Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_G21
         (880 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50044-8|CAA90360.1|  591|Caenorhabditis elegans Hypothetical pr...   100   1e-21
AC024810-5|AAF60763.1|  507|Caenorhabditis elegans Hypothetical ...    48   9e-06
Z48045-1|CAA88103.2|  630|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AF025464-2|AAN84804.1|  496|Caenorhabditis elegans Prion-like-(q...    28   7.7  
AF025464-1|AAN84805.1|  529|Caenorhabditis elegans Prion-like-(q...    28   7.7  

>Z50044-8|CAA90360.1|  591|Caenorhabditis elegans Hypothetical
           protein F22B5.9 protein.
          Length = 591

 Score =  100 bits (240), Expect = 1e-21
 Identities = 49/79 (62%), Positives = 54/79 (68%)
 Frame = +1

Query: 550 LAIGTHDLDTIHGPFIYDALPPNEIKFKALNQPKELTAPELMELYSNHAQLKQYLGIIXE 729
           +AIGTHDLDTI GPF Y A  P +IKFK LNQ KE TA ELM LYS  + LK YL II  
Sbjct: 158 VAIGTHDLDTIQGPFEYRAEAPKDIKFKPLNQTKEYTAEELMTLYSTDSHLKAYLPIIQN 217

Query: 730 SXXYPIIKDXXGVILSMPP 786
              YP+I D  GV+ SMPP
Sbjct: 218 HPVYPVIYDKNGVVCSMPP 236



 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 33/44 (75%), Positives = 38/44 (86%)
 Frame = +3

Query: 420 TAQIRPYAVAAVLRGITFTKESYDSFINLQDKLHQNICRKRTLV 551
           TAQ+RP+ V AVLR I+F  +SY SFI+LQDKLHQNICRKRTLV
Sbjct: 115 TAQVRPFVVGAVLRDISFDADSYASFIDLQDKLHQNICRKRTLV 158



 Score = 72.1 bits (169), Expect = 5e-13
 Identities = 30/51 (58%), Positives = 43/51 (84%)
 Frame = +2

Query: 146 KNFXDLCFKFGLELDEVTTEKQMLIKEQGDQADAELSDEILYRIDIPANRY 298
           K F +LCF++GLELDE+T+EK  + KEQG +A ++L+D+ +Y+IDIPANRY
Sbjct: 22  KEFDELCFEYGLELDEITSEKAAVEKEQGTRAASDLNDQEVYKIDIPANRY 72


>AC024810-5|AAF60763.1|  507|Caenorhabditis elegans Hypothetical
           protein Y54E10A.6 protein.
          Length = 507

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
 Frame = +1

Query: 553 AIGTHDLDTIHGPFIYDALPPNEIKFKALNQPKELTAPELMELYSNHAQ----------- 699
           AIGTH LD+   P  Y ALP +E+  +ALN+   ++A EL++     A+           
Sbjct: 339 AIGTHRLDSFQLPLCYMALPKDELYIRALNKKSSVSASELLDSLLRDAELARKRSKRSTV 398

Query: 700 --LKQYLGIIXESXXYPIIKDXXGVILSMPPXXXXD 801
             L +YL I+ +      + D   +++S+PP    D
Sbjct: 399 DPLHKYLHIVKDENILACLVDSQQIVISLPPITNSD 434


>Z48045-1|CAA88103.2|  630|Caenorhabditis elegans Hypothetical
           protein C41C4.3 protein.
          Length = 630

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
 Frame = -2

Query: 276 IL*RISSDNSASAWS---PC-SLINI------CFSVVTSSSSKPNLKHRSLKFFISVCRT 127
           I+ +ISS N AS      PC SL N        F + +     PN+  R    F+ V R 
Sbjct: 60  IMSKISSANDASGSKMLHPCYSLSNTNNYKNQLFDIFSVGEFAPNICERQCAHFVDVFRF 119

Query: 126 ECGEKR 109
           ECG++R
Sbjct: 120 ECGDRR 125


>AF025464-2|AAN84804.1|  496|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
           isoform a protein.
          Length = 496

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -2

Query: 420 WPSLGVKSYSLHIFSLCTEVEVSXPWNTNRPSTSPSRHN 304
           WP LG +++   +   C+ V  +  W  +   TSP   N
Sbjct: 104 WPRLGAQNFDAFVLDGCSRVTDTYQWPQSDVVTSPDIQN 142


>AF025464-1|AAN84805.1|  529|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
           isoform b protein.
          Length = 529

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -2

Query: 420 WPSLGVKSYSLHIFSLCTEVEVSXPWNTNRPSTSPSRHN 304
           WP LG +++   +   C+ V  +  W  +   TSP   N
Sbjct: 126 WPRLGAQNFDAFVLDGCSRVTDTYQWPQSDVVTSPDIQN 164


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,133,475
Number of Sequences: 27780
Number of extensions: 341055
Number of successful extensions: 752
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)