Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_H10
(842 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX248408-3|CAM26258.1| 723|Homo sapiens vacuolar protein sortin... 38 0.060
BC040114-1|AAH40114.2| 723|Homo sapiens vacuolar protein sortin... 38 0.060
BC032108-1|AAH32108.1| 723|Homo sapiens vacuolar protein sortin... 38 0.060
AL844527-16|CAI41847.1| 723|Homo sapiens vacuolar protein sorti... 38 0.060
AL713971-4|CAI17655.1| 723|Homo sapiens vacuolar protein sortin... 38 0.060
AL645940-15|CAI18075.1| 723|Homo sapiens vacuolar protein sorti... 38 0.060
AL031228-4|CAI95618.1| 723|Homo sapiens vacuolar protein sortin... 38 0.060
AK222867-1|BAD96587.1| 723|Homo sapiens suppressor of actin mut... 38 0.060
BC033545-1|AAH33545.1| 700|Homo sapiens cancer antigen 1 protein. 35 0.32
BC026194-1|AAH26194.1| 700|Homo sapiens cancer antigen 1 protein. 35 0.32
AL139095-7|CAI16451.1| 847|Homo sapiens cancer antigen 1 protein. 35 0.32
AL139095-5|CAI16449.1| 545|Homo sapiens cancer antigen 1 protein. 35 0.32
AK097760-1|BAC05162.1| 824|Homo sapiens protein ( Homo sapiens ... 35 0.32
AF414185-1|AAO47239.1| 641|Homo sapiens CAGE-1 protein. 35 0.32
>BX248408-3|CAM26258.1| 723|Homo sapiens vacuolar protein sorting
52 (S. cerevisiae) protein.
Length = 723
Score = 37.5 bits (83), Expect = 0.060
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2
Query: 479 LETSELDEKKDDILLTVTDVHIKSEVKDENADYTINTAVPDLLAYQKSEEL 631
L+ ELD D+ +L DVHI++ ++DE + T V DL Y K EL
Sbjct: 40 LQLGELDITSDEFILDEVDVHIQANLEDELVKEALKTGV-DLRHYSKQVEL 89
>BC040114-1|AAH40114.2| 723|Homo sapiens vacuolar protein sorting
52 homolog (S. cerevisiae) protein.
Length = 723
Score = 37.5 bits (83), Expect = 0.060
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2
Query: 479 LETSELDEKKDDILLTVTDVHIKSEVKDENADYTINTAVPDLLAYQKSEEL 631
L+ ELD D+ +L DVHI++ ++DE + T V DL Y K EL
Sbjct: 40 LQLGELDITSDEFILDEVDVHIQANLEDELVKEALKTGV-DLRHYSKQVEL 89
>BC032108-1|AAH32108.1| 723|Homo sapiens vacuolar protein sorting
52 homolog (S. cerevisiae) protein.
Length = 723
Score = 37.5 bits (83), Expect = 0.060
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2
Query: 479 LETSELDEKKDDILLTVTDVHIKSEVKDENADYTINTAVPDLLAYQKSEEL 631
L+ ELD D+ +L DVHI++ ++DE + T V DL Y K EL
Sbjct: 40 LQLGELDITSDEFILDEVDVHIQANLEDELVKEALKTGV-DLRHYSKQVEL 89
>AL844527-16|CAI41847.1| 723|Homo sapiens vacuolar protein sorting
52 (S. cerevisiae) protein.
Length = 723
Score = 37.5 bits (83), Expect = 0.060
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2
Query: 479 LETSELDEKKDDILLTVTDVHIKSEVKDENADYTINTAVPDLLAYQKSEEL 631
L+ ELD D+ +L DVHI++ ++DE + T V DL Y K EL
Sbjct: 40 LQLGELDITSDEFILDEVDVHIQANLEDELVKEALKTGV-DLRHYSKQVEL 89
>AL713971-4|CAI17655.1| 723|Homo sapiens vacuolar protein sorting
52 (S. cerevisiae) protein.
Length = 723
Score = 37.5 bits (83), Expect = 0.060
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2
Query: 479 LETSELDEKKDDILLTVTDVHIKSEVKDENADYTINTAVPDLLAYQKSEEL 631
L+ ELD D+ +L DVHI++ ++DE + T V DL Y K EL
Sbjct: 40 LQLGELDITSDEFILDEVDVHIQANLEDELVKEALKTGV-DLRHYSKQVEL 89
>AL645940-15|CAI18075.1| 723|Homo sapiens vacuolar protein sorting
52 (S. cerevisiae) protein.
Length = 723
Score = 37.5 bits (83), Expect = 0.060
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2
Query: 479 LETSELDEKKDDILLTVTDVHIKSEVKDENADYTINTAVPDLLAYQKSEEL 631
L+ ELD D+ +L DVHI++ ++DE + T V DL Y K EL
Sbjct: 40 LQLGELDITSDEFILDEVDVHIQANLEDELVKEALKTGV-DLRHYSKQVEL 89
>AL031228-4|CAI95618.1| 723|Homo sapiens vacuolar protein sorting
52 (yeast) protein.
Length = 723
Score = 37.5 bits (83), Expect = 0.060
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2
Query: 479 LETSELDEKKDDILLTVTDVHIKSEVKDENADYTINTAVPDLLAYQKSEEL 631
L+ ELD D+ +L DVHI++ ++DE + T V DL Y K EL
Sbjct: 40 LQLGELDITSDEFILDEVDVHIQANLEDELVKEALKTGV-DLRHYSKQVEL 89
>AK222867-1|BAD96587.1| 723|Homo sapiens suppressor of actin
mutations 2-like isoform a variant protein.
Length = 723
Score = 37.5 bits (83), Expect = 0.060
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2
Query: 479 LETSELDEKKDDILLTVTDVHIKSEVKDENADYTINTAVPDLLAYQKSEEL 631
L+ ELD D+ +L DVHI++ ++DE + T V DL Y K EL
Sbjct: 40 LQLGELDITSDEFILDEVDVHIQANLEDELVKEALKTGV-DLRHYSKQVEL 89
>BC033545-1|AAH33545.1| 700|Homo sapiens cancer antigen 1 protein.
Length = 700
Score = 35.1 bits (77), Expect = 0.32
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +2
Query: 242 IKDLCRLCATQDEFSKDLLDESNRNVLNLIEDFLRIIICENDTLPTKICLNCEEKMVSLQ 421
+K+L ++ T+ + D++++ NV LIED +II+ +NDT K N EE + + Q
Sbjct: 337 VKEL-QMKITKQQVFIDVINKLKENVEELIEDKYKIILEKNDT--KKTLQNLEEVLANTQ 393
Query: 422 LFILECNKTQEAL 460
+ E +E L
Sbjct: 394 KHLQESRNDKEML 406
>BC026194-1|AAH26194.1| 700|Homo sapiens cancer antigen 1 protein.
Length = 700
Score = 35.1 bits (77), Expect = 0.32
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +2
Query: 242 IKDLCRLCATQDEFSKDLLDESNRNVLNLIEDFLRIIICENDTLPTKICLNCEEKMVSLQ 421
+K+L ++ T+ + D++++ NV LIED +II+ +NDT K N EE + + Q
Sbjct: 337 VKEL-QMKITKQQVFIDVINKLKENVEELIEDKYKIILEKNDT--KKTLQNLEEVLANTQ 393
Query: 422 LFILECNKTQEAL 460
+ E +E L
Sbjct: 394 KHLQESRNDKEML 406
>AL139095-7|CAI16451.1| 847|Homo sapiens cancer antigen 1 protein.
Length = 847
Score = 35.1 bits (77), Expect = 0.32
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +2
Query: 242 IKDLCRLCATQDEFSKDLLDESNRNVLNLIEDFLRIIICENDTLPTKICLNCEEKMVSLQ 421
+K+L ++ T+ + D++++ NV LIED +II+ +NDT K N EE + + Q
Sbjct: 367 VKEL-QMKITKQQVFIDVINKLKENVEELIEDKYKIILEKNDT--KKTLQNLEEVLANTQ 423
Query: 422 LFILECNKTQEAL 460
+ E +E L
Sbjct: 424 KHLQESRNDKEML 436
>AL139095-5|CAI16449.1| 545|Homo sapiens cancer antigen 1 protein.
Length = 545
Score = 35.1 bits (77), Expect = 0.32
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +2
Query: 242 IKDLCRLCATQDEFSKDLLDESNRNVLNLIEDFLRIIICENDTLPTKICLNCEEKMVSLQ 421
+K+L ++ T+ + D++++ NV LIED +II+ +NDT K N EE + + Q
Sbjct: 65 VKEL-QMKITKQQVFIDVINKLKENVEELIEDKYKIILEKNDT--KKTLQNLEEVLANTQ 121
Query: 422 LFILECNKTQEAL 460
+ E +E L
Sbjct: 122 KHLQESRNDKEML 134
>AK097760-1|BAC05162.1| 824|Homo sapiens protein ( Homo sapiens
cDNA FLJ40441 fis, clone TESTI2040094. ).
Length = 824
Score = 35.1 bits (77), Expect = 0.32
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +2
Query: 242 IKDLCRLCATQDEFSKDLLDESNRNVLNLIEDFLRIIICENDTLPTKICLNCEEKMVSLQ 421
+K+L ++ T+ + D++++ NV LIED +II+ +NDT K N EE + + Q
Sbjct: 337 VKEL-QMKITKQQVFIDVINKLKENVEELIEDKYKIILEKNDT--KKTLQNLEEVLANTQ 393
Query: 422 LFILECNKTQEAL 460
+ E +E L
Sbjct: 394 KHLQESRNDKEML 406
>AF414185-1|AAO47239.1| 641|Homo sapiens CAGE-1 protein.
Length = 641
Score = 35.1 bits (77), Expect = 0.32
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +2
Query: 242 IKDLCRLCATQDEFSKDLLDESNRNVLNLIEDFLRIIICENDTLPTKICLNCEEKMVSLQ 421
+K+L ++ T+ + D++++ NV LIED +II+ +NDT K N EE + + Q
Sbjct: 201 VKEL-QMKITKQQVFIDVINKLKENVEELIEDKYKIILEKNDT--KKTLQNLEEVLANTQ 257
Query: 422 LFILECNKTQEAL 460
+ E +E L
Sbjct: 258 KHLQESRNDKEML 270
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,051,160
Number of Sequences: 237096
Number of extensions: 1746650
Number of successful extensions: 6961
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6961
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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