Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_H10
         (842 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0483 - 3799049-3799639,3800017-3800143,3800463-3800881           29   6.1  

>12_01_0483 - 3799049-3799639,3800017-3800143,3800463-3800881
          Length = 378

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 22/78 (28%), Positives = 31/78 (39%)
 Frame = +2

Query: 392 NCEEKMVSLQLFILECNKTQEALSSMLMDLETSELDEKKDDILLTVTDVHIKSEVKDENA 571
           NC +   S +  +  C      + S L D +  E DE +   LL   D H+       N 
Sbjct: 290 NCSQSHTSEENIVPSCGDFAAEMWSGLFDTKEDEEDEAQ--YLLYDMDTHVDMNCIFSNM 347

Query: 572 DYTINTAVPDLLAYQKSE 625
           DY  N   P L +  K+E
Sbjct: 348 DYGSNIE-PGLASVVKAE 364


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,193,586
Number of Sequences: 37544
Number of extensions: 281459
Number of successful extensions: 616
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)