Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_H01
         (856 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    25   1.2  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   4.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   4.7  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 310 GHELTADYWEL 342
           GH+++ADYW L
Sbjct: 541 GHDISADYWSL 551


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 389 SSLRMASAPPGGASPINSQ*SAVSS*PPGAFFPSGTAS 276
           S++ M+S  P   SP++ +    S   PG F PSG  S
Sbjct: 35  SNMSMSSVGP--QSPLDMKPDTASLINPGNFSPSGPNS 70


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 389 SSLRMASAPPGGASPINSQ*SAVSS*PPGAFFPSGTAS 276
           S++ M+S  P   SP++ +    S   PG F PSG  S
Sbjct: 35  SNMSMSSVGP--QSPLDMKPDTASLINPGNFSPSGPNS 70


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,303
Number of Sequences: 438
Number of extensions: 4624
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)