLWESYCQCLELLRTNAHVETLYHDIARMAFQFCLKYSRKTEFRK 191
           AQDR DRT+L PW++FLW+SY  CLELLR NA VE LYH I+R +F FCL+Y R+TEFRK
Sbjct: 138 AQDRMDRTVLAPWLRFLWDSYRNCLELLRNNAQVEQLYHTISRHSFTFCLRYQRRTEFRK 197

Query: 192 LCDKLRKHLEDICK----PTVQTGNVSISKPETQQLNLETRLFQLDCAIQMELWQEAYKA 359
           LCD LR HL  I K    P V +  V ++ PE+  L  +TRL QLD AIQMELWQEAYK+
Sbjct: 198 LCDLLRMHLNQIQKHQYAPNVNSFRVKLTSPESLGLMQDTRLIQLDTAIQMELWQEAYKS 257

Query: 360 IEDIHNLMNMS----KKTPVAKTMANYYGKLALVFWKAGHCLFHAAALLKLFQLYREMKK 527
            ED+H +M +S    K+T    +  NYY KLALVFWKAG+ LFHAAALL+ F +Y++MKK
Sbjct: 258 AEDVHGMMQLSKDKDKRTVKPASYVNYYDKLALVFWKAGNSLFHAAALLQKFIIYKDMKK 317

Query: 528 NITQEELQKMACQXXXXXXXXXXXXXHP-ELDRFVXTDXSPVEKAQRLAVLLGLAQPPTR 704
           + TQ+E Q+ A +              P +L R +  +   V   + L+ LL L   PT+
Sbjct: 318 SFTQDEAQEQATRVLLATLSIPEGSDSPSDLSRNLDIEDQHVANMRLLSNLLRLPIAPTK 377

Query: 705 XSLXKDIVRLNVXSXA 752
             + K+  R+ V   A
Sbjct: 378 NGILKEAARIGVPEAA 393


>AF003132-2|AAB54134.2|  568|Caenorhabditis elegans Hypothetical
           protein F37E3.2 protein.
          Length = 568

 Score = 31.5 bits (68), Expect = 0.79
 Identities = 13/50 (26%), Positives = 29/50 (58%)
 Frame = +3

Query: 381 MNMSKKTPVAKTMANYYGKLALVFWKAGHCLFHAAALLKLFQLYREMKKN 530
           M+++ +T   K+  N Y ++ ++    G+C      +L+  ++YRE++KN
Sbjct: 440 MHLANRTNNLKSFVNQYSEMRMLKSGLGYCKEQYDWMLEQMEVYRELEKN 489


>Z46787-15|CAO78702.1|  829|Caenorhabditis elegans Hypothetical
           protein C30D11.1a protein.
          Length = 829

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/32 (46%), Positives = 15/32 (46%)
 Frame = +2

Query: 485 SLAETLPAIQGDEEEHHPRGTAEDGVSSTGSG 580
           SL  T PA       HH R T   GVS TG G
Sbjct: 22  SLTFTPPATLVPPTHHHSRSTNRGGVSGTGGG 53


>Z35596-1|CAO78712.1|  829|Caenorhabditis elegans Hypothetical
           protein C30D11.1a protein.
          Length = 829

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/32 (46%), Positives = 15/32 (46%)
 Frame = +2

Query: 485 SLAETLPAIQGDEEEHHPRGTAEDGVSSTGSG 580
           SL  T PA       HH R T   GVS TG G
Sbjct: 22  SLTFTPPATLVPPTHHHSRSTNRGGVSGTGGG 53


>AC024777-3|AAF60562.3|  563|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.3 protein.
          Length = 563

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
 Frame = +3

Query: 165 YSRK--TEFRKLCDKLRKHLEDICKPTVQTGNVSISKPETQQLNLETRLFQLDCAIQMEL 338
           YS K   E R  C +++K ++ + K   +  N   +  + QQL    RL+ +  A+Q  +
Sbjct: 366 YSHKHGEELRSKCLEIQKSIDYVSKKIAEGANDKPNSAKEQQLRKNIRLYAVQ-ALQGLI 424

Query: 339 WQ-EAYKAIEDIHNLMNMSKKTPVAKTMA 422
            Q E+    E+  NL+ + +K   AK  A
Sbjct: 425 GQMESLPTAEECSNLI-IKRKERRAKDFA 452


>Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical
           protein M01G12.12 protein.
          Length = 1579

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 198 DKLRKHLEDICKPTVQTGNVSISKPETQQ 284
           +K R H E  C P ++ G+V   KP TQ+
Sbjct: 201 NKTRIHFELNCPPLIRQGSVDDDKPSTQK 229


>AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical
           protein M01G12.12 protein.
          Length = 1579

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 198 DKLRKHLEDICKPTVQTGNVSISKPETQQ 284
           +K R H E  C P ++ G+V   KP TQ+
Sbjct: 201 NKTRIHFELNCPPLIRQGSVDDDKPSTQK 229


>Z81069-5|CAB02995.1|  504|Caenorhabditis elegans Hypothetical
           protein F25H9.5 protein.
          Length = 504

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +3

Query: 90  LLRTNAHVETLYHDIARMAFQFCLKYSRKTEFRKLCDKLRKHLEDI 227
           LL    H+ +L + I   AF FCL++    E R     +R H+++I
Sbjct: 209 LLLGRLHLLSLENTIRVAAFLFCLQFGNFDETRHDVAFIRNHIDEI 254


>U55373-9|AAV58870.1|  648|Caenorhabditis elegans Hypothetical
           protein F26F12.3c protein.
          Length = 648

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +3

Query: 78  QCLELLRTNAHVETLYHDIARMAFQFCLKYSRKTEFRKLCDKLR 209
           +C+E +  +  ++  + D+   A Q     S+KTEF K   KL+
Sbjct: 519 RCVESIVASKQIKKEFSDVCGEARQLRFSTSKKTEFEKAVRKLK 562


>U55373-8|AAD34666.1|  805|Caenorhabditis elegans Hypothetical
           protein F26F12.3b protein.
          Length = 805

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +3

Query: 78  QCLELLRTNAHVETLYHDIARMAFQFCLKYSRKTEFRKLCDKLR 209
           +C+E +  +  ++  + D+   A Q     S+KTEF K   KL+
Sbjct: 676 RCVESIVASKQIKKEFSDVCGEARQLRFSTSKKTEFEKAVRKLK 719


>U55373-7|AAC25890.2|  890|Caenorhabditis elegans Hypothetical
           protein F26F12.3a protein.
          Length = 890

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +3

Query: 78  QCLELLRTNAHVETLYHDIARMAFQFCLKYSRKTEFRKLCDKLR 209
           +C+E +  +  ++  + D+   A Q     S+KTEF K   KL+
Sbjct: 761 RCVESIVASKQIKKEFSDVCGEARQLRFSTSKKTEFEKAVRKLK 804


>Z82286-4|CAB05310.1|  468|Caenorhabditis elegans Hypothetical
           protein W02A2.7 protein.
          Length = 468

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 672 QPNVGPSQQGXYPXRQSDRAQGVEMAVAQTAPL 574
           Q  V P  Q   P +Q  R  GVE++  +TAPL
Sbjct: 150 QMGVMPHTQPAIPPQQQPRQVGVEISSTRTAPL 182


>AF016444-8|AAB65934.1|  219|Caenorhabditis elegans Hypothetical
           protein C36C5.12 protein.
          Length = 219

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +3

Query: 66  ESYCQCLELLRTNAHVETLYHDIARMAFQFCLKYSRKTEFRKLCDKLR 209
           E+YC+    ++T   +E L    A++      K S   EF+K CD L+
Sbjct: 46  ETYCELRSAIQTFLCIERLRDFAAKVDELDMDKKSELKEFKKTCDSLK 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,434,149
Number of Sequences: 27780
Number of extensions: 389054
Number of successful extensions: 1083
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)