Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_H13
(890 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 39 0.001
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 38 0.002
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 37 0.003
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 36 0.010
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 33 0.055
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 32 0.13
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 31 0.17
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 31 0.22
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 30 0.38
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 29 0.67
SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomy... 29 1.2
SPAC222.15 |meu13|SPAC821.01|Tat binding protein 1|Schizosacchar... 28 2.1
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 28 2.1
SPAC637.11 |suv3||ATP-dependent RNA helicase Suv3|Schizosaccharo... 28 2.1
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei... 27 2.7
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 27 3.6
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 3.6
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 27 3.6
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 26 6.3
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 26 6.3
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 26 6.3
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 26 6.3
SPCC364.06 |nap1||nucleosome assembly protein Nap1 |Schizosaccha... 26 6.3
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 26 8.3
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 26 8.3
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 38.7 bits (86), Expect = 0.001
Identities = 45/207 (21%), Positives = 87/207 (42%), Gaps = 6/207 (2%)
Frame = +3
Query: 72 SEDLELDFKLNVDTVGKLEEEFTVARLHISKMKSEVKNIVQRCHSLESANIDANQKIEEY 251
+ DL+L+ + D + L E + + +K++ KN+ + + E+ +A QK+
Sbjct: 324 NRDLKLETEKLQDQIKALLERNQSLQEALETVKNDEKNLREMNANYETEMKEARQKLNNK 383
Query: 252 ERTLGECRLLISQHEARCASLAESMREAENK---KRQLEEAADALREECARLQAAERVQL 422
E + E + + L+ES+RE + + E D L +E ++Q++ +
Sbjct: 384 EALISHYDDDFRAKELKISRLSESLREKAGLLEFQSSVSEQRDLLYQE--QIQSSIKDME 441
Query: 423 AAAEDSQVRGXXXXXXXXXXXXHSTQLSALRDELAALQRQHQDLKDTYQELTLARQQLQD 602
++ S+++ L +E+ L+ + DT LT R LQ
Sbjct: 442 NVFRKNEYLMEELNELKNNLEVESSKVLRLDEEMKCLKDEQLSQFDTVFSLTDERDGLQK 501
Query: 603 DYEKLK---REEADKSAXLKELIQSVE 674
D + K +E +SA LK I+ E
Sbjct: 502 DLKNTKGNLDDEIGRSAFLKSQIRDQE 528
Score = 26.2 bits (55), Expect = 6.3
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Frame = +3
Query: 126 EEEFTVARLHIS-KMKSEVKNIVQRCHSLESANIDA-NQKIEE----YERTLGECRLLIS 287
++E T+ +LH S + S+ N +Q S ++A +++ N K+ E E E +L
Sbjct: 526 DQELTIEKLHDSLETLSQTNNSLQCEISEKNAELNSVNSKLSEGRAHLETANKENEILKQ 585
Query: 288 Q---HEARCASLAESMREAENKKRQLEEAADALREECARLQAAERVQLAAAE 434
Q E++ ASL S + NKK L + A+ ++ + +E
Sbjct: 586 QLELSESKLASLLNSYQSFINKKEHLYSFLQLVEPSFAKSDSSNATESQISE 637
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 37.9 bits (84), Expect = 0.002
Identities = 28/123 (22%), Positives = 55/123 (44%)
Frame = +3
Query: 318 ESMREAENKKRQLEEAADALREECARLQAAERVQLAAAEDSQVRGXXXXXXXXXXXXHST 497
+ +RE E K+ + ++ A EE R +A + AA + + +
Sbjct: 589 KKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEARKKREEQRLKR 648
Query: 498 QLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYEKLKREEADKSAXLKELIQSVER 677
+ + EL +R+ + K +E L +QQ + D EK+ RE+ + K +++ +R
Sbjct: 649 EQEKKQQELERQKREEKQ-KQKEREKKLKKQQQEADREKMAREQRLREEEEKRILEERKR 707
Query: 678 REQ 686
RE+
Sbjct: 708 REK 710
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 37.1 bits (82), Expect = 0.003
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 8/214 (3%)
Frame = +3
Query: 159 SKMKSEVKNIVQRCHSLESAN----IDANQKIEEYERTLGECRLLISQHEARCASLAESM 326
S++K E+ ++ Q E+ A +K + + T+ + L Q+ L E
Sbjct: 449 SQLKDEITSLKQTVSESEAERKRLFSSAQEKQLQMKETVNKLTSLQEQNNEFDRQLKEQE 508
Query: 327 REAENKKRQLEEAADALREECARLQAAE-RVQLAAAEDSQVRGXXXXXXXXXXXXHSTQL 503
+ +NK+ +L E LRE+ Q V+ E ++ + TQ+
Sbjct: 509 EDLQNKEEELTELRKLLREQTQDSQKLRLLVEQLELERQDLKQAGENHYSNLSSDYETQI 568
Query: 504 SALRDELAALQRQHQDLKDTYQELTLARQQLQDDYEKLKREEADKSAXLKELIQSVER-- 677
+L L Q + ++ EL Q D KLK EA+K +EL S E
Sbjct: 569 KSLESSLTNSQAECVSFQEKINEL-----NSQIDELKLKLNEANKK--YQELAISFENSN 621
Query: 678 -REQARADLKGLXXTWLRNXXPAXLRNSLVXTCR 776
+ Q+ GL L+N L+N T R
Sbjct: 622 VKTQSVEPDNGLSLEALKNENQTLLKNLEDSTAR 655
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 35.5 bits (78), Expect = 0.010
Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 5/204 (2%)
Frame = +3
Query: 108 DTVGKLEEEFTVARLHISKMKSEVKNIVQRCHSLESANIDANQKIEEYERTLGECRLLIS 287
+ + LEE + I+++ S +++ + L++ NQ+I E L E LI
Sbjct: 1362 ENIHSLEEGKEETKKEIAELSSRLEDNQLATNKLKNQLDHLNQEIRLKEDVLKEKESLII 1421
Query: 288 QHEARCASLAESMREAENKKRQLEEAA-DALREECARLQAAERVQLAAAEDSQVRGXXXX 464
E ++ + + K +LE D R+ + ++ E + + + S
Sbjct: 1422 SLEESLSNQRQKESSLLDAKNELEHMLDDTSRKNSSLMEKIESINSSLDDKSFELASAVE 1481
Query: 465 XXXXXXXXHSTQLSALRDELAALQRQHQDL---KDTYQELTLARQQLQDDYE-KLKREEA 632
HS LS + + + LQ + + + T QEL +++YE KL
Sbjct: 1482 KLGALQKLHSESLSLMENIKSQLQEAKEKIQVDESTIQELDHEITASKNNYEGKLN---- 1537
Query: 633 DKSAXLKELIQSVERREQARADLK 704
DK + +++L +++E+ A+ K
Sbjct: 1538 DKDSIIRDLSENIEQLNNLLAEEK 1561
Score = 31.1 bits (67), Expect = 0.22
Identities = 39/203 (19%), Positives = 80/203 (39%), Gaps = 7/203 (3%)
Frame = +3
Query: 114 VGKLEEEFTVARLHISKMKSEVKNIVQRCHSLESANIDANQKIEEYERTL----GECRLL 281
+ K ++E R I + K ++ SL+ ++ +K E YE L GE +
Sbjct: 485 IDKKDQELNNLREQIKEQKKVSESTQSSLQSLQRDILNEKKKHEVYESQLNELKGELQTE 544
Query: 282 ISQHE---ARCASLAESMREAENKKRQLEEAADALREECARLQAAERVQLAAAEDSQVRG 452
IS E ++ ++LA A +L E+ ++L+ C Q + ++++
Sbjct: 545 ISNSEHLSSQLSTLAAEKEAAVATNNELSESKNSLQTLCNAFQEKLAKSVMQLKENEQNF 604
Query: 453 XXXXXXXXXXXXHSTQLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYEKLKREEA 632
T L + L+ HQ + ++ + QQLQ + +++E+
Sbjct: 605 SSL----------DTSFKKLNESHQELENNHQTITKQLKDTSSKLQQLQLERANFEQKES 654
Query: 633 DKSAXLKELIQSVERREQARADL 701
S +L + + E++ L
Sbjct: 655 TLSDENNDLRTKLLKLEESNKSL 677
Score = 28.3 bits (60), Expect = 1.6
Identities = 33/171 (19%), Positives = 72/171 (42%), Gaps = 14/171 (8%)
Frame = +3
Query: 156 ISKMKSEVKNIVQRCHSLESANIDANQKI---EEYERTLGECRLLISQHEARCASLAESM 326
+ +++ E N Q+ +L N D K+ EE ++L + + + E +L E +
Sbjct: 639 LQQLQLERANFEQKESTLSDENNDLRTKLLKLEESNKSLIKKQEDVDSLEKNIQTLKEDL 698
Query: 327 REAENKKR-------QLEEAADALREECARLQAAERVQLAAAEDSQVRGXXXXXXXXXXX 485
R++E R L E D L+ + L+A ++ D++
Sbjct: 699 RKSEEALRFSKLEAKNLREVIDNLKGKHETLEAQRNDLHSSLSDAKNTNAILSSELTKSS 758
Query: 486 XHSTQLSA----LRDELAALQRQHQDLKDTYQELTLARQQLQDDYEKLKRE 626
+L+A L + A+++ L ++YQ ++ +L+DD+ ++ +
Sbjct: 759 EDVKRLTANVETLTQDSKAMKQSFTSLVNSYQSISNLYHELRDDHVNMQSQ 809
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 498 QLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYEKLKREEADKSAXLKE 656
+L+ + +A Q + DL +T + + DYEK+K + + A L E
Sbjct: 188 KLTNMESNFSAKQSEAYDLSRQLLTVTEKLDKKEKDYEKIKEDVSSIKASLAE 240
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 33.1 bits (72), Expect = 0.055
Identities = 38/196 (19%), Positives = 82/196 (41%), Gaps = 14/196 (7%)
Frame = +3
Query: 156 ISKMKSEVKNIVQRCHSLESANIDANQKIEEYERTLGECRLLISQHEARCASLAESMREA 335
I++++ +K+ L + K+++ E T E + ES+ +
Sbjct: 547 INELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVMNAFQYKDNDLRRFHESINKL 606
Query: 336 ENKKRQLEEAADALREECARLQAAERVQLAAAEDSQVRGXXXXXXXXXXXXHSTQLSALR 515
++++++L + + L+ E V + E ++ ++ + L
Sbjct: 607 QDREKELTSNLEKKNLVISSLR--ETVAMLEKERESIK--KYLSGNAKDLDNTNLMEILN 662
Query: 516 DELAALQRQHQDLKDTY-------QELTLARQQLQDDYEKLKRE----EADKSAXLKELI 662
D+++ LQRQ D+KD +E +A Q+L +E + E E S+ ELI
Sbjct: 663 DKISVLQRQLTDVKDELDVSEEEREEAIVAGQKLSASFELMSNEKQALELKYSSLKNELI 722
Query: 663 QS---VERREQARADL 701
+ ++RRE+ ++L
Sbjct: 723 NAQNLLDRREEELSEL 738
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 31.9 bits (69), Expect = 0.13
Identities = 37/211 (17%), Positives = 80/211 (37%), Gaps = 2/211 (0%)
Frame = +3
Query: 66 LPSEDLELDFKLNVDTVGKLEEEFTVARLHISKMKSEVKNIVQRCHSLESANIDANQKIE 245
LPS + + +D V + EE+ + +++E + + ++ + ES N +
Sbjct: 613 LPSRSIYFSENVEMDLVKRKEEQLNAQLSQLENLQNEERKLQEKVNEHESLLSRTNDILS 672
Query: 246 EYERTLGECRLLISQHEARCASLAESMREAENKKRQLEEAADALREECARLQAAERVQLA 425
+ E LI HE + L E + RQ E+ + E + + +
Sbjct: 673 TLRKERDE--KLIPIHEWQ--QLQERIEHQTLLLRQREKVPEQFAAEIEKNEDIRKENFE 728
Query: 426 AAEDS--QVRGXXXXXXXXXXXXHSTQLSALRDELAALQRQHQDLKDTYQELTLARQQLQ 599
A +S +V+ ++L+ + + L++ D LT + +L+
Sbjct: 729 ALMNSVLKVKENSIKATNNFEKMLGSRLNVIEAKY-KLEKHEMDANQVNARLTEVQDRLK 787
Query: 600 DDYEKLKREEADKSAXLKELIQSVERREQAR 692
D +KL D + ++ S++ + R
Sbjct: 788 DITDKLASAREDAMSLYGSVVDSLQTQSSDR 818
Score = 29.1 bits (62), Expect = 0.89
Identities = 36/184 (19%), Positives = 81/184 (44%), Gaps = 5/184 (2%)
Frame = +3
Query: 72 SEDLELD-FKLNVDTVGKLEEEFTVARLHISKMKSEVKNIVQRCHSLESANIDANQ---K 239
+ED+ + F+ +++V K++E A + KM N+++ + LE +DANQ +
Sbjct: 719 NEDIRKENFEALMNSVLKVKENSIKATNNFEKMLGSRLNVIEAKYKLEKHEMDANQVNAR 778
Query: 240 IEEYERTLGECRLLISQHEARCASLAESMREA-ENKKRQLEEAADALREECARLQAAERV 416
+ E + L + ++ SL S+ ++ + + + A L EE A ++E
Sbjct: 779 LTEVQDRLKDITDKLASAREDAMSLYGSVVDSLQTQSSDRQTAITELNEEFA--TSSEVD 836
Query: 417 QLAAAEDSQVRGXXXXXXXXXXXXHSTQLSALRDELAALQRQHQDLKDTYQELTLARQQL 596
+ E+++++ Q A + E+ L+ + D + +EL +
Sbjct: 837 NKISIEETKLK------FMNVNSYVMEQYDARKKEIEELESKMSDFDQSVEELQDEMNSI 890
Query: 597 QDDY 608
++D+
Sbjct: 891 KEDW 894
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 564 YQELTLARQQLQDDYEKLKREEADKSAXLKELIQSVERREQARADLK 704
Y+E T QL+ D +KLK++ D ++E +++ E+ R+DLK
Sbjct: 235 YREKTNVFNQLRADKKKLKKDLKD---LVEEFQPILDKGEELRSDLK 278
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 31.5 bits (68), Expect = 0.17
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +3
Query: 492 STQLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYEKLKREEADKSAXLKELIQSV 671
+++ + L + +R +L Q L L + +DDYEK+K E K + +
Sbjct: 156 ASENNVLISRIDRTKRHFSELFTQKQMLQLQNENFKDDYEKIKEENKRLYKERKSFLSKI 215
Query: 672 ERREQARADLK 704
E+ DLK
Sbjct: 216 EKSACEIHDLK 226
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 31.1 bits (67), Expect = 0.22
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +3
Query: 492 STQLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYEKLKREE-ADKSAXLKELIQS 668
S QLS +D++ ALQ ++ L + Q A Q L D E+ K+ A S+ +KE I
Sbjct: 139 SEQLSIAKDQIEALQNENSHLGEQVQS---AHQALSDIEERKKQHMFASSSSRVKEEI-L 194
Query: 669 VERREQARADLKGL 710
V+ + +DL L
Sbjct: 195 VQEKSALVSDLASL 208
Score = 27.1 bits (57), Expect = 3.6
Identities = 31/188 (16%), Positives = 76/188 (40%)
Frame = +3
Query: 72 SEDLELDFKLNVDTVGKLEEEFTVARLHISKMKSEVKNIVQRCHSLESANIDANQKIEEY 251
++ L + + N + + +L E+ + ++ + + + + + ++A EEY
Sbjct: 1239 NKSLRENLERNEEVITELREKIETLKTDLANFRLNKEQLESQLQTEKAAVKKLENSNEEY 1298
Query: 252 ERTLGECRLLISQHEARCASLAESMREAENKKRQLEEAADALREECARLQAAERVQLAAA 431
+R E L ++ + + + E +K+ +EE L +E L++ + +
Sbjct: 1299 KRHNQEILLSLNSSTSTSSDASRLKNELVSKENLIEE----LNQEIGHLKSELETVKSKS 1354
Query: 432 EDSQVRGXXXXXXXXXXXXHSTQLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYE 611
ED + +T+L+A A + Q + + ++ RQQL
Sbjct: 1355 EDLENERAQNQSKIEQLELKNTKLAA-----AWRTKYEQVVNKSLEKHNQIRQQLSQKTS 1409
Query: 612 KLKREEAD 635
+L+ + A+
Sbjct: 1410 ELEAKVAE 1417
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 30.3 bits (65), Expect = 0.38
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Frame = +3
Query: 495 TQLSALRDELAALQRQHQDLKDTYQELTLARQQ--------LQDDYEKLKREEADKSAXL 650
TQL L+ + A R Q+++ ELTL +Q L DY++ K + D L
Sbjct: 701 TQLKDLKTQNANFHRLEQEIQLKQHELTLLIEQRETDSSFRLLSDYQQYKDDVKDLKQRL 760
Query: 651 KELIQSVERREQARADLKGLXXTWLRN 731
EL + + + +QA ++ W N
Sbjct: 761 PELDRLILQSDQAIKKIERDMQEWKHN 787
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 29.5 bits (63), Expect = 0.67
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Frame = +3
Query: 75 EDLELDFKLNVDTVGKLEEEFTVARLHISK-------MKSEVKNIVQRC-HSLESANIDA 230
E L+L+ KL + + +E A+L +SK MK ++ + QR +ES +
Sbjct: 486 ELLQLNAKLEKANI--VIDELNSAKLKLSKQVEEESSMKDDLTEMNQRLKEQIESYENEV 543
Query: 231 NQKIEEYERTLGECRLLISQHEARCASLAESMREAENK 344
N +I RTL E L +Q+E +L E ++ A K
Sbjct: 544 NSEITS--RTLKEFETLKTQYEKNLCNLREQLKTARMK 579
>SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 166
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 243 EEYERTLGECRLLISQHEARCASLAESMREAENKKRQLEEAADALREECARL 398
EE ER + L I E R L + E ++RQ EEA +++ RL
Sbjct: 77 EELERLQHQKMLQIQAEEQRKIELQQEQERLEQERRQKEEAIALQKQQQQRL 128
>SPAC222.15 |meu13|SPAC821.01|Tat binding protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/71 (28%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = +3
Query: 504 SALRDELAALQRQHQDLKDTYQELTLARQQLQDDYEKLKREEADKS-AXLKELIQSVERR 680
+A +ELA +++Q Q+LKD E+++ + ++ +L+ S A ++E IQS+++
Sbjct: 83 AATPEELAEMEKQIQELKD---EVSVVKTLYKEKCIELQALNNSLSPAEIREKIQSIDKE 139
Query: 681 -EQARADLKGL 710
E+ + L+ L
Sbjct: 140 IEETSSKLESL 150
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 27.9 bits (59), Expect = 2.1
Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 1/109 (0%)
Frame = +3
Query: 78 DLELDFKLNVDTVGKLEEEFTVARLHISKMKSEVKNIVQRCHSLESANIDANQKIEEYER 257
D E + + + +E+ F+ + ++ E ++ Q + LES ++ K+E
Sbjct: 877 DKEEILRRTQERLANIEDSFSETKQQNENLQRESASLKQINNELESELLEKTSKVETLLS 936
Query: 258 TLGECRLLISQHEARCASLAESMRE-AENKKRQLEEAADALREECARLQ 401
E + +S E + EN L E A+ E+C LQ
Sbjct: 937 EQNELKEKLSLEEKDLLDTKGELESLRENNATVLSEKAE-FNEQCKSLQ 984
>SPAC637.11 |suv3||ATP-dependent RNA helicase
Suv3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +3
Query: 549 DLKDTYQELTLARQQLQDDYEKLKREEADKSAXLKELIQSVERREQARADLK 704
DLK++ + L L++ D +K+K+ + ++ ++ ER E+ R DL+
Sbjct: 100 DLKNSDKSLALSKSSSTFDLQKIKKIHDCLLSEYRKYVRYQERIEETRPDLQ 151
>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 120 KLEEEFTVARLHISKMKSEVKNIVQRCHSLESANIDANQKIEEYERTL 263
KLEEE + + KS+ + RC SL S+N +E +R +
Sbjct: 130 KLEEEMAHLKKKCNVYKSKFEESSLRCKSLYSSNTKLKDSMETMKRRM 177
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +3
Query: 498 QLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYEKLKREEAD 635
++ + RD+ A +R+ Q KD Y +L ++ + + EKL+++ D
Sbjct: 314 EIRSFRDQSAMKKREKQRSKDEY--ASLYKEYTRKEQEKLRKQNDD 357
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 27.1 bits (57), Expect = 3.6
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Frame = +3
Query: 234 QKI-EEYERTLGEC-------RLLISQHEARCASLAESMREAENKKRQLEEAADALREEC 389
QKI EE+ER + + +L I + EA + E +K LEE + LR EC
Sbjct: 138 QKIQEEFERQITDLLEEQQQLKLEIERLEAETERANSETEQYEKQKEALEEEYEELRNEC 197
Query: 390 ARLQAAERVQLAAAEDS 440
+ ++ +D+
Sbjct: 198 LKHDPQLDAEIRTLQDT 214
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 27.1 bits (57), Expect = 3.6
Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Frame = +3
Query: 330 EAENKKR---QLEEAADALREECARLQAAERVQLAAAEDSQVRGXXXXXXXXXXXXHSTQ 500
E E KKR +L++A +ALRE+ + ER+ + + + Q
Sbjct: 34 EEEIKKRSPEELKQAIEALREKAKEKKEKERILALEEKKTNYKILQKSNDETAQAMRKMQ 93
Query: 501 LSA-LRDELAALQRQHQDLKDTYQELTLARQQLQDDYEKLKREEADKSAXLKELIQSVER 677
A LRD LQ+ Q + ++ +++ D ++ E +K++ +KE +++
Sbjct: 94 DQARLRD----LQKIRQQKAEDAEQRKKILAEIERDKKRRAAERENKNSSVKETAAPIKQ 149
Query: 678 REQARA 695
+ A +
Sbjct: 150 PKNANS 155
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = +3
Query: 501 LSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYEKLKREEADKSAXLKELIQSVERR 680
+S + E +++ +DLK QE+ Q+L YE ++R L++ +E +
Sbjct: 8 VSISKSEEIKYRQKCKDLKARIQEIQKGNQELLSKYEVIRRAVKRGRLERAILMEQLELQ 67
Query: 681 EQARA 695
+A++
Sbjct: 68 SEAKS 72
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 26.2 bits (55), Expect = 6.3
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +3
Query: 63 ELPSEDLELDFKLNVDTVGKLEEEFTVARLHISKMKSEVKNIVQRCHSLESANIDANQKI 242
E S DLE DF D EEE + + ++ + E + R L S DA Q
Sbjct: 129 EEDSSDLENDFLYGADEFSSDEEE--MDDISVTSSEEEEEENGARIEELNSDEEDAEQAE 186
Query: 243 EE 248
EE
Sbjct: 187 EE 188
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 26.2 bits (55), Expect = 6.3
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +3
Query: 507 ALRDELAALQRQHQDLKDTYQELTLARQQLQDDYEKLKREEADKSAXLKELIQSVERR 680
AL+ + L + +LK Y++L+ L Y K KR+E K+ +K LI+ +E +
Sbjct: 711 ALKTVVNQLTNELMELKKRYEKLSDRYNSLTPGYHKHKRQEI-KNKLIK-LIECMESK 766
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 6.3
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = +3
Query: 495 TQLSALRDELAALQRQHQDLKDTYQ-ELTLARQQLQDDYEKLKREEAD---KSAXLKE-L 659
T S + DEL + HQ L D Y ++ ++L+ E L++ D K + KE L
Sbjct: 88 TTWSKILDELTRSSKTHQKLSDDYSLDIAEKLKKLESHIEALRKVYDDLYKKFSSEKETL 147
Query: 660 IQSVER 677
+ SV+R
Sbjct: 148 LNSVKR 153
>SPCC364.06 |nap1||nucleosome assembly protein Nap1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 393
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 609 EKLKREEADKSAXLKELIQSVERREQARADLKGLXXTWL 725
E++K+ EA KE S ++++ D KG+ WL
Sbjct: 131 EEIKKGEAADENEKKEPTSSESKKQEGGDDTKGIPEFWL 169
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +3
Query: 501 LSALRDELAALQRQHQDLKD---TYQELTLARQQLQDDYEKLKREEADKSAXLKELIQSV 671
L+ + +++ +L+ + D + TY EL Q+L ++ + ++ + SA E Q
Sbjct: 447 LAKINEKIESLELEKHDQQKKRLTYSELFHKTQELNEELQSCLQKILEASADRNESKQDA 506
Query: 672 ERRE 683
++RE
Sbjct: 507 KKRE 510
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/71 (19%), Positives = 35/71 (49%)
Frame = +3
Query: 498 QLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYEKLKREEADKSAXLKELIQSVER 677
Q S ++ L+++ +DL+ +ELT+ ++ +++ S + ++ E+
Sbjct: 107 QKSQFEKRISILEKEKEDLQRKMEELTVESMEVVRLTRQVETLSTQYSIQRSQWVREDEK 166
Query: 678 REQARADLKGL 710
+++ DLK L
Sbjct: 167 KKKEIQDLKEL 177
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,226,036
Number of Sequences: 5004
Number of extensions: 35109
Number of successful extensions: 212
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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