Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_H22
         (864 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-52|CAB16507.3|  512|Caenorhabditis elegans Hypothetical p...    31   1.4  
AF038613-12|AAB92046.3|  328|Caenorhabditis elegans Hypothetical...    30   2.4  
AC024136-6|AAF35965.3|  425|Caenorhabditis elegans Hypothetical ...    30   2.4  
AL132862-14|CAB60548.1|  541|Caenorhabditis elegans Hypothetical...    29   3.2  
AL023828-22|CAA19467.2|  272|Caenorhabditis elegans Hypothetical...    29   4.3  
AF022973-4|AAC25798.1|  314|Caenorhabditis elegans Temporarily a...    29   5.7  
AF016688-6|AAB66074.2|  274|Caenorhabditis elegans Hypothetical ...    29   5.7  
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    28   9.9  

>Z99281-52|CAB16507.3|  512|Caenorhabditis elegans Hypothetical
           protein Y57G11C.5 protein.
          Length = 512

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 596 GNAVRVPPAAALVHWQGLRPGRDGI 522
           G + + PP A+L HW  LR G +GI
Sbjct: 304 GQSQKAPPMASLWHWAHLRVGSEGI 328


>AF038613-12|AAB92046.3|  328|Caenorhabditis elegans Hypothetical
           protein F42A6.1 protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 198 MFCAHADARKPMNRSLYIFGYYSQNITLTISNSQCS 91
           ++C  +DAR    R   +    S  +TLT+S S+C+
Sbjct: 25  LWCILSDARNRNRREFLLVASQSVTVTLTVSTSECA 60


>AC024136-6|AAF35965.3|  425|Caenorhabditis elegans Hypothetical
           protein F54A3.1 protein.
          Length = 425

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 22/67 (32%), Positives = 31/67 (46%)
 Frame = +1

Query: 349 ARPPTAKKGSASAITCAMRPITPLSLTEQTSSI*ESAVARVHRTSTSAVWLPTRDRQQIP 528
           ARP T+  G A+      R   P + +   +    SA + V R  T A  + +  R + P
Sbjct: 355 ARPQTSS-GIAAPGAPRSRIAMPTTSSSSLARRPGSASSSVPRVPTGAASMTSSSRIRPP 413

Query: 529 SRPGRRP 549
           SRPG RP
Sbjct: 414 SRPGSRP 420


>AL132862-14|CAB60548.1|  541|Caenorhabditis elegans Hypothetical
           protein Y73F8A.20 protein.
          Length = 541

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 596 GNAVRVPPAAALVHWQGLRPGRDGI 522
           G + + PP A+L HW  L+ G  GI
Sbjct: 329 GQSQKAPPMASLWHWASLKVGSSGI 353


>AL023828-22|CAA19467.2|  272|Caenorhabditis elegans Hypothetical
           protein Y17G7B.19 protein.
          Length = 272

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +3

Query: 396 CNAANNTIITDGTNVIDIRVGSGPCSSYIDVCCLAPDQRP 515
           C +  ++I + G    ++ +  GPCS++ID C   PD+ P
Sbjct: 101 CYSKKSSICSTGGTPFEVELSDGPCSNHID-C--NPDELP 137


>AF022973-4|AAC25798.1|  314|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 57 protein.
          Length = 314

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 21/76 (27%), Positives = 35/76 (46%)
 Frame = +1

Query: 13  FVIPVSGRTWLTLSRTRKIL*PVTSRRALRVRYC*CDVLRIISKDVQASIHRLSRVGVRA 192
           F I +  RT   L +T+K +  +     + VRY  CD  R+  +D +  +H L+ V +  
Sbjct: 78  FNIFLISRTKSKLVKTKKQI--LNKYSDIEVRYAICDFTRVSYEDYKRLLHSLNEVDIGI 135

Query: 193 EHGHRGSGVDH*SDLH 240
              + G   D+   LH
Sbjct: 136 LINNVGMCFDNPEVLH 151


>AF016688-6|AAB66074.2|  274|Caenorhabditis elegans Hypothetical
           protein F18A12.2 protein.
          Length = 274

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = +3

Query: 237 SHQRSPRTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQ 368
           +  + PRT L+P T P  + +AP++    ++TN  ++     G+
Sbjct: 224 NEMKKPRTTLKPSTAPPESSKAPASTGTTLATNPTITGPPGTGK 267


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +3

Query: 726  GRLADPSERGAHGPXTTLPPPRN*KXXPXXGXPXXXG 836
            GR   P  RG + P   +PPP      P  G P   G
Sbjct: 1464 GRGGPPPPRGMNSPMRGMPPPMRGGGPPMRGGPPMRG 1500


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,526,848
Number of Sequences: 27780
Number of extensions: 397530
Number of successful extensions: 1364
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1364
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)