Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_H12
         (855 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0610 - 7997406-7998047,7998379-7998426,8000719-8001143,800...    35   0.095
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883...    31   1.5  
06_01_0350 + 2534422-2535615                                           31   1.5  
12_02_0407 - 18654134-18654172,18654913-18655803                       30   2.7  
01_06_0971 - 33483015-33483071,33483282-33483315,33483590-334836...    29   3.6  
01_01_0094 - 730484-731570,732030-732715                               28   8.3  

>04_01_0610 -
           7997406-7998047,7998379-7998426,8000719-8001143,
           8002301-8002589
          Length = 467

 Score = 34.7 bits (76), Expect = 0.095
 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = -3

Query: 391 REQLLFTRNPSPRQSSRASLEYLLLPPRSAP--TEAPSGLTPRPFCALHRARP 239
           +E + F +NP     SR  L  LLLPP   P   +AP    PRP+C  H  RP
Sbjct: 369 QEVVDFLKNPD----SRRLLLLLLLPPPGPPPLAQAPPRHPPRPWCRPHTPRP 417


>07_03_1042 +
           23487326-23487443,23487555-23487957,23488057-23488397,
           23488621-23489660
          Length = 633

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 16/58 (27%), Positives = 25/58 (43%)
 Frame = -3

Query: 778 PXXHLHVHPSPEFSRSAESIPTPAANAVLFAFRTISPFYRIPWNSNAQAEKKTLPGPL 605
           P  H H HP P   R  +++P P   A L   R  +      W+  +  + +  PGP+
Sbjct: 490 PHPHPHPHPHPPQGRFMDNVPQPPPPAKL-PHRMFTDNSVQQWHHRSNQQMEMEPGPM 546


>06_01_0350 + 2534422-2535615
          Length = 397

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -3

Query: 655 PWNSNAQAEKKTLPGPLGGVFRP 587
           PW S+A+ E+K LP PL  +F P
Sbjct: 42  PWRSSARLERKLLPPPLPWLFLP 64


>12_02_0407 - 18654134-18654172,18654913-18655803
          Length = 309

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +2

Query: 512 EPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFCLSVRVPWNPIEGRY 676
           E G+G ++++ PS+ +T      P+ P     R     + CLS    ++PI GRY
Sbjct: 115 EEGTGRLTLVNPSTGETLAVPPPPRLPPKRRHRRAPLVVSCLS--FGYHPITGRY 167


>01_06_0971 -
           33483015-33483071,33483282-33483315,33483590-33483684,
           33483769-33483843,33483925-33484010,33484256-33484307,
           33484381-33484455,33484554-33484620,33485699-33486159
          Length = 333

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -3

Query: 379 LFTRNPSPRQSSRASLEYLLLPPRSAPTEAPSGLTPRPF-CALHRARPTRYG 227
           L  R+P+P  + R+ L        S+PT A     P PF  A H   P R G
Sbjct: 10  LLRRSPTPIPNPRSLLSLDAFLAASSPTAASHATAPAPFAAAAHHHVPIRSG 61


>01_01_0094 - 730484-731570,732030-732715
          Length = 590

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 103 LSGFRLPWPPSCCHERPTPFMVSHERFLGALT 8
           + G +LP  P  C + P P +V   RF   LT
Sbjct: 552 VDGLQLPSRPFFCDDEPLPLLVDSYRFSSELT 583


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,132,346
Number of Sequences: 37544
Number of extensions: 604783
Number of successful extensions: 1916
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1916
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)