Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_H12
         (855 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.6  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   6.3  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   6.3  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   8.3  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   8.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   8.3  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 109 CNDSPAEATSPENGW 153
           C D P E   PE+GW
Sbjct: 642 CRDIPEEFLRPESGW 656


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 763 HVHPSPEFSRSAESIPTPAANAVLFAF 683
           H++P+P+       +P   AN   +AF
Sbjct: 452 HIYPNPDVFDPDNFLPEKTANRHYYAF 478


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 615 PDLSAASSGHFGLPRRTLVFK 553
           PDL+  S G  GLP   L  +
Sbjct: 336 PDLAGTSQGSAGLPSAILAMR 356


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 168 AYALPLPARVMLNF 209
           ++ +PLP RV+ NF
Sbjct: 222 SFCIPLPVRVLPNF 235


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1

Query: 684 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 601
           SE   P+   HG R  RQ+ +   D  +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -2

Query: 308 ICTDGGSKRAHAQTLLRSPSRTSYSLRLNDTKLKI*HH 195
           +C    S+       L SP R   + R+N TKLK  HH
Sbjct: 120 LCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKR-HH 156


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,998
Number of Sequences: 438
Number of extensions: 6416
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)