Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_G21
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0083 + 27580710-27580767,27580869-27580924,27581024-275811...    91   1e-18
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411           32   0.53 
12_01_0676 + 5765154-5765241,5765329-5765453,5765533-5765604,576...    28   8.6  
04_01_0451 + 5845249-5846133,5846220-5846509,5855590-5856060,585...    28   8.6  

>05_07_0083 +
           27580710-27580767,27580869-27580924,27581024-27581133,
           27582083-27582148,27582149-27582278,27582636-27582737,
           27582969-27583010,27583153-27583194,27583356-27583432,
           27583730-27583856,27583953-27584120,27584359-27584484,
           27584575-27584685,27584776-27584910,27585540-27585614,
           27585827-27585934,27586015-27586101,27586187-27586273,
           27586762-27586830
          Length = 591

 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 41/79 (51%), Positives = 53/79 (67%)
 Frame = +1

Query: 550 LAIGTHDLDTIHGPFIYDALPPNEIKFKALNQPKELTAPELMELYSNHAQLKQYLGIIXE 729
           +AIGTHDLDT+ GPF Y+ALPP EI F  L Q +   A +LME Y +  +LK++L II  
Sbjct: 157 VAIGTHDLDTLKGPFSYEALPPQEINFVPLKQEESFRADKLMEFYKSDMKLKKFLHIIEN 216

Query: 730 SXXYPIIKDXXGVILSMPP 786
           S  YP+I D    +LS+PP
Sbjct: 217 SPVYPVIYDSNRTVLSLPP 235



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 24/55 (43%), Positives = 39/55 (70%), Gaps = 4/55 (7%)
 Frame = +2

Query: 146 KNFXDLCFKFGLELDEVTTEKQMLIKEQG-DQADAEL---SDEILYRIDIPANRY 298
           + F  LCF+FG+ELD+VTTEK ++ KE+  +  D E+    DE++Y+I++ AN +
Sbjct: 22  EEFEVLCFEFGIELDDVTTEKAIIRKEKHLEDDDGEVDGDDDEVIYKIEVAANSF 76



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = +1

Query: 82  MPTISLKRDALFAALGSTYTDEEFQXPMFQ 171
           MPT+S+ RD  F ALG TYT EEF+   F+
Sbjct: 1   MPTVSVGRDRFFVALGRTYTQEEFEVLCFE 30


>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
          Length = 885

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 255 DNSASAWSPCSLINICFSVVTSSSSKPNLKHRSLKFFISV 136
           +N  +  SP S++  CFS  TSS   P  K+   ++F+S+
Sbjct: 627 NNEPNQPSPTSVLEACFSNDTSSLGSPTEKNEGKEYFVSI 666


>12_01_0676 +
           5765154-5765241,5765329-5765453,5765533-5765604,
           5765728-5765802,5765880-5765905,5766709-5766870,
           5766963-5767037,5767133-5767204,5767289-5767363,
           5767461-5767529,5767839-5767910,5768030-5768161,
           5768430-5768920,5769315-5769476,5769570-5769709,
           5769818-5770037,5770398-5770633,5771560-5772051
          Length = 927

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 6/72 (8%)
 Frame = -3

Query: 782 GIDNITPXXSLMIGYXXLSXMIPKYCFN------WA*FEYNSINSGAVNSFG*LRALNLI 621
           G+DN+T       G   LS  IP   FN          + N  +    ++ G L  L ++
Sbjct: 173 GLDNLTSTKHFHFGINQLSGSIPSQIFNSNMKLIHLLLDNNKFSGSIPSTLGLLNTLEVL 232

Query: 620 SFGGNAS*MNGP 585
            F  NA  + GP
Sbjct: 233 RFDNNAQ-LTGP 243


>04_01_0451 +
           5845249-5846133,5846220-5846509,5855590-5856060,
           5856898-5857063,5857100-5857498,5858031-5858075
          Length = 751

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 663 CS*FFWLIKSFELNLIWRQCIIDEWTM 583
           CS  F ++K    + I R C++D WTM
Sbjct: 623 CSDIFVVLKFLGFDTIPRCCVVDRWTM 649


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,365,733
Number of Sequences: 37544
Number of extensions: 362972
Number of successful extensions: 771
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)