Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_I01
(1202 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 39 0.001
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 39 0.002
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 38 0.002
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 34 0.034
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.10
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.18
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.74
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.97
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 0.97
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 1.3
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 1.7
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 3.0
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 3.9
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.1 bits (87), Expect = 0.001
Identities = 21/74 (28%), Positives = 22/74 (29%)
Frame = +2
Query: 701 KXKTPPPPKXXPXXPXXXXXXPPPNPXXXNXPPXXXPPNPPXXPXNXXXPPXXXKTXPPP 880
+ TPP P P PP P PP PP P P P P
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Query: 881 KXXXNPQPKPXPXP 922
P P P P P
Sbjct: 471 PAAPAPPPAPAPAP 484
Score = 31.9 bits (69), Expect = 0.18
Identities = 22/93 (23%), Positives = 27/93 (29%)
Frame = +2
Query: 668 PPXXXXPPXKXKXKTPPPPKXXPXXPXXXXXXPPPNPXXXNXPPXXXPPNPPXXPXNXXX 847
P PP + PP+ P PPP P N P +PP
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPA---PPPIPPPSNGTVSSPPNSPPRPIAPVSM 280
Query: 848 PPXXXKTXPPPKXXXNPQPKPXPXPXKTKXPPP 946
P T PP + + K PPP
Sbjct: 281 NPAINSTSKPPLPPPSSRVSAAALAANKKRPPP 313
Score = 31.9 bits (69), Expect = 0.18
Identities = 20/87 (22%), Positives = 22/87 (25%)
Frame = +2
Query: 686 PPXKXKXKTPPPPKXXPXXPXXXXXXPPPNPXXXNXPPXXXPPNPPXXPXNXXXPPXXXK 865
PP P P P P + PP P PP P P
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Query: 866 TXPPPKXXXNPQPKPXPXPXKTKXPPP 946
+ P P P P PPP
Sbjct: 452 SAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 30.7 bits (66), Expect = 0.42
Identities = 24/92 (26%), Positives = 26/92 (28%)
Frame = +2
Query: 686 PPXKXKXKTPPPPKXXPXXPXXXXXXPPPNPXXXNXPPXXXPPNPPXXPXNXXXPPXXXK 865
PP +T PP P P PP + PP P P P PP
Sbjct: 404 PPLGNASRTSTPP--VPTPPSLPPSAPP------SLPPSAPPSLPMGAPAAPPLPPSAPI 455
Query: 866 TXPPPKXXXNPQPKPXPXPXKTKXPPPXXXNP 961
P P P P P P P P
Sbjct: 456 APPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 30.3 bits (65), Expect = 0.56
Identities = 23/81 (28%), Positives = 27/81 (33%), Gaps = 1/81 (1%)
Frame = +2
Query: 707 KTPPPPKXXPXXPXXXXXXPPPNPXXXNXPPXXXPPNPPXXPXNXXXP-PXXXKTXPPPK 883
K PPPP P PP + PP PP P P ++ PPP
Sbjct: 309 KRPPPPPP----PSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPP- 363
Query: 884 XXXNPQPKPXPXPXKTKXPPP 946
P P P + PPP
Sbjct: 364 ------PPPRSAPSTGRQPPP 378
Score = 28.7 bits (61), Expect = 1.7
Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 6/60 (10%)
Frame = +3
Query: 660 PPPPPXXXX------PPXXXXKKPPPPPKXXXXXXTXXXXPPPXTPXXXTXPXXXXPQTP 821
PPPPP PP PPPPP+ T PP + + P P P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPR--SAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 26.6 bits (56), Expect = 6.9
Identities = 30/120 (25%), Positives = 35/120 (29%), Gaps = 17/120 (14%)
Frame = +2
Query: 653 KKXPXPPXXXXPPXKXKXKTPP----------PPKXXPXXPXXXXXXPPPNPXXXNXPPX 802
KK P PP PP + PP PP P P P P + PP
Sbjct: 308 KKRPPPPP---PPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLP-PQGRSAPP- 362
Query: 803 XXPPNPPXXPXNXXXPPXXXKTX-------PPPKXXXNPQPKPXPXPXKTKXPPPXXXNP 961
PP P P PP + PPP P P ++ P P
Sbjct: 363 --PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 38.7 bits (86), Expect = 0.002
Identities = 28/100 (28%), Positives = 31/100 (31%), Gaps = 5/100 (5%)
Frame = +2
Query: 662 PXPPXXXXPPXKXKXKTPPPPKXXPXXPXXXXXXPPPNPXXXNXP-PXXXPPNP-PXXPX 835
P P PP TPP PK P P P+ + P P PP P P
Sbjct: 1033 PIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIP 1092
Query: 836 NXXXPPXXXKTXPPPKXXXNPQPKP---XPXPXKTKXPPP 946
P P P P P P P P + PP
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP 1132
Score = 37.1 bits (82), Expect = 0.005
Identities = 27/100 (27%), Positives = 30/100 (30%), Gaps = 5/100 (5%)
Frame = +2
Query: 662 PXP-PXXXXPPXKXKXKTPPPPKXX---PXXPXXXXXXPPPNPXXXNXPPXXXPPN-PPX 826
P P P PP PP PK P P PP PP P PP
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPV 1200
Query: 827 XPXNXXXPPXXXKTXPPPKXXXNPQPKPXPXPXKTKXPPP 946
+ PP + PP + P P P P P
Sbjct: 1201 PKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 36.7 bits (81), Expect = 0.006
Identities = 26/99 (26%), Positives = 29/99 (29%), Gaps = 4/99 (4%)
Frame = +2
Query: 662 PXPPXXXXPPX-KXKXKTPPPPKXX---PXXPXXXXXXPPPNPXXXNXPPXXXPPNPPXX 829
P P PP K PP PK P P P P P P PP
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Query: 830 PXNXXXPPXXXKTXPPPKXXXNPQPKPXPXPXKTKXPPP 946
+ PP + PP + P P P P P
Sbjct: 1144 KPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 35.9 bits (79), Expect = 0.011
Identities = 30/102 (29%), Positives = 32/102 (31%), Gaps = 8/102 (7%)
Frame = +2
Query: 662 PXP-PXXXXPPXKXKXKTPPPPKX---XPXXPXXXXXXPPPNPXXXNXPPXXXPPNPPXX 829
P P P PP PP PK P P P P P PP P P
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVA-APPVPAPSGAPPV 1161
Query: 830 PXNXXXPPXXXKTXPPPKXXXNPQPKP----XPXPXKTKXPP 943
P P P P P PKP P P ++ PP
Sbjct: 1162 P----KPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 33.5 bits (73), Expect = 0.060
Identities = 23/90 (25%), Positives = 27/90 (30%), Gaps = 5/90 (5%)
Frame = +2
Query: 689 PXKXKXKTPPPPKXXPXXPXXXXXXP--PPNPXXXNXPPXXXPPNPPXXPXNXXXPPXXX 862
P + PP PK P PP P PP P + P P + P
Sbjct: 1004 PAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAP 1063
Query: 863 KTXPPPKXXXNPQPKP---XPXPXKTKXPP 943
P P P P P P + PP
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Score = 33.1 bits (72), Expect = 0.079
Identities = 28/107 (26%), Positives = 29/107 (27%), Gaps = 7/107 (6%)
Frame = +2
Query: 662 PXPPXXXXPPXKXKXKTPPP---PKXXPXXPXXXXXXPPPNPXXXNXPPXXXPP--NPPX 826
P P PP PP P P P PP P PP P PP
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPV-PAPSGAPPVPKPSVAAPPV 1171
Query: 827 XPXNXXXPPXXXKTX--PPPKXXXNPQPKPXPXPXKTKXPPPXXXNP 961
+ PP PP P P P PPP P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 31.9 bits (69), Expect = 0.18
Identities = 22/84 (26%), Positives = 25/84 (29%), Gaps = 6/84 (7%)
Frame = +2
Query: 713 PPPPKXXPXXPXXXXXXPPPNPXXXNXPPXXXPPNP------PXXPXNXXXPPXXXKTXP 874
PP P P PP P + P PP P P P PP +
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGI 1091
Query: 875 PPKXXXNPQPKPXPXPXKTKXPPP 946
PP + P P P P P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVP 1115
Score = 31.5 bits (68), Expect = 0.24
Identities = 26/95 (27%), Positives = 29/95 (30%), Gaps = 8/95 (8%)
Frame = +2
Query: 662 PXP-PXXXXPPXKXKXKTP--PPPKXXPXXPXXXXXXP---PPNPXXXNXPPXXXPP--N 817
P P P P K P PPP P P PP P PP P
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAA 1101
Query: 818 PPXXPXNXXXPPXXXKTXPPPKXXXNPQPKPXPXP 922
PP + PP + PP + P P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Score = 31.5 bits (68), Expect = 0.24
Identities = 29/133 (21%), Positives = 33/133 (24%), Gaps = 3/133 (2%)
Frame = +3
Query: 528 PXTPKPXPXPPTXXPPXXXXXXXXXXXXXXXXKNXTXXXXXXKXPPPPPXXXXPPXXXXK 707
P P P P PP P P P PP
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPS 1195
Query: 708 KPPPPPKXXXXXXTXXXXPPPXTPXXXTXPXXXXPQTPQXXXXTXXXP-PXXXKP--XXP 878
+ PP PK PPP T P P P P P P P
Sbjct: 1196 EAPPVPKPSVG---VPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTP 1252
Query: 879 QXKXXTPNXNPXP 917
+ +P+ N P
Sbjct: 1253 RSSVPSPHSNASP 1265
Score = 29.9 bits (64), Expect = 0.74
Identities = 24/99 (24%), Positives = 27/99 (27%), Gaps = 4/99 (4%)
Frame = +2
Query: 662 PXPPXXXXPPXKXKXKTPPPPKX---XPXXPXXXXXXPPPNPXXXNXPPXXXPPN-PPXX 829
P P P PP PK P P P P P PP P PP
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP-SVGVPPVPPPSTAPPVP 1220
Query: 830 PXNXXXPPXXXKTXPPPKXXXNPQPKPXPXPXKTKXPPP 946
+ PP T P P ++ P P
Sbjct: 1221 TPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSP 1259
Score = 29.1 bits (62), Expect = 1.3
Identities = 19/87 (21%), Positives = 22/87 (25%)
Frame = +2
Query: 686 PPXKXKXKTPPPPKXXPXXPXXXXXXPPPNPXXXNXPPXXXPPNPPXXPXNXXXPPXXXK 865
P + + P P P P P P P P P P PP
Sbjct: 1067 PAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Query: 866 TXPPPKXXXNPQPKPXPXPXKTKXPPP 946
+ P P P P P P
Sbjct: 1127 SVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
Score = 28.7 bits (61), Expect = 1.7
Identities = 21/82 (25%), Positives = 23/82 (28%), Gaps = 1/82 (1%)
Frame = +2
Query: 719 PPKXXPXXPXXXXXXPPPNPXXXNXPPXXXPPNPPXXPXNXXXPPXXXKTXPP-PKXXXN 895
PP P P P + PP PP+ P P PP PK
Sbjct: 966 PPSIPPPLPVSNILSSPTSE-----PPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSK 1020
Query: 896 PQPKPXPXPXKTKXPPPXXXNP 961
P P P P P P
Sbjct: 1021 APPVPLPSADAPPIPVPSTAPP 1042
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 38.3 bits (85), Expect = 0.002
Identities = 25/67 (37%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = -1
Query: 854 GGXXXGXXGXLGGLGXXXXGXGXXXGGXGG--GXXXXGXGGXXXFWGGGGFFXXXXGGGX 681
G G G GG G G G GG GG G GG F GG G F GG
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFG 262
Query: 680 XXXGGXG 660
GG G
Sbjct: 263 GGPGGHG 269
Score = 35.5 bits (78), Expect = 0.015
Identities = 21/55 (38%), Positives = 22/55 (40%)
Frame = -1
Query: 872 GXFXXXGGXXXGXXGXLGGLGXXXXGXGXXXGGXGGGXXXXGXGGXXXFWGGGGF 708
G GG G G GG G G G GG GGG G GG GG G+
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGG--PGGFGGGPGGHGGPGW 273
Score = 34.7 bits (76), Expect = 0.026
Identities = 23/59 (38%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = -1
Query: 878 GXGXFXXXG---GXXXGXXGXLGGLGXXXXGXGXXXGGXGGGXXXXGXGGXXXFWGGGG 711
G G F G G G G GG G G GG GGG G GG F GG G
Sbjct: 209 GFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG-GGPGGFGGGPG 266
Score = 32.3 bits (70), Expect = 0.14
Identities = 24/64 (37%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Frame = -3
Query: 945 GGGF--FVXXGXGXGXGWGFXXXFGG-GXVXXXXGGXXXXXGXXGGFGGXXXGGXFXXXG 775
GGGF F G G G FGG G GG G GGF G G G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 774 XGGG 763
GGG
Sbjct: 247 FGGG 250
Score = 30.7 bits (66), Expect = 0.42
Identities = 24/67 (35%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Frame = -3
Query: 960 GFXXXGGGFFVXXGXGXGXGWGFXXXFGG--GXVXXXXGGXXXXXGXXGGFGGXXXGGXF 787
GF GG F G G GF GG G GG G GGFGG G
Sbjct: 206 GFGGFGG--FGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGG 263
Query: 786 XXXGXGG 766
G GG
Sbjct: 264 GPGGHGG 270
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = -3
Query: 876 GGXVXXXXGGXXXXXGXXGGFGGXXXGGXFXXXGXGGGXFXXXXGXXXXXXXXXXXXXFX 697
GG GG GGFGG G G G F G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 696 FXGGXXXXGG 667
F GG GG
Sbjct: 247 FGGGLGGFGG 256
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 34.3 bits (75), Expect = 0.034
Identities = 25/86 (29%), Positives = 27/86 (31%)
Frame = +2
Query: 686 PPXKXKXKTPPPPKXXPXXPXXXXXXPPPNPXXXNXPPXXXPPNPPXXPXNXXXPPXXXK 865
PP TP P PPP+P P PP P P P K
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP-PAQPAAPVK 182
Query: 866 TXPPPKXXXNPQPKPXPXPXKTKXPP 943
+ PP P P P P K PP
Sbjct: 183 S--PPSAPSLPSAVP-PMPPKVPPPP 205
Score = 33.9 bits (74), Expect = 0.045
Identities = 21/84 (25%), Positives = 24/84 (28%)
Frame = +2
Query: 695 KXKXKTPPPPKXXPXXPXXXXXXPPPNPXXXNXPPXXXPPNPPXXPXNXXXPPXXXKTXP 874
K PP P P P P + PP P+P P P + P
Sbjct: 117 KSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPP----PSPASAPPIPSKAPPIPSSLP 172
Query: 875 PPKXXXNPQPKPXPXPXKTKXPPP 946
PP P P P PP
Sbjct: 173 PPAQPAAPVKSPPSAPSLPSAVPP 196
Score = 32.7 bits (71), Expect = 0.10
Identities = 22/77 (28%), Positives = 25/77 (32%), Gaps = 4/77 (5%)
Frame = +2
Query: 662 PXPPXXXXPPXKXKXKTP-PPPKXXPXXPXXXXXXPPPN---PXXXNXPPXXXPPNPPXX 829
P P PP + PPP P P P+ P P PP+ P
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSL 190
Query: 830 PXNXXXPPXXXKTXPPP 880
P PP K PPP
Sbjct: 191 P--SAVPPMPPKVPPPP 205
Score = 31.1 bits (67), Expect = 0.32
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +1
Query: 739 PPXPXXKXPPPXPPXXKPXPXXXXPKPPXXPXXPXXXPPXXXNXPXPKXXXKPPTXT 909
PP P P P P PP P P PP P P P T
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANT 214
Score = 29.9 bits (64), Expect = 0.74
Identities = 15/57 (26%), Positives = 16/57 (28%)
Frame = +1
Query: 748 PXXKXPPPXPPXXKPXPXXXXPKPPXXPXXPXXXPPXXXNXPXPKXXXKPPTXTXXP 918
P PP P P P+P P P PP P PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 29.5 bits (63), Expect = 0.97
Identities = 23/86 (26%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = +2
Query: 668 PPXXXXPPXKXKXKTPP---PPKXXPXXPXXXXXXPPPNPXXXNXPPXXXPPNPPXXPXN 838
PP PP PP PP+ P P PP P PP PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPR--PSIPPPSPASAPPIPS--KAPPIPSSLPPPAQPAA 179
Query: 839 XXXPPXXXKTXPPPKXXXNPQPKPXP 916
P + P P+ P P
Sbjct: 180 PVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 28.7 bits (61), Expect = 1.7
Identities = 20/81 (24%), Positives = 22/81 (27%)
Frame = +3
Query: 669 PPXXXXPPXXXXKKPPPPPKXXXXXXTXXXXPPPXTPXXXTXPXXXXPQTPQXXXXTXXX 848
PP PP PP P K + PPP P P P P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSS---LPPPAQP---AAPVKSPPSAPSLPSAVPPM 197
Query: 849 PPXXXKPXXPQXKXXTPNXNP 911
PP P Q + P
Sbjct: 198 PPKVPPPPLSQAPVANTSSRP 218
Score = 28.3 bits (60), Expect = 2.2
Identities = 14/53 (26%), Positives = 14/53 (26%)
Frame = +1
Query: 739 PPXPXXKXPPPXPPXXKPXPXXXXPKPPXXPXXPXXXPPXXXNXPXPKXXXKP 897
PP P PP P P PP P P P P P
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/83 (22%), Positives = 22/83 (26%)
Frame = +3
Query: 663 PPPPXXXXPPXXXXKKPPPPPKXXXXXXTXXXXPPPXTPXXXTXPXXXXPQTPQXXXXTX 842
PP P PP +P P K + PP P P P +
Sbjct: 165 PPIPSSLPPPA----QPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSS 220
Query: 843 XXPPXXXKPXXPQXKXXTPNXNP 911
PP P PN P
Sbjct: 221 FAPPAGHAPNVTSESPKFPNRGP 243
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.7 bits (71), Expect = 0.10
Identities = 23/83 (27%), Positives = 26/83 (31%), Gaps = 4/83 (4%)
Frame = +2
Query: 695 KXKXKTPPPPK---XXPXXPXXXXXXPPPNPXXXNXPPXXXPPN-PPXXPXNXXXPPXXX 862
K K+PPPP P PPP P PP PP P PP
Sbjct: 726 KLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAV 785
Query: 863 KTXPPPKXXXNPQPKPXPXPXKT 931
PQ +P P +T
Sbjct: 786 SAGGSRYYAPAPQAEPEPKIDET 808
Score = 32.7 bits (71), Expect = 0.10
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 660 PPPPPXXXXPPXXXXKKPPPPPKXXXXXXTXXXXPPPXTP 779
P P P PP PPPPP PPP P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.5 bits (68), Expect = 0.24
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +2
Query: 653 KKXPXPPXXXXPPXKXKXKTPPPPKXXPXXPXXXXXXPPPNPXXXNXPPXXXPPNPP 823
K P PP P P PP P PPP P P PP PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPP---PAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.9 bits (64), Expect = 0.74
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 809 PPNPPXXPXNXXXPPXXXKTXPPPKXXXNPQPKPXPXPXKTKXPPPXXXNP 961
PP PP P PP P P P P PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.9 bits (64), Expect = 0.74
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +2
Query: 686 PPXKXKXKTPPPPKXXPXXPXXXXXXPPPNPXXXNXPPXXXPPNPPXXP 832
PP TP P P PPP P PP PP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +3
Query: 660 PPPPPXXXXPPXXXXKKPPPPPKXXXXXXTXXXXPPP 770
PPPPP PPPPP + P P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 27.5 bits (58), Expect = 3.9
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 809 PPNPPXXPXNXXXPPXXXKTXPPPKXXXNPQPKPXPXPXKTKXPPPXXXNP 961
PP PP P P P P P P P PPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 5.2
Identities = 16/53 (30%), Positives = 16/53 (30%), Gaps = 5/53 (9%)
Frame = +1
Query: 757 KXPPPXPPXX-----KPXPXXXXPKPPXXPXXPXXXPPXXXNXPXPKXXXKPP 900
K PPP PP P P P P P PP P PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.18
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +2
Query: 797 PXXXPPNPPXXPXNXXXPPXXXKTXPPPKXXXNPQPKPXPXPXKTKXPPP 946
P PP P + P T PPP P P P P PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 31.5 bits (68), Expect = 0.24
Identities = 19/68 (27%), Positives = 21/68 (30%)
Frame = +2
Query: 743 PXXXXXXPPPNPXXXNXPPXXXPPNPPXXPXNXXXPPXXXKTXPPPKXXXNPQPKPXPXP 922
P PP P PP P PP P + PP P P + P P P
Sbjct: 1683 PAHPVSTPPVRPQSA-APPQMSAPTPPPPPMSVPPPP---SAPPMPAGPPSAPPPPLPAS 1738
Query: 923 XKTKXPPP 946
P P
Sbjct: 1739 SAPSVPNP 1746
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/55 (29%), Positives = 19/55 (34%)
Frame = +2
Query: 710 TPPPPKXXPXXPXXXXXXPPPNPXXXNXPPXXXPPNPPXXPXNXXXPPXXXKTXP 874
TPP P PPP P + PP P P P + PP + P
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPM--SVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 29.1 bits (62), Expect = 1.3
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Frame = +3
Query: 660 PPPPPXXXXPPXXXXKKPPPPPKXXXXXXTXXXXP--PPXTPXXXTXPXXXXPQTP 821
PP P PP PPPPP + P PP P P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP-PPPLPASSAPSVP 1744
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +1
Query: 739 PPXPXXKXPPPXPPXXKPXPXXXXPKPPXXPXXPXXXPPXXXNXPXP 879
P P PP P P P PP P P PP P P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP-AGPPSAPPPPLP 1736
Score = 27.9 bits (59), Expect = 3.0
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +2
Query: 662 PXPPXXXXPPXKXKXKTPPPPKXXPXXPXXXXXXPPPNPXXXNXPPXXXPPNPP 823
P P PP PPPP P PP P PP PP P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVP--------PPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 3.9
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +2
Query: 668 PPXXXXPPXKXKXKTPPPPKXXPXXPXXXXXXPPPNPXXXNXPPXXXPPNP 820
PP P + PPP P P PPP P + P PNP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP-PLPASSAPSV--PNP 1746
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.74
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 660 PPPPPXXXXPPXXXXKKPPPPP 725
PPPPP PP + PPPPP
Sbjct: 11 PPPPPPGFEPPS---QPPPPPP 29
Score = 27.9 bits (59), Expect = 3.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 660 PPPPPXXXXPPXXXXKKPPPP 722
PPPPP P PPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 5.2
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +1
Query: 748 PXXKXPPPXPPXXKPXPXXXXPKPP 822
P PPP PP +P P PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 764 PPPNPXXXNXPPXXXPPNPPXXP 832
PP NP PP PP+ P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.97
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = +2
Query: 713 PPPPKXXPXXPXXXXXXPPPNPXXXNXPPXXXPPNPPXXPXNXXXPPXXXKT 868
PPPP P P P+ N P PP P PP T
Sbjct: 240 PPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPPTNAST 291
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/55 (25%), Positives = 15/55 (27%)
Frame = +3
Query: 528 PXTPKPXPXPPTXXPPXXXXXXXXXXXXXXXXKNXTXXXXXXKXPPPPPXXXXPP 692
P P P PP PP +N PPPP PP
Sbjct: 229 PKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPP 283
Score = 27.9 bits (59), Expect = 3.0
Identities = 15/48 (31%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = +3
Query: 660 PPPPPXXXXPP--XXXXKKPPPPPKXXXXXXTXXXXPPPXTPXXXTXP 797
PPPPP PP + P P PPP TP P
Sbjct: 238 PPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRP 285
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.5 bits (63), Expect = 0.97
Identities = 25/98 (25%), Positives = 27/98 (27%), Gaps = 3/98 (3%)
Frame = +2
Query: 662 PXPPXXXXPPXKXKXKTPPPPKXXPXXPXXXXXXPPPNPXXXNXPPXXXPPNPPXXPXNX 841
P PP P PP P P P P P P PP P
Sbjct: 590 PQPPVAPVVPEAPSVPQPPVAPVAPEVPSV-----PQRPAVPVVPEAPSVPQPPAAPVVP 644
Query: 842 XXPPXXXKTXPP--PKXXXNPQPKPXP-XPXKTKXPPP 946
P + P P+ PQP P P P P
Sbjct: 645 EVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQP 682
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.1 bits (62), Expect = 1.3
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -3
Query: 915 GXGXGWGFXXXFGGGXVXXXXGGXXXXXGXXGGFGGXXXGGXFXXXGXGG 766
G G G FGGG GG G GG GG G G GG
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.7 bits (61), Expect = 1.7
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -1
Query: 851 GXXXGXXGXLGGLGXXXXGXGXXXGGXGGGXXXXGXGGXXXFWGGG 714
G G G GG G G G GG GG GG +GGG
Sbjct: 129 GARNGPAGR-GGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGG 173
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.9 bits (59), Expect = 3.0
Identities = 22/72 (30%), Positives = 22/72 (30%)
Frame = +2
Query: 662 PXPPXXXXPPXKXKXKTPPPPKXXPXXPXXXXXXPPPNPXXXNXPPXXXPPNPPXXPXNX 841
P PP PP PP P P P PP P PP P P P
Sbjct: 492 PLPPTTFAPPG---VPLPPIP-GAPGMPNLNMSQPPMVPPGMALPPGMPAPF-PGYPAVP 546
Query: 842 XXPPXXXKTXPP 877
P T PP
Sbjct: 547 AMPGIPGATAPP 558
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 27.5 bits (58), Expect = 3.9
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +2
Query: 764 PPPNPXXXNXPPXXXPPNPPXXPXNXXXPPXXXKTXPPPKXXXNPQPKPXP 916
PPP P N PP PP PP + P P PQ P
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPP---QQAPYPPVQAYPQAPQQP 253
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.302 0.134 0.458
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,598,933
Number of Sequences: 5004
Number of extensions: 26227
Number of successful extensions: 311
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 649451332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.6 bits)
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