Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_G24
(861 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 122 3e-28
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 122 3e-28
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 121 8e-28
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 52 7e-07
Z74043-12|CAA98548.1| 503|Caenorhabditis elegans Hypothetical p... 31 1.1
Z74040-7|CAA98515.1| 503|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 30 2.4
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 29 3.2
AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical ... 28 7.4
Z81109-12|CAE17917.2| 364|Caenorhabditis elegans Hypothetical p... 28 9.8
Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z78017-2|CAD44160.1| 615|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z73976-10|CAD44151.1| 615|Caenorhabditis elegans Hypothetical p... 28 9.8
Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical pr... 28 9.8
U46670-4|AAC48175.1| 332|Caenorhabditis elegans Suppressor prot... 28 9.8
U43891-1|AAB61087.1| 332|Caenorhabditis elegans SUP-10 precurso... 28 9.8
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 122 bits (294), Expect = 3e-28
Identities = 59/146 (40%), Positives = 86/146 (58%)
Frame = +3
Query: 336 VLNQLCTTLNTVIQKTTRPEAWSKGTVILFFKKGDRALLKNYRAISLLSQIYKLFSKVLT 515
V++ + N + P+ W L FKKGDR L+NYR I LL +YK+F+K L
Sbjct: 582 VIDLITDRFNRYLHSRNVPKPWKTSKTTLIFKKGDRENLENYRPICLLPVLYKVFTKCLL 641
Query: 516 NRLASRLNEFQPPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSVE 695
NR+ L+E QP EQAGFR+ +ST+DHIH L+++++ EY PL +K+FDSVE
Sbjct: 642 NRMRRSLDEAQPVEQAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTLVFIDFKKAFDSVE 701
Query: 696 TWAVLEFIQRCLVDYRYVEVLKSLYK 773
A+ + + D Y+++LK YK
Sbjct: 702 HQAIWKSLDEQGADGAYIDLLKECYK 727
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 122 bits (294), Expect = 3e-28
Identities = 59/146 (40%), Positives = 86/146 (58%)
Frame = +3
Query: 336 VLNQLCTTLNTVIQKTTRPEAWSKGTVILFFKKGDRALLKNYRAISLLSQIYKLFSKVLT 515
V++ + N + P+ W L FKKGDR L+NYR I LL +YK+F+K L
Sbjct: 321 VIDLITDRFNRYLHSRNVPKPWKTSKTTLIFKKGDRENLENYRPICLLPVLYKVFTKCLL 380
Query: 516 NRLASRLNEFQPPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSVE 695
NR+ L+E QP EQAGFR+ +ST+DHIH L+++++ EY PL +K+FDSVE
Sbjct: 381 NRMRRSLDEAQPVEQAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTLVFIDFKKAFDSVE 440
Query: 696 TWAVLEFIQRCLVDYRYVEVLKSLYK 773
A+ + + D Y+++LK YK
Sbjct: 441 HQAIWKSLDEQGADGAYIDLLKECYK 466
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 121 bits (291), Expect = 8e-28
Identities = 58/146 (39%), Positives = 86/146 (58%)
Frame = +3
Query: 336 VLNQLCTTLNTVIQKTTRPEAWSKGTVILFFKKGDRALLKNYRAISLLSQIYKLFSKVLT 515
V++ + N + P+ W L FKKGDR L+NYR I LL +YK+F+K L
Sbjct: 411 VIDLITDRFNRYLHSRNVPKPWKTSKTTLIFKKGDRENLENYRPICLLPVLYKVFTKCLL 470
Query: 516 NRLASRLNEFQPPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSVE 695
NR+ L+E QP EQAGFR+ +ST+DHIH L+++++ EY PL +K+FD+VE
Sbjct: 471 NRMRRSLDEAQPVEQAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTLVFIDFKKAFDTVE 530
Query: 696 TWAVLEFIQRCLVDYRYVEVLKSLYK 773
A+ + + D Y+++LK YK
Sbjct: 531 HQAIWKSLDEQGADGAYIDLLKECYK 556
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 51.6 bits (118), Expect = 7e-07
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Frame = +3
Query: 363 NTVIQKTTRPEAWSKGTVILFFK-KGDRALLKNYRAISLLSQIYKLFSKVLTNRLASRLN 539
N + P+ W K VI+ K K D A+ +YR ISLLS I KL K + R+ + +
Sbjct: 372 NVSLSTNIIPDKWKKANVIMIPKPKKDPAIASSYRPISLLSPIAKLLEKAILKRIKNSIE 431
Query: 540 EFQPPEQAGFRKGYSTLDH-IHMLRQVIQKTEEYNRP--LVSRVCGLQKSFDSVET 698
P Q GF+ +ST I + +I N P + L+ +FD V T
Sbjct: 432 --SPAHQHGFKPEHSTTTAVIQVTNDIIGGLNMKNPPERAIMACLDLRAAFDKVPT 485
>Z74043-12|CAA98548.1| 503|Caenorhabditis elegans Hypothetical
protein T19B10.1 protein.
Length = 503
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 156 YASHTPKPFAHPENDHRAPLVRHYTEDIPDVSI 254
Y S P P AHP + P+V TED+P V I
Sbjct: 32 YGSKLPGPPAHPIFGNLGPIVGKKTEDLPSVFI 64
>Z74040-7|CAA98515.1| 503|Caenorhabditis elegans Hypothetical
protein T19B10.1 protein.
Length = 503
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 156 YASHTPKPFAHPENDHRAPLVRHYTEDIPDVSI 254
Y S P P AHP + P+V TED+P V I
Sbjct: 32 YGSKLPGPPAHPIFGNLGPIVGKKTEDLPSVFI 64
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 624 KTEEYNRPLVSRVCGLQKSFDSVETWAVLEFIQRCLVDYRYVEVLKSLYK 773
K+ R L +K+FDSVE A+ + + D Y+++LK YK
Sbjct: 29 KSAGNTRSLTLVFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYK 78
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/80 (22%), Positives = 34/80 (42%)
Frame = +1
Query: 343 TNYAQRSTPSSKKRLDRKPGARVLSFCSLKRETVLCSRTTELFHFLAKFISCSRKSLQIA 522
T ++TP R D R+ FC + ++ T+L H +++ + +
Sbjct: 679 TTTTPKNTPKVVLRKDLNDVKRMKQFCDMATSPMVMDTPTKLSHENGHAWVGTKQVISVT 738
Query: 523 WPLDLTSSNLRSRLGFAKAT 582
L+ R+RL ++KAT
Sbjct: 739 RTPSLSRRQSRARLSYSKAT 758
>AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical
protein Y39A1B.2 protein.
Length = 1003
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = -1
Query: 792 WTVIWQLYINSSTPQRIDNRLGIAV*IPEQPKFRRSRSFFVVHKRETPEDDCI 634
W+++ L + +RI N I V P P+F ++ TPE+ C+
Sbjct: 122 WSIVQSLTVEDEDDRRI-NYPSICVKFPIPPEFSKALHSLFAPNMTTPEEICV 173
>Z81109-12|CAE17917.2| 364|Caenorhabditis elegans Hypothetical
protein R10D12.17 protein.
Length = 364
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 1 YWNIHLRWLRFLTSCTESIVNSLLNCRVKSVL 96
Y NI LRW+ L S T + L +CR ++ +
Sbjct: 287 YANISLRWIFALKSSTRCFLCVLFSCRYRNAI 318
>Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical
protein F21G4.6 protein.
Length = 1885
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 534 LNEFQPPEQAGFRKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSV 692
++ F PE+ + + TL H QK E Y +P+++ L KS + +
Sbjct: 829 VSTFARPEECAHSELFDTLMHFLATATRFQKDESYQKPMIAATM-LMKSIEKL 880
>Z78017-2|CAD44160.1| 615|Caenorhabditis elegans Hypothetical
protein T07C12.12 protein.
Length = 615
Score = 27.9 bits (59), Expect = 9.8
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = +3
Query: 393 EAWSKGTVILFFKKGDRALLKNYRAISLLSQIYKLFS-KVLTNRLASRLNEFQPPEQAGF 569
E W + L +K G + L+ AI + + K + KVL ++ +LN F P +Q
Sbjct: 152 EFWKCPQLSLHYKPGTKILIVPPCAIRKGTFLLKRNNCKVLGGQVLPQLNSFVPVDQ--- 208
Query: 570 RKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSVETWAVLEFIQR 725
Y+ L I L +K EE + S ++ +SV ++ +FI R
Sbjct: 209 ---YARLLGIKSLNLSAKKKEEVKTTMNSNTDSIRTVTNSVIDSSLPKFIDR 257
>Z73976-10|CAD44151.1| 615|Caenorhabditis elegans Hypothetical
protein T07C12.12 protein.
Length = 615
Score = 27.9 bits (59), Expect = 9.8
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = +3
Query: 393 EAWSKGTVILFFKKGDRALLKNYRAISLLSQIYKLFS-KVLTNRLASRLNEFQPPEQAGF 569
E W + L +K G + L+ AI + + K + KVL ++ +LN F P +Q
Sbjct: 152 EFWKCPQLSLHYKPGTKILIVPPCAIRKGTFLLKRNNCKVLGGQVLPQLNSFVPVDQ--- 208
Query: 570 RKGYSTLDHIHMLRQVIQKTEEYNRPLVSRVCGLQKSFDSVETWAVLEFIQR 725
Y+ L I L +K EE + S ++ +SV ++ +FI R
Sbjct: 209 ---YARLLGIKSLNLSAKKKEEVKTTMNSNTDSIRTVTNSVIDSSLPKFIDR 257
>Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical
protein R09E10.7 protein.
Length = 1717
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 595 WSSVL*PLRNPACSGGWNSLSLEAKRFVRTFENSL 491
W++++ PLR G WN L + + F R EN++
Sbjct: 385 WTTMIKPLRCRDPEGMWNLLQMIREMFARNDENAV 419
>U46670-4|AAC48175.1| 332|Caenorhabditis elegans Suppressor protein
10 protein.
Length = 332
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/74 (24%), Positives = 31/74 (41%)
Frame = +1
Query: 526 PLDLTSSNLRSRLGFAKATVR*TTSTC*DRLFRRLKNTIVLWCLAFVDYKKASTPSKLGL 705
P T S + R+ + + + TC + ++ I LW F K P +
Sbjct: 38 PKSKTESVIEERMEYGRMILLVCNKTC-----AKHRSDIPLWLKEFNQKKGYQEPETITY 92
Query: 706 FWNSYSDA*SIIDT 747
++++Y A S IDT
Sbjct: 93 YYHTYRQAVSFIDT 106
>U43891-1|AAB61087.1| 332|Caenorhabditis elegans SUP-10 precursor
protein.
Length = 332
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/74 (24%), Positives = 31/74 (41%)
Frame = +1
Query: 526 PLDLTSSNLRSRLGFAKATVR*TTSTC*DRLFRRLKNTIVLWCLAFVDYKKASTPSKLGL 705
P T S + R+ + + + TC + ++ I LW F K P +
Sbjct: 38 PKSKTESVIEERMEYGRMILLVCNKTC-----AKHRSDIPLWLKEFNQKKGYQEPETITY 92
Query: 706 FWNSYSDA*SIIDT 747
++++Y A S IDT
Sbjct: 93 YYHTYRQAVSFIDT 106
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,474,610
Number of Sequences: 27780
Number of extensions: 416566
Number of successful extensions: 1094
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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