Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_G24
(861 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 64 3e-10
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 64 3e-10
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 62 1e-09
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 53 4e-07
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 52 1e-06
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 51 2e-06
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 50 5e-06
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 50 5e-06
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 50 5e-06
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 50 5e-06
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 50 5e-06
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 50 5e-06
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 49 7e-06
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 49 9e-06
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 48 2e-05
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 47 3e-05
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 45 1e-04
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 45 1e-04
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 45 1e-04
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 45 1e-04
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 45 2e-04
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 44 3e-04
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 44 3e-04
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 42 8e-04
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 31 2.7
AE014298-2787|AAF48900.2| 2030|Drosophila melanogaster CG32542-P... 30 4.7
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 63.7 bits (148), Expect = 3e-10
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Frame = +3
Query: 348 LCTTLNTVIQKTTRPEAWSKGTVILFFKKG-DRALLKNYRAISLLSQIYKLFSKVLTNRL 524
+C N + + P+ W K T+++ K G D+ +YR ISLL+ + KLF K+L R+
Sbjct: 471 ICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRI 530
Query: 525 AS--RLNEFQPPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSV 692
+ R+N P Q GFR+ + T++ ++ + I+ E+ + + ++FD V
Sbjct: 531 SPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRV 588
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 63.7 bits (148), Expect = 3e-10
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Frame = +3
Query: 348 LCTTLNTVIQKTTRPEAWSKGTVILFFKKG-DRALLKNYRAISLLSQIYKLFSKVLTNRL 524
+C N + + P+ W K T+++ K G D+ +YR ISLL+ + KLF K+L R+
Sbjct: 471 ICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRI 530
Query: 525 AS--RLNEFQPPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSV 692
+ R+N P Q GFR+ + T++ ++ + I+ E+ + + ++FD V
Sbjct: 531 SPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRV 588
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 62.1 bits (144), Expect = 1e-09
Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 3/142 (2%)
Frame = +3
Query: 348 LCTTLNTVIQKTTRPEAWSKGTVILFFKKGD-RALLKNYRAISLLSQIYKLFSKVLTNRL 524
L N +++ P+ W +++ K G ++YR ISLLS + KL+ +++ NRL
Sbjct: 476 LALIYNAILRVQFFPKQWKMAAILMIHKPGKPEESPESYRPISLLSSLSKLWERLIANRL 535
Query: 525 ASRLNE--FQPPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSVET 698
+ E P Q GFR+G+ST++ +H L + I + + + +Q++FD V
Sbjct: 536 NDIMTERRILPDHQFGFRQGHSTVEQVHRLTKHILQAFDDKEYCNAVFIDMQQAFDRVWH 595
Query: 699 WAVLEFIQRCLVDYRYVEVLKS 764
++ +++ L Y VLKS
Sbjct: 596 DGLISKVKK-LFPAPYYGVLKS 616
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 53.2 bits (122), Expect = 4e-07
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = +3
Query: 390 PEAWSKGTVILFFKKG-DRALLKNYRAISLLSQIYKLFSKVLTNRLASR--LNEFQPPEQ 560
P+ W +I+ K G + + +YR ISLLS I KLF K L RL + P Q
Sbjct: 487 PQRWKMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEKCLLIRLNQHQTYHNIIPAHQ 546
Query: 561 AGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSV 692
GFR+ + T++ ++ + I+ EY + + ++FD V
Sbjct: 547 FGFRESHGTIEQVNRITTEIRTAFEYREYCTAVFLDVSQAFDKV 590
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 51.6 bits (118), Expect = 1e-06
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Frame = +3
Query: 363 NTVIQKTTRPEAWSKGTVILFFKKGDRALL-KNYRAISLLSQIYKLFSKVLTNRLASRLN 539
N++++ PEAW V + K G + K+YR ISLLS + K+F ++L RL R++
Sbjct: 537 NSILRLGYYPEAWKHAQVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKRL-FRVD 595
Query: 540 EFQ---PPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSV 692
F+ P Q GFRK + T I + Q I + E + + ++FD V
Sbjct: 596 LFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRV 649
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 51.2 bits (117), Expect = 2e-06
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Frame = +3
Query: 339 LNQLCTTLNTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLT 515
L L N+V+ P+AW ++I+ K G + +YR ISLL + K+ +++
Sbjct: 276 LQFLVLIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPISLLPSLGKIMERLIL 335
Query: 516 NRL--ASRLNEFQPPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDS 689
NRL + + P Q GFR + T + +H + + E V +Q++FD
Sbjct: 336 NRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQAFDR 395
Query: 690 V 692
V
Sbjct: 396 V 396
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 49.6 bits (113), Expect = 5e-06
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Frame = +3
Query: 363 NTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLTNRLASRLN 539
N++++ P+AW V + K G K+YR ISLLS + K+F ++L RL R++
Sbjct: 409 NSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL-FRVD 467
Query: 540 EFQ---PPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSV 692
F+ P Q GFRK + T I + Q I + E + + ++FD V
Sbjct: 468 LFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRV 521
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 49.6 bits (113), Expect = 5e-06
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Frame = +3
Query: 339 LNQLCTTLNTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLT 515
L L N+V+ P+AW ++I+ K G + +YR SLL + K+ +++
Sbjct: 474 LQFLALIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPTSLLPSLGKIMERLIL 533
Query: 516 NRLAS--RLNEFQPPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDS 689
NRL + + + P Q GFR + T + +H + + E V +Q++FD
Sbjct: 534 NRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQAFDR 593
Query: 690 V 692
V
Sbjct: 594 V 594
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 49.6 bits (113), Expect = 5e-06
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Frame = +3
Query: 363 NTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLTNRLASRLN 539
N++++ P+AW V + K G K+YR ISLLS + K+F ++L RL R++
Sbjct: 525 NSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL-FRVD 583
Query: 540 EFQ---PPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSV 692
F+ P Q GFRK + T I + Q I + E + + ++FD V
Sbjct: 584 LFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRV 637
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 49.6 bits (113), Expect = 5e-06
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Frame = +3
Query: 363 NTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLTNRLASRLN 539
N++++ P+AW V + K G K+YR ISLLS + K+F ++L RL R++
Sbjct: 525 NSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL-FRVD 583
Query: 540 EFQ---PPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSV 692
F+ P Q GFRK + T I + Q I + E + + ++FD V
Sbjct: 584 LFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRV 637
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 49.6 bits (113), Expect = 5e-06
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Frame = +3
Query: 363 NTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLTNRLASRLN 539
N++++ P+AW V + K G K+YR ISLLS + K+F ++L RL R++
Sbjct: 487 NSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL-FRVD 545
Query: 540 EFQ---PPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSV 692
F+ P Q GFRK + T I + Q I + E + + ++FD V
Sbjct: 546 LFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRV 599
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 49.6 bits (113), Expect = 5e-06
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Frame = +3
Query: 363 NTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLTNRLASRLN 539
N++++ P+AW V + K G K+YR ISLLS + K+F ++L RL R++
Sbjct: 525 NSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL-FRVD 583
Query: 540 EFQ---PPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSV 692
F+ P Q GFRK + T I + Q I + E + + ++FD V
Sbjct: 584 LFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRV 637
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 49.2 bits (112), Expect = 7e-06
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +3
Query: 363 NTVIQKTTRPEAWSKGTVILFFKKGDRALL-KNYRAISLLSQIYKLFSKVLTNRL--ASR 533
N++++ PEAW V + K G A ++YR ISLLS + K+F ++L RL
Sbjct: 525 NSILRLGYYPEAWKHAQVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLLKRLFKVDL 584
Query: 534 LNEFQPPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSV 692
+ P Q GFRK + + I + Q I + E + + ++FD V
Sbjct: 585 FKKAIPLHQFGFRKEHGSEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRV 637
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 48.8 bits (111), Expect = 9e-06
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Frame = +3
Query: 363 NTVIQKTTRPEAWSKGTVILFFKKGD-RALLKNYRAISLLSQIYKLFSKVLTNRLASRLN 539
N +++ P W G + + K G +YR ISLL I K+F +++ R+ S +
Sbjct: 480 NAIVRLQYFPYQWKLGIISMIHKPGKPEREPASYRPISLLPSISKVFERLIAVRIVSIME 539
Query: 540 E--FQPPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSV 692
P Q GFR G+ T++ +H + + I + S ++++FD V
Sbjct: 540 AQGITPEHQFGFRAGHCTVEQLHRVVEQILTAYDSKEYCNSLFLDIREAFDRV 592
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 48.0 bits (109), Expect = 2e-05
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +3
Query: 390 PEAWSKGTVILFFK-KGDRALLKNYRAISLLSQIYKLFSKVLTNR--LASRLNEFQPPEQ 560
P+ W K ++L K KG + ++YR + LL + KLF ++L R L + +Q
Sbjct: 455 PKRWKKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERILYARIELITESPTGLQGQQ 514
Query: 561 AGFRKGYSTLDHIHMLRQVIQKTEEYNR 644
GFRKG STLD + + +K + NR
Sbjct: 515 YGFRKGKSTLDALKSVTDAARKALDGNR 542
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 47.2 bits (107), Expect = 3e-05
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Frame = +3
Query: 303 SYXXXXNQYRIVLNQLCTTLNTVIQKTTRPEAWSKGTVILFFKKG-DRALLKNYRAISLL 479
SY N N++ N + P+A+ +I K D+ +YR ISL
Sbjct: 456 SYQMIKNSSHTTKNRITKLFNEIFNSHI-PQAYKTSLIIPILKPNTDKTKTSSYRPISLN 514
Query: 480 SQIYKLFSKVLTNRL--ASRLNEFQPPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLV 653
I K+ K++ RL N +Q GF+KG ST D + + +I K++ + LV
Sbjct: 515 CCIAKILDKIIAKRLWWLVTYNNLINDKQFGFKKGKSTSDCLLYVDYLITKSKMHT-SLV 573
Query: 654 SRVCGLQKSFDSVETWAVLEFIQRCLVDYRYVEVLKSLYKAAK 782
+ ++FD V ++++ +Q + ++ +K+ K
Sbjct: 574 T--LDFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRK 614
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 45.2 bits (102), Expect = 1e-04
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Frame = +3
Query: 363 NTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLTNRLASRLN 539
N +++ P W ++ + K G L +YR ISLLS + KL ++L RL ++
Sbjct: 81 NNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYD-ID 139
Query: 540 EFQ---PPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSVETWAVL 710
F P Q GFRK + + + Q I K + + + ++FD V +L
Sbjct: 140 SFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLL 199
Query: 711 EFIQRCLVDYRY 746
+ R + Y +
Sbjct: 200 YKLSRLIPRYLF 211
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 45.2 bits (102), Expect = 1e-04
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Frame = +3
Query: 363 NTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLTNRLASRLN 539
N +++ P W ++ + K G L +YR ISLLS + KL ++L RL ++
Sbjct: 528 NNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILPKRLYD-ID 586
Query: 540 EFQ---PPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSVETWAVL 710
F P Q GFRK + + + Q I K + + + ++FD V +L
Sbjct: 587 SFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLL 646
Query: 711 EFIQRCLVDYRY 746
+ R + Y +
Sbjct: 647 YKLSRLIPRYLF 658
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 45.2 bits (102), Expect = 1e-04
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Frame = +3
Query: 363 NTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLTNRLASRLN 539
N +++ P W ++ + K G L +YR ISLLS + KL ++L RL ++
Sbjct: 528 NNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYD-ID 586
Query: 540 EFQ---PPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSVETWAVL 710
F P Q GFRK + + + Q I K + + + ++FD V +L
Sbjct: 587 SFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLL 646
Query: 711 EFIQRCLVDYRY 746
+ R + Y +
Sbjct: 647 YKLSRLIPRYLF 658
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 45.2 bits (102), Expect = 1e-04
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Frame = +3
Query: 363 NTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLTNRLASRLN 539
N +++ P W ++ + K G L +YR ISLLS + KL ++L RL ++
Sbjct: 528 NNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYD-ID 586
Query: 540 EFQ---PPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSVETWAVL 710
F P Q GFRK + + + Q I K + + + ++FD V +L
Sbjct: 587 SFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLL 646
Query: 711 EFIQRCLVDYRY 746
+ R + Y +
Sbjct: 647 YKLSRLIPRYLF 658
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 44.8 bits (101), Expect = 2e-04
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +3
Query: 345 QLCTTLNTVIQKTTRPEAWSKGTVILFFKKGDRALLKNYRAISLLSQIYKLFSKVLTNRL 524
++C N + + P+ W K +I+ K +YR ISLL+ + KLF K L R+
Sbjct: 12 RICLLFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQPSYRPISLLTCLSKLFEKGLLLRI 71
Query: 525 ASRLNEFQ--PPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSV 692
+ L P Q F + ++ ++ + I+ E+ + + ++FD V
Sbjct: 72 SPHLKTHNTLPSYQFDFPAKHGAIEQVNRITTEIRTAFEHREYCTALFLDVAQAFDRV 129
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 44.0 bits (99), Expect = 3e-04
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Frame = +3
Query: 339 LNQLCTTLNTVIQKTTRPEAWSKGTVILFFKKGDRA-LLKNYRAISLLSQIYKLFSKVLT 515
+N + N +Q P W ++ K G ++YR ISLLS + K+ K++
Sbjct: 497 INHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIK 556
Query: 516 NRLASRL--NEFQPPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDS 689
RL L + P Q GFR G +T+ LR I+++ + + + ++ +FD+
Sbjct: 557 LRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSVGLVTLDIEAAFDT 616
Query: 690 V 692
V
Sbjct: 617 V 617
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 44.0 bits (99), Expect = 3e-04
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Frame = +3
Query: 339 LNQLCTTLNTVIQKTTRPEAWSKGTVILFFKKGDRA-LLKNYRAISLLSQIYKLFSKVLT 515
+N + N +Q P W ++ K G ++YR ISLLS + K+ K++
Sbjct: 445 INHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIK 504
Query: 516 NRLASRL--NEFQPPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDS 689
RL L + P Q GFR G +T+ LR I+++ + + + ++ +FD+
Sbjct: 505 LRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSVGLVTLDIEAAFDT 564
Query: 690 V 692
V
Sbjct: 565 V 565
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 42.3 bits (95), Expect = 8e-04
Identities = 34/157 (21%), Positives = 62/157 (39%), Gaps = 3/157 (1%)
Frame = +3
Query: 303 SYXXXXNQYRIVLNQLCTTLNTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLL 479
SY N + +L N ++ P W +I K + +YR ISLL
Sbjct: 460 SYPMLKNLSPHLKTKLLDIFNQILTTGKYPHTWRSAIIIPISKPNKPPSDINSYRPISLL 519
Query: 480 SQIYKLFSKVLTNRLA--SRLNEFQPPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLV 653
S + K K++ RL + + Q F+ +ST+D + ++ +
Sbjct: 520 SCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSNHSTMDALLRIQHFASNALSTKNHVS 579
Query: 654 SRVCGLQKSFDSVETWAVLEFIQRCLVDYRYVEVLKS 764
+++FD V AVL ++R + R ++K+
Sbjct: 580 ILATDFERAFDRVGIHAVLCRLERWGIGPRLYNLIKA 616
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 30.7 bits (66), Expect = 2.7
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 3/131 (2%)
Frame = +3
Query: 327 YRIVLNQLCTTLNTVIQKTTRPEAWSKGTVILFFKKGDRALLK--NYRAISLLSQIYKLF 500
+R + L + + I+ P W V+ K D+ + +YR I LL K+
Sbjct: 466 WRAIPEHLASLFSRCIRLGYFPAEWKCPRVVSLLKGPDKDKCEPSSYRGICLLPVFGKVL 525
Query: 501 SKVLTNRLASRLNEFQPPEQAGFRKGYSTLD-HIHMLRQVIQKTEEYNRPLVSRVCGLQK 677
++ NR+ L E Q GFR+G D H+ V +Y ++ +
Sbjct: 526 EAIMVNRVREVLPE-GCRWQFGFRQGRCVEDAWRHVKSSVGASAAQY---VLGTFVDFKG 581
Query: 678 SFDSVETWAVL 710
+FD+VE A L
Sbjct: 582 AFDNVEWSAAL 592
>AE014298-2787|AAF48900.2| 2030|Drosophila melanogaster CG32542-PA
protein.
Length = 2030
Score = 29.9 bits (64), Expect = 4.7
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 595 WSSVL*PLRNPACSGGWNSLSLEAKRFVRTFENSL 491
WSS+L PLR G WN LS+ + + R N++
Sbjct: 276 WSSLLRPLRGREPEGMWNLLSIVREMYRRCDRNAV 310
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,915,487
Number of Sequences: 53049
Number of extensions: 818997
Number of successful extensions: 2530
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2509
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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