Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_H02
         (796 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    34   0.006
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   2.7  
AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    25   2.7  
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    25   2.7  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    25   3.6  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           24   4.7  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   6.2  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   8.2  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 33.9 bits (74), Expect = 0.006
 Identities = 24/70 (34%), Positives = 31/70 (44%)
 Frame = +2

Query: 188 RRREGPIEMVNSKRSVAHMRGREHPSDPRERLRGGGVRSAGHVSGRLPAQPAPALQDNPP 367
           +RRE  +E    K + AH R R+  +       GGG  SA   S R P  P P      P
Sbjct: 160 KRREEKLEAQMEKLAAAHQRDRDVLNSLLAAKVGGGQPSA---SPRQPPTPLPRRSSAQP 216

Query: 368 RIRQQDTGRN 397
           + +QQ   RN
Sbjct: 217 QQQQQQQQRN 226


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 17/76 (22%), Positives = 29/76 (38%)
 Frame = +2

Query: 269 PRERLRGGGVRSAGHVSGRLPAQPAPALQDNPPRIRQQDTGRNTRSPRSKHPAVRSWRRH 448
           P ++  G GVR+   +SG    +P P +   P            + P+    A     + 
Sbjct: 29  PSKQAGGAGVRAERSISGTESTKPVPTVLGGPNLFAPSAVSSQLQRPQPTVLAASPAPQP 88

Query: 449 HAVPVRAIPAQQVHSP 496
              PV  +P+  V +P
Sbjct: 89  SLAPV--VPSSVVTAP 102


>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +2

Query: 440 RRHHAVPVRAIPAQQVHSPADVGSRAARHGHRT 538
           + HHA P+    A   H  A +   AA   H T
Sbjct: 185 QHHHAAPIAHYAAPIAHHAAPIAHHAAPIAHST 217


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +2

Query: 440 RRHHAVPVRAIPAQQVHSPADVGSRAARHGHRT 538
           + HHA P+    A   H  A +   AA   H T
Sbjct: 185 QHHHAAPIAHYAAPIAHHAAPIAHHAAPIAHST 217


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +2

Query: 446 HHAVPVRAIPAQQVHSPADVGSRAARHGHRT 538
           HHA P+    A   H  A +   AA   H T
Sbjct: 189 HHAAPIAHYAAPIAHHAAPIAHHAAPIAHST 219


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 538 GPMSVTGSPRPHISW 494
           GP  V+GS  PH+ W
Sbjct: 364 GPRKVSGSIMPHVLW 378


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 10/42 (23%), Positives = 18/42 (42%)
 Frame = +2

Query: 215  VNSKRSVAHMRGREHPSDPRERLRGGGVRSAGHVSGRLPAQP 340
            + ++ +    R R+H  D R  + GG +     V   L + P
Sbjct: 1090 IRARMARLRQRHRQHQQDERRGVEGGDIERGESVYPELASSP 1131


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 254 EHPSDPRERLRGGGVRSAG 310
           EHPSDP  R R     +AG
Sbjct: 498 EHPSDPEYRERADECSNAG 516


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,440
Number of Sequences: 2352
Number of extensions: 17311
Number of successful extensions: 56
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)