Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_I07
(837 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 115 1e-26
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 90 4e-19
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 87 3e-18
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 78 2e-15
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 75 1e-14
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 75 1e-14
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 69 6e-13
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 69 8e-13
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 69 1e-12
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 66 8e-12
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 64 2e-11
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 60 4e-10
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 50 3e-07
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 31 0.27
SPCC757.05c |||acetylornithine deacetylase |Schizosaccharomyces ... 29 0.82
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 27 4.4
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 7.6
SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8 |... 26 7.6
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 115 bits (276), Expect = 1e-26
Identities = 44/84 (52%), Positives = 62/84 (73%)
Frame = +1
Query: 421 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPSSI 600
+ K +Q+ P +GF V L+ + ++FEWEV I GP DTLY+GG+F A + FP DYP P +
Sbjct: 13 QLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKM 72
Query: 601 RFLTKVWHPNVYENGDLCXSILHP 672
+F T++WHPNV+ NG++C SILHP
Sbjct: 73 KFTTEIWHPNVHPNGEVCISILHP 96
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 89.8 bits (213), Expect = 4e-19
Identities = 37/82 (45%), Positives = 52/82 (63%)
Frame = +1
Query: 421 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPSSI 600
EY L+E P+ RV L+ +DNLF W GP D++Y GG F +KFP DYP+ P +I
Sbjct: 15 EYSDLREHPIPDIRVNLV-DDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTI 73
Query: 601 RFLTKVWHPNVYENGDLCXSIL 666
F T+++HPN G++C +IL
Sbjct: 74 EFTTRIYHPNFDSEGNVCLAIL 95
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 87.0 bits (206), Expect = 3e-18
Identities = 44/113 (38%), Positives = 61/113 (53%)
Frame = +1
Query: 421 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPSSI 600
EYK L E +G ED+ F W+ I GP T ++GG + A +KFP DYP P ++
Sbjct: 13 EYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTL 72
Query: 601 RFLTKVWHPNVYENGDLCXSILHPARGMIFXLANCPAXXGXPTQSXXTXLXSV 759
+F + +HPNVY++G +C SILH A G + + P QS L SV
Sbjct: 73 KFECEFFHPNVYKDGTVCISILH-APGDDPNMYESSSERWSPVQSVEKILLSV 124
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 77.8 bits (183), Expect = 2e-15
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = +1
Query: 421 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPSSI 600
E L ++P +G+D LF W+ I GP D+ Y GG F + FP DYP+ P +
Sbjct: 9 ELADLGKDPPSSCSAGPVGDD-LFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKV 67
Query: 601 RFLTKVWHPNVYENGDLCXSIL 666
F T+++HPN+ NG +C IL
Sbjct: 68 NFTTRIYHPNINSNGSICLDIL 89
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 74.9 bits (176), Expect = 1e-14
Identities = 31/82 (37%), Positives = 48/82 (58%)
Frame = +1
Query: 421 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPSSI 600
++K +Q++P G + DN+ W I GP DT ++ G FK + F YP P +
Sbjct: 12 DFKRMQQDPPAGVSASPVS-DNVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLV 70
Query: 601 RFLTKVWHPNVYENGDLCXSIL 666
+F++ ++HPNVY NG+LC IL
Sbjct: 71 KFVSTMFHPNVYANGELCLDIL 92
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 74.9 bits (176), Expect = 1e-14
Identities = 35/82 (42%), Positives = 44/82 (53%)
Frame = +1
Query: 421 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPSSI 600
E SL G + NL W I GP DT Y+G FK M FP +YPYSP +I
Sbjct: 36 ELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTI 95
Query: 601 RFLTKVWHPNVYENGDLCXSIL 666
F + +WHPNV +G++C IL
Sbjct: 96 IFTSPMWHPNVDMSGNICLDIL 117
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 69.3 bits (162), Expect = 6e-13
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +1
Query: 484 NLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPSSIRFLTKVWHPNVYENGDLCXSI 663
+L W+V I G P T ++GG +K M FP +YP P RF ++HPNVY +G +C SI
Sbjct: 37 DLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSI 96
Query: 664 LHPARG 681
L+ G
Sbjct: 97 LNEEEG 102
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 68.9 bits (161), Expect = 8e-13
Identities = 32/82 (39%), Positives = 49/82 (59%)
Frame = +1
Query: 421 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPSSI 600
E ++L +P G V EDNL +++ + GP + Y+GG F + P +YP P ++
Sbjct: 10 EIETLTRDPPPGI-VAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNV 68
Query: 601 RFLTKVWHPNVYENGDLCXSIL 666
RFLTK++HPNV + G +C S L
Sbjct: 69 RFLTKIYHPNVDKLGRICLSTL 90
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 68.5 bits (160), Expect = 1e-12
Identities = 31/64 (48%), Positives = 40/64 (62%)
Frame = +1
Query: 421 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPSSI 600
EY +LQ+ PVE K E N+ EW I GPPDT Y+GG + + FPPDYP+ P +I
Sbjct: 13 EYLALQKNPVELVDAKPATE-NILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAI 71
Query: 601 RFLT 612
R +T
Sbjct: 72 RMIT 75
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 65.7 bits (153), Expect = 8e-12
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +1
Query: 472 LGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPSSIRFLTKVWHPNVYE-NGD 648
L DN+ E+ V GP +T Y GG +K H++ P +YP+ SI F+ +++HPN+ E +G
Sbjct: 24 LVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGS 83
Query: 649 LCXSILHPARGMIFXLAN 702
+C +++ +F + N
Sbjct: 84 VCLDVINQTWSPMFDMIN 101
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 64.5 bits (150), Expect = 2e-11
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +1
Query: 421 EYKSLQEEPVEGFRV-KLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPSS 597
EY S Q + G + K + + ++F W+ I GP +T Y+GG + + YP SP S
Sbjct: 11 EYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPS 70
Query: 598 IRFLTKVWHPNV-YENGDLCXSIL 666
+ F TK+ HPN+ + NG++C IL
Sbjct: 71 VYFQTKIVHPNISWTNGEVCMDIL 94
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 60.1 bits (139), Expect = 4e-10
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 421 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPSSI 600
E +Q++ G +V + +D + + GP T Y+GGYF ++ P DYP+ P +
Sbjct: 12 ELADVQQDKQAGIQVWTINDD-ISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKM 70
Query: 601 RFLTKVWHPNV-YENGDLCXSIL 666
F TK++HPNV + G +C IL
Sbjct: 71 NFDTKIYHPNVSSQTGAICLDIL 93
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 50.4 bits (115), Expect = 3e-07
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +1
Query: 517 PPDTLYQGGYFKAHMKFPPDYPYSPSSIRFLTKVWHPNVYENGDLCXSIL 666
P + Y+GG FK ++ +YP+ P ++ L K++HPN+ G++C +IL
Sbjct: 60 PDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNIL 109
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 30.7 bits (66), Expect = 0.27
Identities = 11/49 (22%), Positives = 25/49 (51%)
Frame = +1
Query: 487 LFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPSSIRFLTKVWHPNV 633
L +W I GP ++++ + + +YP +P + F++++ P V
Sbjct: 38 LSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGV 86
>SPCC757.05c |||acetylornithine deacetylase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 400
Score = 29.1 bits (62), Expect = 0.82
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 442 EPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKF 567
E ++G +K + +WEVAIFG P G K + +F
Sbjct: 186 EEIDGIGMKTVANKLNADWEVAIFGEPTENKLGVGHKGNFRF 227
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 26.6 bits (56), Expect = 4.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 222 LCLPKFLVRCYCDELKCLVDTWTA 293
LC+ + LV C C C+V +W A
Sbjct: 105 LCVNENLVVCGCSNSSCIVYSWNA 128
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.8 bits (54), Expect = 7.6
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -2
Query: 518 GPKIATSHSNRLSSPSN--LTRKPST 447
GP+ TS SN +SP+N T KPST
Sbjct: 230 GPRPTTSASNTNTSPANGAPTNKPST 255
>SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 391 EFSPQGL*XLEYKSLQEEPVEGFRVKLLG 477
EF P+ L + + LQE P++ +RV +LG
Sbjct: 200 EFRPEELKEVLAQVLQEIPLQDYRVPILG 228
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,169,474
Number of Sequences: 5004
Number of extensions: 66978
Number of successful extensions: 174
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 412451140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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