Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_H09
(855 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC902.05c |idh2|glu2|isocitrate dehydrogenase |Schizosaccharom... 241 7e-65
SPAC11G7.03 |idh1|glu3|isocitrate dehydrogenase |Schizosaccharom... 186 3e-48
SPAC31G5.04 |||homoisocitrate dehydrogenase|Schizosaccharomyces ... 101 1e-22
SPBC1A4.02c |leu1|SPBC1E8.07c|3-isopropylmalate dehydrogenase Le... 44 2e-05
SPAC6G10.08 |idp1||isocitrate dehydrogenase Idp1|Schizosaccharom... 36 0.007
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 30 0.36
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 28 1.5
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 28 1.5
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 2.6
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.6
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 3.4
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 27 3.4
SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces pomb... 27 4.5
SPAC23D3.08 |usp108||U1 snRNP-associated protein Usp108|Schizosa... 26 7.8
SPBC16A3.12c |||triglyceride lipase-cholesterol esterase |Schizo... 26 7.8
>SPBC902.05c |idh2|glu2|isocitrate dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 241 bits (591), Expect = 7e-65
Identities = 114/189 (60%), Positives = 139/189 (73%)
Frame = +2
Query: 8 EAAKVPIEWEEVDVTAVRGPDGKFGIPQKAIDTVNANKIGLKGPLMTPVGKGYRSLNLAL 187
+AAKVPIEWE V V + +G IP A ++V NK+ LKGPL TP+GKG+ S+NL L
Sbjct: 69 KAAKVPIEWERVKVYPIL-KNGTTTIPDDAKESVRKNKVALKGPLATPIGKGHVSMNLTL 127
Query: 188 RKEFDLYANVRPCKSLEGIKTLYDNVDVVTIRENTEGEYSGIEHEIVDGVVQSIKLITEE 367
R+ F L+ANVRPC S+ G KT YDNV+ V IRENTEGEYSGIEHE++ GVVQSIKLIT
Sbjct: 128 RRTFGLFANVRPCVSITGYKTPYDNVNTVLIRENTEGEYSGIEHEVIPGVVQSIKLITRA 187
Query: 368 ASTRVAEFAFQFARENKRKKVTAVHKANIMRMSDGLFLRCCRELATKYPDIKFEERYLDT 547
AS RV +AFQ+AR+ + +T VHKA IMRM+DGLFL C +ELA +YPDI+ E LD
Sbjct: 188 ASERVIRYAFQYARQTGKNNITVVHKATIMRMADGLFLECAKELAPEYPDIELREEILDN 247
Query: 548 VCLNMVQDP 574
CL +V DP
Sbjct: 248 ACLKIVTDP 256
Score = 76.2 bits (179), Expect = 6e-15
Identities = 33/49 (67%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Frame = +1
Query: 571 PLP-SLTCWXMPNLYGDIMSDMCSGLVGGLGLTPSGNIGKNGALFESVH 714
P+P + T MPNLYGDI+SDMC+GL+GGLGLTPSGNIG ++FE+VH
Sbjct: 256 PVPYNNTVMVMPNLYGDIVSDMCAGLIGGLGLTPSGNIGNQASIFEAVH 304
>SPAC11G7.03 |idh1|glu3|isocitrate dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 186 bits (454), Expect = 3e-48
Identities = 95/193 (49%), Positives = 130/193 (67%), Gaps = 2/193 (1%)
Frame = +2
Query: 8 EAAKVPIEWEEVDVTAVRGPDGKFGIP-QKAIDTVNANKIGLKGPLMTPVGKG-YRSLNL 181
+ A VPIE+EE+DVT + + G +AI ++ NK+GLKG L TP KG + S N+
Sbjct: 44 KTANVPIEFEEIDVTGMEKNNKSSGDALHEAIQSLKRNKVGLKGILFTPFEKGGHTSFNV 103
Query: 182 ALRKEFDLYANVRPCKSLEGIKTLYDNVDVVTIRENTEGEYSGIEHEIVDGVVQSIKLIT 361
ALRKE D+YA++ K++ G KT +DNVD IRENTEGEYSG+EH+ V GVV+S+K+IT
Sbjct: 104 ALRKELDIYASLVLIKNIPGFKTRHDNVDFAIIRENTEGEYSGLEHQSVPGVVESLKIIT 163
Query: 362 EEASTRVAEFAFQFARENKRKKVTAVHKANIMRMSDGLFLRCCRELATKYPDIKFEERYL 541
E S R+A+FAF FA +N RK VT +HKANIM+++DGLF R ++A Y I ++ +
Sbjct: 164 EYKSKRIAQFAFDFALQNGRKSVTCIHKANIMKLADGLFRRTFYDVANGYDAITPKDLIV 223
Query: 542 DTVCLNMVQDPFQ 580
D + V P Q
Sbjct: 224 DNASMQAVSRPQQ 236
Score = 48.0 bits (109), Expect = 2e-06
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 598 MPNLYGDIMSDMCSGLVGGLGLTPSGNIGKNGALFE 705
MPNLYG I+S++ S LVGG G+ P N G++ ALFE
Sbjct: 242 MPNLYGSILSNIGSALVGGPGVIPGANFGRDYALFE 277
>SPAC31G5.04 |||homoisocitrate dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 362
Score = 101 bits (242), Expect = 1e-22
Identities = 70/211 (33%), Positives = 116/211 (54%), Gaps = 24/211 (11%)
Frame = +2
Query: 14 AKVPIEWEEVDVTAVRGPDGKFG--IPQKAIDTVNAN-KIGLKGPLMTPVGK--GYRSLN 178
AK ++++ +D+ A G + G +P++ ++ + L G + +P K GY S
Sbjct: 34 AKHKLKFDFIDLDAGWGTFERTGKALPERTVERLKTECNAALFGAVQSPTHKVAGYSSPI 93
Query: 179 LALRKEFDLYANVRPCKSLEGIKTLYDNVDVVTIRENTEGEYSGIEHEIVD----GVVQS 346
+ALRK+ LYANVRP KSL+G K VD+V +RENTE Y E + + V ++
Sbjct: 94 VALRKKMGLYANVRPVKSLDGAKG--KPVDLVIVRENTECLYVKEERMVQNTPGKRVAEA 151
Query: 347 IKLITEEASTRVAEFAFQFARE------------NKRKKVTAVHKANIMRMSDGLFLRCC 490
I+ I+EEAST++ + AF+ A+ +K+ VT +HK+N+M ++DGLF C
Sbjct: 152 IRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRESC 211
Query: 491 R---ELATKYPDIKFEERYLDTVCLNMVQDP 574
R L Y I +E+ +D++ + ++P
Sbjct: 212 RHAQSLDPSYASINVDEQIVDSMVYRLFREP 242
Score = 52.8 bits (121), Expect = 6e-08
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = +1
Query: 601 PNLYGDIMSDMCSGLVGGLGLTPSGNIGKNGALFESVH 714
PNLYGDI+SD + L+G LGL PS N+G N + E VH
Sbjct: 251 PNLYGDILSDGAASLIGSLGLVPSANVGDNFVMSEPVH 288
>SPBC1A4.02c |leu1|SPBC1E8.07c|3-isopropylmalate dehydrogenase
Leu1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 371
Score = 44.4 bits (100), Expect = 2e-05
Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Frame = +2
Query: 179 LALRKEFDLYANVRPC----KSLEGIKTL----YDNVDVVTIRENTEGEYSGIEHE-IVD 331
L LRK ++AN+RPC KSL L + VD +RE T G Y G E
Sbjct: 93 LKLRKSMGVWANLRPCNFASKSLVKYSPLKPEIVEGVDFCVVRELTGGCYFGERTEDNGS 152
Query: 332 GVVQSIKLITEEASTRVAEFAFQFAR-ENKRKKVTAVHKANIMRMSDGLFLRCCRELATK 508
G + E +R+A A A N VT + KAN++ S + +
Sbjct: 153 GYAMDTWPYSLEEVSRIARLAAWLAETSNPPAPVTLLDKANVLATSRLWRKTVAKIFKEE 212
Query: 509 YPDIKFEERYLDTVCLNMVQDP 574
YP + + + +D+ + +V+ P
Sbjct: 213 YPHLTLKNQLIDSAAMLLVKSP 234
Score = 35.9 bits (79), Expect = 0.007
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 604 NLYGDIMSDMCSGLVGGLGLTPSGNI-GKNGALFESVH 714
NL+GDI+SD S + G LGL PS ++ G G E VH
Sbjct: 245 NLFGDIISDEASVIPGSLGLLPSASLSGVVGKSEEKVH 282
>SPAC6G10.08 |idp1||isocitrate dehydrogenase
Idp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 418
Score = 35.9 bits (79), Expect = 0.007
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +1
Query: 592 WXMPNLYGDIMSDMCSGLVGGLGLTPSGNIGKNGALFES 708
W N GD+MSD+ + G LGL S I NG FES
Sbjct: 277 WACKNYDGDVMSDVVAQAYGSLGLMTSVLIHPNGRTFES 315
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 30.3 bits (65), Expect = 0.36
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 6/190 (3%)
Frame = -1
Query: 570 SCTMLRQTVSRYRSSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVTFFLLFSLANWKA 391
S T L + SS L S + SS P +L T +T + +
Sbjct: 686 SSTALNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPIT 745
Query: 390 NSATLVLASSVIS--LMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQ 223
+S+ L ++ + S +++ +TP T S + +P S +V TST S SVL S +
Sbjct: 746 SSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPIT 805
Query: 222 GLTLAYKSNSFLRAK-LSDL*PLPTGVXRGPFKPILLAFTVSIAF*GIPNLPSGPLTAVT 46
T+ S + L+ P+ + PI + V+ + P S L + T
Sbjct: 806 SSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSS---TPITSSSVLNSST 862
Query: 45 S-TSSHSIGT 19
TSS ++ T
Sbjct: 863 PITSSTALNT 872
Score = 30.3 bits (65), Expect = 0.36
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 5/129 (3%)
Frame = -1
Query: 570 SCTMLRQTVSRYRSSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVTFFLLFSLANWKA 391
S T L + S SS L S + SS P +L T +T + + +
Sbjct: 2642 SSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTST-PI 2700
Query: 390 NSATLVLASSVIS---LMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLL 226
S+T+V +S+ I+ ++ +TP T S + +P S +V TST S SVL S +
Sbjct: 2701 TSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPI 2760
Query: 225 QGLTLAYKS 199
T+ S
Sbjct: 2761 TSSTVVNTS 2769
Score = 29.5 bits (63), Expect = 0.64
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 4/128 (3%)
Frame = -1
Query: 570 SCTMLRQTVSRYRSSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVTFFLLFSLANWKA 391
S T L + SS L S + SS P +L T +T + +
Sbjct: 3158 SSTTLNTSTPITSSSVLNSSTAITSSSIVNSSTPITSSSVLNSSTPITSSTTLNTSTPIT 3217
Query: 390 NSATLVLASSVIS--LMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQ 223
+S+ L ++++ S +++ +TP T S + +P S +V TST S SVL S +
Sbjct: 3218 SSSVLNSSTAITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPIT 3277
Query: 222 GLTLAYKS 199
T+ S
Sbjct: 3278 SSTVVNTS 3285
Score = 29.1 bits (62), Expect = 0.84
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 6/184 (3%)
Frame = -1
Query: 570 SCTMLRQTVSRYRSSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVTFFLLFSLANWKA 391
S T++ + SS L S + SS P +L T +T + + +
Sbjct: 2450 SSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTST-PI 2508
Query: 390 NSATLVLASSVIS---LMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLL 226
S+T+V +S+ I+ +++ +TP T S + +P S +V TST S +V+ S +
Sbjct: 2509 TSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPI 2568
Query: 225 QGLTLAYKSNSFLRAK-LSDL*PLPTGVXRGPFKPILLAFTVSIAF*GIPNLPSGPLTAV 49
LT S + L+ P+ + PI + V+ + + T +
Sbjct: 2569 TSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPI 2628
Query: 48 TSTS 37
TS+S
Sbjct: 2629 TSSS 2632
Score = 29.1 bits (62), Expect = 0.84
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = -1
Query: 570 SCTMLRQTVSRYRSSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVTFFLLFSLANWKA 391
S T+L + SS L S + SS P +L T +T + +
Sbjct: 2822 SSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTSIT 2881
Query: 390 NSATLVLASSVIS--LMDCTTPSTISCSIPEYSPSVFSLIVTTST 262
+S+ L ++ + S +++ +TP T S + +P S +V TST
Sbjct: 2882 SSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTST 2926
Score = 29.1 bits (62), Expect = 0.84
Identities = 37/126 (29%), Positives = 52/126 (41%), Gaps = 2/126 (1%)
Frame = -1
Query: 570 SCTMLRQTVSRYRSSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVTFFLLFSLANWKA 391
S T L + SS L S + SS P +L TA+T +
Sbjct: 3302 SSTTLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTAITSSSIL------- 3354
Query: 390 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 217
NS+T V +SSV++ +TP T S + +P S + TST S SVL S +
Sbjct: 3355 NSSTPVTSSSVLN---SSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSS 3411
Query: 216 TLAYKS 199
T+ S
Sbjct: 3412 TVVNSS 3417
Score = 28.7 bits (61), Expect = 1.1
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 5/129 (3%)
Frame = -1
Query: 570 SCTMLRQTVSRYRSSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVTFFLLFSLANWKA 391
S T+L + SS L S + SS P ++ T +T + + +
Sbjct: 2234 SSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTST-PI 2292
Query: 390 NSATLVLASSVIS---LMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLL 226
S+T+V +S+ I+ ++ +TP T S + +P S +V TST S SVL S +
Sbjct: 2293 TSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPI 2352
Query: 225 QGLTLAYKS 199
T+ S
Sbjct: 2353 TSSTVVNTS 2361
Score = 28.3 bits (60), Expect = 1.5
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -1
Query: 390 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 217
NS+T + +S+V++ +TP T S + +P S +V TST YSVL S +
Sbjct: 547 NSSTPITSSTVVNT---STPITSSSVLNSSTPITSSTVVNTSTPITRYSVLNSSTPITSS 603
Query: 216 TLAYKS 199
T+ S
Sbjct: 604 TVLNSS 609
Score = 28.3 bits (60), Expect = 1.5
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = -1
Query: 570 SCTMLRQTVSRYRSSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVTFFLLFSLANWKA 391
S T+L + SS L S + SS P ++ T +T + + +
Sbjct: 1394 SSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPIT 1453
Query: 390 NSATLVLASSVIS--LMDCTTPSTISCSIPEYSPSVFSLIVTTST 262
+S+ L ++ + S +++ +TP T S + +P S +V TST
Sbjct: 1454 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTST 1498
Score = 27.9 bits (59), Expect = 1.9
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Frame = -1
Query: 570 SCTMLRQTVSRYRSSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVTFFLLFSLANWKA 391
S T+L + SS L S + SS P L T +T + + ++
Sbjct: 1094 SSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTPITSSSVLN-SSTPI 1152
Query: 390 NSATLVLASSVIS---LMDCTTPSTISCSIPEYSPSVFSLIVTTST 262
S+T+V S+ I+ +++ +TP T S + +P S +V TST
Sbjct: 1153 TSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTST 1198
Score = 27.9 bits (59), Expect = 1.9
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Frame = -1
Query: 570 SCTMLRQTVSRYRSSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVTFFLLFSLANWKA 391
S T++ + S+ L + + SS P L T++T + + ++
Sbjct: 1262 SSTVVNSSTPITSSTALNTSIPITSSSVLNSSTPITSSTALNTSTSITSSSVLN-SSTPI 1320
Query: 390 NSATLVLASSVI---SLMDCTTPSTISCSIPEYSPSVFSLIVTTST 262
S+T+V S+ I S+++ +TP T S + +P S +V TST
Sbjct: 1321 TSSTVVNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTST 1366
Score = 27.9 bits (59), Expect = 1.9
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Frame = -1
Query: 570 SCTMLRQTVSRYRSSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVTFFLLFSLANWKA 391
S T L + SS L S + SS P ++ T +T + + +
Sbjct: 2162 SSTALNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTST-PI 2220
Query: 390 NSATLVLASSVIS---LMDCTTPSTISCSIPEYSPSVFSLIVTTST 262
S+T+V +S+ I+ +++ +TP T S + +P S +V TST
Sbjct: 2221 TSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTST 2266
Score = 27.9 bits (59), Expect = 1.9
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = -1
Query: 531 SSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVTFFLLFSLANWKANSATLVLASSVIS 352
SS L S + SS P +L TA+T + + + +S+ L ++ + S
Sbjct: 3195 SSVLNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSSVLNSSTPITSSSVLNSSTPITS 3254
Query: 351 --LMDCTTPSTISCSIPEYSPSVFSLIVTTST 262
+++ +TP T S + +P S +V TST
Sbjct: 3255 STVVNTSTPITSSSVLNSSTPITSSTVVNTST 3286
Score = 27.5 bits (58), Expect = 2.6
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Frame = -1
Query: 570 SCTMLRQTVSRYRSSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVTFFLLFSLANWKA 391
S T++ + SS L S + SS P ++ T +T + + +
Sbjct: 1322 SSTVVNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTST-PI 1380
Query: 390 NSATLVLASSVIS---LMDCTTPSTISCSIPEYSPSVFSLIVTTST 262
S+T+V +S+ I+ +++ +TP T S + +P S +V TST
Sbjct: 1381 TSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTST 1426
Score = 27.1 bits (57), Expect = 3.4
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -1
Query: 390 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 217
NS+T + +S+V++ +TP T S + +P S +V TST S SVL S +
Sbjct: 1411 NSSTPITSSTVVNT---STPITSSTVVNSSTPITSSTVVNTSTPITSSSVLNSSTPITSS 1467
Query: 216 TLAYKS 199
T+ S
Sbjct: 1468 TVVNTS 1473
Score = 27.1 bits (57), Expect = 3.4
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = -1
Query: 570 SCTMLRQTVSRYRSSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVTFFLLFSLANWKA 391
S ++L + SS L S + SS P +L T +T + +
Sbjct: 1922 SSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPIT 1981
Query: 390 NSATLVLASSVIS--LMDCTTPSTISCSIPEYSPSVFSLIVTTST 262
+S+ L ++ + S +++ +TP T S + +P S +V TST
Sbjct: 1982 SSSVLNSSTPITSSSVLNTSTPITSSSVLNSSTPITSSTVVNTST 2026
Score = 27.1 bits (57), Expect = 3.4
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Frame = -1
Query: 570 SCTMLRQTVSRYRSSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVTFFLLFSLANWKA 391
S T L + SS L S + SS P ++ T +T + + +
Sbjct: 2102 SSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPIT 2161
Query: 390 NSATLVLASSVIS--LMDCTTPSTISCSIPEYSPSVFSLIVTTST 262
+S L ++ + S +++ +TP T S + +P S +V TST
Sbjct: 2162 SSTALNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTST 2206
Score = 27.1 bits (57), Expect = 3.4
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 2/126 (1%)
Frame = -1
Query: 570 SCTMLRQTVSRYRSSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVTFFLLFSLANWKA 391
S T L + SS L S + SS P +L TA+T +
Sbjct: 3074 SSTALNTSTPITSSSVLNSSTAITSSSIVNSSTPITSSSVLNSSTAITSSSIL------- 3126
Query: 390 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 217
NS+T + +SS+++ +TP T S + +P S + TST S SVL S +
Sbjct: 3127 NSSTPITSSSILN---SSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSS 3183
Query: 216 TLAYKS 199
++ S
Sbjct: 3184 SIVNSS 3189
Score = 26.6 bits (56), Expect = 4.5
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = -1
Query: 570 SCTMLRQTVSRYRSSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVTFFLLFSLANWKA 391
S ++L + SS L + + SS P IL T +T + + +
Sbjct: 386 SSSVLNSSTPITSSSILNTSTPITSSSVLNSSTPITSSSILNSSTPITSSTVLNSSTPIT 445
Query: 390 NSATLVLASSVIS--LMDCTTPSTISCSIPEYSPSVFSLIVTTST 262
+S L ++ + S +++ +TP T S + +P S +V TST
Sbjct: 446 SSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTST 490
Score = 26.6 bits (56), Expect = 4.5
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Frame = -1
Query: 570 SCTMLRQTVSRYRSSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVTFFLLFSLANWKA 391
S T L + SS L S + SS P ++ T +T + +
Sbjct: 1022 SSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPIT 1081
Query: 390 NSATLVLASSVIS--LMDCTTPSTISCSIPEYSPSVFSLIVTTST 262
+S+ L ++ + S +++ +TP T S + +P S +V TST
Sbjct: 1082 SSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTST 1126
Score = 25.8 bits (54), Expect = 7.8
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -1
Query: 390 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 262
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 2323 NSSTPITSSTVVNT---STPITSSSVLNSSTPITSSTVVNTST 2362
Score = 25.8 bits (54), Expect = 7.8
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -1
Query: 390 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 262
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 2383 NSSTPITSSTVVNT---STPITSSSVLNSSTPITSSTVVNTST 2422
Score = 25.8 bits (54), Expect = 7.8
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -1
Query: 390 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 262
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 2731 NSSTPITSSTVVNT---STPITSSSVLNSSTPITSSTVVNTST 2770
Score = 25.8 bits (54), Expect = 7.8
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -1
Query: 390 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 262
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 2983 NSSTPITSSTVVNT---STPITSSSVLNSSTPITSSTVVNTST 3022
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 28.3 bits (60), Expect = 1.5
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Frame = -1
Query: 633 HVRHDVTVQVGHXPARQTWKGSCTML---RQTVSRYRSSNLMSGYLVASSRQQRRKRPSD 463
H+ V V + W G+CT + + + + SN+ + +V S Q +
Sbjct: 945 HLVKSVCVNNSADTSTNLWLGTCTDIHDHKMLEEKLQESNIEAQRIVRSKMQYLSNMSHE 1004
Query: 462 IRIILALCTAVTFFLLFSLANWKANSATLVLASSVISLM 346
IR L T + FLL + + + S ++ S SL+
Sbjct: 1005 IRTPLIGITGMVSFLLETQMSAEQLSYARIIQQSAKSLL 1043
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 28.3 bits (60), Expect = 1.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 463 HTHNISFVYGRDLLPLVFSGELEGELR 383
HT+N+SF + P++ SG +G ++
Sbjct: 227 HTNNVSFAFFHSKFPIIISGSEDGTVK 253
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 728 GAPXPCTDSKSAPFLPMLPEGVRPSPPTSP 639
GAP SAP P LP G+ +PP P
Sbjct: 442 GAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -2
Query: 725 APXPCTDSKSAPFLPMLPEGVRPSPPTSP 639
AP P +SAP LP L R S P P
Sbjct: 390 APPPAIPGRSAPALPPLGNASRTSTPPVP 418
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.5 bits (58), Expect = 2.6
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
Frame = -1
Query: 390 NSATLVLASSVISLM----------DCTTPSTISCSIPEYSPSVFSLIVTTSTLSYSVLI 241
NS+TL+ ASS +L+ TT S IS ++P + S S + +STL+ S+ +
Sbjct: 737 NSSTLITASSSNTLLSSITSSSAIVSSTTVSNISSNLPSATASSQSQLTNSSTLATSLYL 796
Query: 240 PS 235
S
Sbjct: 797 SS 798
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 27.1 bits (57), Expect = 3.4
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = -1
Query: 393 ANSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTSTLSYSVLIPS 235
++S++ ++ASS S M ++ S S S+P S S S +TTS LS S I S
Sbjct: 124 SSSSSSLVASSSSSGMSSSSLSH-SSSVPSSSSSYHSSSMTTSGLSSSASIVS 175
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = -3
Query: 394 GELRHSRTGLLRDQLDGLHDPVDDLVLDTGILTLGVLSDRDHINVV 257
GEL + + ++G HD + ++D+ + +++D DH+N+V
Sbjct: 848 GELIAVKQVEIPQTINGRHDQLRKDIVDSINAEISMIADLDHLNIV 893
>SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -1
Query: 312 IPEYSPSVFSLIVTTSTLSYSVLIPSKLLQGLTLAYKSNSFLRAKLSDL*PLPTG 148
IPEYS + + T+ +++ P+K + G + +N +L K++ LPTG
Sbjct: 516 IPEYSKLNVTAVNLTNHSYWNLASPNKTIDGTIIKSTTNVYL--KVNSETSLPTG 568
>SPAC23D3.08 |usp108||U1 snRNP-associated protein
Usp108|Schizosaccharomyces pombe|chr 1|||Manual
Length = 382
Score = 25.8 bits (54), Expect = 7.8
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -1
Query: 372 LASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTSTLSYSVLIPS 235
LASS+ +L+ TP+ + + +V SLI+ + L + LIPS
Sbjct: 88 LASSIPALIKVVTPTKEEDASLNINLAVSSLILGSKVLIHQNLIPS 133
>SPBC16A3.12c |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 443
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = -3
Query: 523 LDVRVLGGELATTAQEEAV*HTHNISFVYGRDLLPLVFSGELEGELRHS 377
+++ V+ L A+E ++ H ++ F++G+D+ VF ++ HS
Sbjct: 381 INMEVMRTALPPHAKEVSIAHYEHLDFLWGQDVKEEVFPVVIDALKHHS 429
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,011,196
Number of Sequences: 5004
Number of extensions: 58590
Number of successful extensions: 279
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 424464280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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