Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_H10
         (842 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41992-6|AAA83357.1|  270|Caenorhabditis elegans Hypothetical pr...    33   0.25 
Z81491-1|CAB04019.1|  181|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z49909-4|CAA90108.1|  876|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AY303577-1|AAP57299.1|  876|Caenorhabditis elegans cell death-re...    30   1.8  
Z81146-4|CAB03525.1|  501|Caenorhabditis elegans Hypothetical pr...    28   9.5  
U00055-4|AAA50720.2|  431|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>U41992-6|AAA83357.1|  270|Caenorhabditis elegans Hypothetical
           protein F32E10.2 protein.
          Length = 270

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = +2

Query: 434 ECNKTQEALSSMLMDLETSELDEKKDDILLTVTDVHIKSEVKDENADYTINTA 592
           E N  +++    + DLE   LD++K+D++  V ++    +  DE  +  + TA
Sbjct: 202 ETNLVEKSKKKAIPDLENHTLDQEKNDVIERVEEIQEDEDDDDEQREEVVTTA 254


>Z81491-1|CAB04019.1|  181|Caenorhabditis elegans Hypothetical
           protein D1086.1 protein.
          Length = 181

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +2

Query: 470 LMDLETSELDEKKDDILLTVTDVHIKSEVKDENADYTINTAVPDLLAYQKSEELC 634
           L   E S LD  KDD+ LTVT     +++ DE     +N+  P +    K    C
Sbjct: 16  LSKAENSPLDCSKDDLQLTVTCRPKLAKLTDEMKKNPLNSGFPSVETLNKMSGYC 70


>Z49909-4|CAA90108.1|  876|Caenorhabditis elegans Hypothetical
           protein C14A4.4a protein.
          Length = 876

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
 Frame = +2

Query: 335 DFLRIIICENDTLPTKICLNCEEKMVSLQLFILECNKTQEALSSML---MDLETSELDEK 505
           D L+II+   D    K+ L+ +E+  + +   +  N T + ++S+L   +D   +  DE+
Sbjct: 554 DILKIIVEARDVKLEKVGLSAKERNDAQEARGV-MNDTMDHITSVLKSKIDFSHTRFDEE 612

Query: 506 KDDILLTVTDVHIKSEVKD 562
           + +I +  TD  +  E+KD
Sbjct: 613 RGEIYIDKTDEGMDIELKD 631


>AY303577-1|AAP57299.1|  876|Caenorhabditis elegans cell
           death-related nuclease 3 protein.
          Length = 876

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
 Frame = +2

Query: 335 DFLRIIICENDTLPTKICLNCEEKMVSLQLFILECNKTQEALSSML---MDLETSELDEK 505
           D L+II+   D    K+ L+ +E+  + +   +  N T + ++S+L   +D   +  DE+
Sbjct: 554 DILKIIVEARDVKLEKVGLSAKERNDAQEARGV-MNDTMDHITSVLKSKIDFSHTRFDEE 612

Query: 506 KDDILLTVTDVHIKSEVKD 562
           + +I +  TD  +  E+KD
Sbjct: 613 RGEIYIDKTDEGMDIELKD 631


>Z81146-4|CAB03525.1|  501|Caenorhabditis elegans Hypothetical
           protein K10D11.6 protein.
          Length = 501

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +2

Query: 425 FILECNKTQEALSSMLMDLETSELDEKKDDILLTVTDVHIKSEV 556
           FI+E  K Q A  +M+ D+         DD +LT+TD + KSE+
Sbjct: 66  FIVEIPKLQYAYFTMMADIN--------DDSMLTITDCNGKSEI 101


>U00055-4|AAA50720.2|  431|Caenorhabditis elegans Hypothetical
           protein R02F2.4 protein.
          Length = 431

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 596 PDLLAYQKSEELCDYQSNDISCG 664
           P+ L Y K+ E CD++ N   CG
Sbjct: 56  PEDLVYHKNLEFCDWRHNVFECG 78


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,680,796
Number of Sequences: 27780
Number of extensions: 308946
Number of successful extensions: 704
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)