Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_H09
(855 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0320 - 2320317-2320336,2320791-2320902,2321092-2321236,232... 31 0.89
05_07_0105 - 27716126-27716218,27716548-27716658,27716764-277168... 31 1.5
11_06_0610 - 25449085-25453284 30 2.0
01_01_1049 + 8275837-8275859,8276428-8276503,8276545-8276634,827... 29 3.6
01_01_0975 - 7686297-7686458,7687117-7687245,7687754-7687831,768... 29 3.6
09_04_0618 + 18988614-18989102,18989913-18990314,18990555-189908... 29 4.7
08_02_0193 - 14073103-14073246,14073332-14073481,14073571-140736... 29 4.7
06_01_0449 - 3176135-3176329,3176531-3177289,3177420-3177905,317... 29 4.7
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 29 4.7
10_08_0970 + 21944930-21945061,21945532-21945650,21945758-219458... 29 6.2
05_05_0290 - 23879064-23880035 29 6.2
10_08_0949 - 21759821-21759833,21759985-21760301,21760650-217607... 28 8.3
08_01_0774 + 7482311-7482919,7484012-7484077,7484211-7484384,748... 28 8.3
07_01_0461 + 3492302-3492413,3492868-3492964,3493053-3493131,349... 28 8.3
05_05_0174 - 22960732-22960815,22960907-22961419,22961576-229620... 28 8.3
01_06_0806 - 32123513-32123905 28 8.3
01_01_0274 - 2263304-2264211,2264490-2264673 28 8.3
>06_01_0320 -
2320317-2320336,2320791-2320902,2321092-2321236,
2321353-2321459,2321572-2321665,2321752-2321948,
2322311-2322382,2322504-2322618,2323060-2323176,
2323253-2323344,2323445-2323621,2323746-2323820,
2323911-2324051,2324671-2324859,2325298-2325363,
2325445-2325595,2325718-2325786,2326293-2326441,
2326526-2326657,2326756-2327081,2327167-2327203,
2327926-2327980,2328242-2328309,2328464-2328466
Length = 902
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -3
Query: 463 HTHNISFVYGRDLLPLVFSGELEGELR--HSRTGLLRDQLD 347
HTHNIS V LP++ +G +G +R HS T L + L+
Sbjct: 223 HTHNISAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLN 263
>05_07_0105 -
27716126-27716218,27716548-27716658,27716764-27716815,
27716895-27717034,27717298-27717422,27717514-27717638,
27717853-27717898,27718374-27718947
Length = 421
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 236 EGIKTLYDNVDVVTIRENTEGEYSGIEHEIVDGVVQSIKLITEEA-STRVAEFAFQFARE 412
E ++ L + D+V N +G+ IE EI+DGVV +++ + ST V + A +
Sbjct: 255 EALQKLNKHYDIVV---NIQGDEPLIEPEIIDGVVMALQRAPDAVFSTAVTALKPEDASD 311
Query: 413 NKRKKVTAVHKANIMRMSDGL 475
R K ++ + S GL
Sbjct: 312 TNRVKCVLDNQGYAIYFSRGL 332
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 740 PRDGGAPXPCTDSKSAPFLPMLPEGVRPSPPTS--PEHMSDMMSP 612
P + P P +++ S P P PEG PSPP S PE S + P
Sbjct: 712 PVEKSPPTPESEASSPP--PPAPEGHTPSPPKSSPPEEKSPPIPP 754
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 740 PRDGGAPXPCTDSKSAPFLPMLPEGVRPSPPTS 642
P + P P ++S S P P PEG PSPP S
Sbjct: 679 PTEKSPPTPESESSSPP--PPAPEGHMPSPPKS 709
>01_01_1049 +
8275837-8275859,8276428-8276503,8276545-8276634,
8276721-8276836,8276918-8277017,8277808-8277879,
8277954-8278001,8278093-8278170,8278272-8278391,
8278496-8278601,8279574-8279737,8280403-8280537,
8280766-8280896,8282016-8282094,8282284-8282373
Length = 475
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 352 LDGLHDPVDDLVLDTGILTLGVLSDRDHINVV 257
L G+ PVDDL D ++ G++ D+D N+V
Sbjct: 47 LKGMGFPVDDLEFDPDLVIRGLIMDKDKGNLV 78
>01_01_0975 -
7686297-7686458,7687117-7687245,7687754-7687831,
7688011-7688469,7690648-7690788,7691771-7692421
Length = 539
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -2
Query: 746 VLPRDGGAPXPCTDSKSAPFLPMLPEGVRPSPPTSP 639
V P AP P + P LP+ P + P PP P
Sbjct: 359 VEPTTAAAPPPPSPHAQPPLLPVWPRHLAPPPPPLP 394
>09_04_0618 +
18988614-18989102,18989913-18990314,18990555-18990806,
18991564-18991941,18992350-18992426,18992700-18992808,
18993424-18993574,18993810-18993903,18997072-18997474,
18997590-18997742,18998115-18998474
Length = 955
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = -2
Query: 740 PRDGGAPXPCTDSKS-APFLPMLPEGVRPSPPTSPEHMSDMMSPYRLGIXQ 591
P G P P ++ P P RP PP S EHM PY G Q
Sbjct: 438 PTGGMPPYPMPSFRADRPMGPFDMVDHRPPPPHSMEHMGADRMPYSYGCEQ 488
>08_02_0193 -
14073103-14073246,14073332-14073481,14073571-14073640,
14073900-14074021,14074260-14074395,14074492-14074967
Length = 365
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 701 KSAPFLPMLPEGVRPSPPTSPEHMSDMMSP 612
+ AP LP+L + P PPT+PE D SP
Sbjct: 17 RRAP-LPLLLSALSPPPPTTPESCPDGPSP 45
>06_01_0449 -
3176135-3176329,3176531-3177289,3177420-3177905,
3178302-3178421,3178637-3178703,3178784-3179007,
3179149-3179234,3179936-3180509
Length = 836
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 594 PARQTWKGSCTMLRQTVSRYRSSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVTF 424
P T G+C+ V + + + +L+ S ++Q + IRII +C+A+ F
Sbjct: 529 PHLVTLLGACSESSTLVYEFLPNGSLEDFLMCSDKRQTLTWQARIRIIAEICSALIF 585
>01_06_0823 +
32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = -2
Query: 725 APXPCTDSKSAPFLPMLP----EGVRPSPPTSPEHMSDMMSP 612
AP P + S AP P P GV P PP P+ ++ SP
Sbjct: 23 APSPSSSSAPAPASPRSPVPPPPGVPPPPPPPPQTLAAAASP 64
>10_08_0970 +
21944930-21945061,21945532-21945650,21945758-21945818,
21946241-21946288,21946610-21946726,21947434-21949044
Length = 695
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 713 CTDSKSAPFLPMLPEGVRPSPPTSPEHMSDMMSPYR 606
C D S P LP G P PPTSP + + + +R
Sbjct: 157 CFDITSLPRPMSLPVGSPPPPPTSPPYTGILAALHR 192
>05_05_0290 - 23879064-23880035
Length = 323
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -3
Query: 403 ELEGELR-HSRTGLLRDQLDGLHDPV-DDLVLDTGIL 299
E EG +R H R LR LD +HD + DD D+ IL
Sbjct: 81 EFEGFIRRHRRASTLRRVLDSIHDDLADDQERDSSIL 117
>10_08_0949 -
21759821-21759833,21759985-21760301,21760650-21760728,
21760816-21760912,21761305-21761410
Length = 203
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 97 RFLRNTEFAIWTPNSCYIHFLPFDRYF 17
RFL EF N YIH+L +RYF
Sbjct: 17 RFLLELEFIQCLANPTYIHYLAQNRYF 43
>08_01_0774 +
7482311-7482919,7484012-7484077,7484211-7484384,
7484473-7484603,7484726-7484802,7484981-7485064,
7487885-7488066,7488189-7488266,7489813-7489945,
7491610-7491670,7491861-7491942,7492143-7492271,
7492510-7492653,7493102-7493204,7493382-7493513,
7494127-7494485,7495149-7495229,7495384-7495450,
7495636-7495706,7496087-7496178,7496365-7496458,
7497692-7497789,7498206-7498341,7498599-7498618,
7498781-7498876,7498973-7499060,7499171-7499288,
7499738-7499759,7500203-7500326,7500625-7500702,
7500837-7500955,7501816-7501869,7502260-7502362,
7503133-7503261,7503345-7503453,7503788-7503819
Length = 1424
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -2
Query: 749 LVLPRDGGAPXPCTDSKSAPFLPMLPEGVRPSPP-TSPEHMSD 624
L LP P P PFLPM+P P PP SP + +
Sbjct: 157 LPLPPPPPPPMPPIPLPHMPFLPMMPHVPVPMPPMASPAELPE 199
>07_01_0461 +
3492302-3492413,3492868-3492964,3493053-3493131,
3493484-3493794,3494219-3494231
Length = 203
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 97 RFLRNTEFAIWTPNSCYIHFLPFDRYF 17
RFL EF N YIH+L +RYF
Sbjct: 19 RFLLELEFIQCLANPTYIHYLAQNRYF 45
>05_05_0174 -
22960732-22960815,22960907-22961419,22961576-22962058,
22964191-22964673
Length = 520
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 110 NANKIGLKGPLMTPVGKGYRSLNLALRKEFDLYANVRPCKSLEGIKTL 253
+A +GL + P+G+G+ +L+ ++ F L + P SL G+ +L
Sbjct: 337 SALNVGLGVGAILPLGRGFMNLSSSVPDRFYLGGHSSPVCSLSGLSSL 384
>01_06_0806 - 32123513-32123905
Length = 130
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 517 HQV*RAIP-GHGLPQHGAGPLPSLTCWXMP 603
+Q AIP + LP+HG+ PSLTC P
Sbjct: 30 YQARYAIPTNNDLPRHGSDTYPSLTCRDTP 59
>01_01_0274 - 2263304-2264211,2264490-2264673
Length = 363
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -3
Query: 373 TGLLRDQLDGLHDPVDDLVLDTGILTLGV 287
TGLL ++GL D VDDLV L +GV
Sbjct: 214 TGLLCAGMEGLDDGVDDLVAGIDDLEVGV 242
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,599,577
Number of Sequences: 37544
Number of extensions: 472994
Number of successful extensions: 1844
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1842
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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