Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_G20
         (851 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0447 + 17688248-17688319,17688414-17688515,17688852-176889...    31   1.5  
10_08_0516 + 18478743-18478830,18478940-18479319,18479406-184796...    30   2.0  
05_03_0253 - 11014334-11014592,11015061-11015296,11015370-11015870     29   4.7  
04_04_0712 + 27476319-27476569,27477150-27477402,27477535-274779...    29   6.2  
07_03_1558 - 27722852-27722963,27723191-27723240,27723338-277234...    28   8.2  
04_03_0448 - 16020773-16021066,16023040-16023291,16023470-160236...    28   8.2  
04_03_0132 - 11647230-11647432,11647520-11647982,11648159-116482...    28   8.2  
02_01_0717 + 5351504-5351602,5353401-5353499,5353574-5353675,535...    28   8.2  

>09_04_0447 +
           17688248-17688319,17688414-17688515,17688852-17688981,
           17689198-17689290,17689363-17689451,17689889-17689969,
           17690118-17690207,17690653-17690772,17690877-17690927,
           17691125-17691171,17691321-17691378,17691451-17691507
          Length = 329

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 575 GSVREFYEAIPHLTAVSKDRNFALEIIAPSLPGYG 679
           G VR+ YE+  HL  V+ DR  A + +  S+P  G
Sbjct: 23  GKVRDVYESGEHLVLVTTDRQSAFDRVLASIPFKG 57


>10_08_0516 +
           18478743-18478830,18478940-18479319,18479406-18479641,
           18480280-18480538
          Length = 320

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 20/77 (25%), Positives = 34/77 (44%)
 Frame = +2

Query: 455 NQYPHFKTNIQGLNIHFMRITPKVPKDVEIVPLLLLHGWPGSVREFYEAIPHLTAVSKDR 634
           +Q  H    I+GLN+H  ++        E+  ++ LHG+P    E + +  H    +   
Sbjct: 3   DQIEHLHLPIRGLNLHIAQVGKGEISLYELGTVVFLHGFP----EIWYSWRHQMLAAAAA 58

Query: 635 NFALEIIAPSLPGYGFS 685
            +    +AP   GYG S
Sbjct: 59  GY--RAVAPDWRGYGLS 73


>05_03_0253 - 11014334-11014592,11015061-11015296,11015370-11015870
          Length = 331

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +2

Query: 548 PLLLLHGWPGSVREFYEAIPHLTAVSKDRNFALEIIAPSLPGYGFSD 688
           P+LLLHG+P    + + A  H      D  +    +AP L GYG SD
Sbjct: 36  PVLLLHGFP----QVWYAWRHQMRALADAGY--RAVAPDLRGYGDSD 76


>04_04_0712 +
           27476319-27476569,27477150-27477402,27477535-27477914,
           27479738-27479864,27479945-27480110,27480221-27480359,
           27481854-27481987,27482087-27482229,27482367-27482565,
           27482688-27483010
          Length = 704

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 587 EFYEAIPHLTAVSKDRNFALEIIAPSLPGYGFSD 688
           EF    P    +S+D+  ALE+I P  PG+  SD
Sbjct: 623 EFNVEFPESGVLSRDQCRALEMILPPKPGHQLSD 656


>07_03_1558 -
           27722852-27722963,27723191-27723240,27723338-27723406,
           27723507-27723571,27724058-27724145,27724294-27724362
          Length = 150

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 315 NASRNEDLSPLHWRVLASNTGSIRNNWTVGSNIGQKNTH 431
           NA+ +E  +PLHW  L  +   I+     G+++   N+H
Sbjct: 77  NATNSEKNTPLHWACLNGHIEVIKALICAGASVSALNSH 115


>04_03_0448 -
           16020773-16021066,16023040-16023291,16023470-16023605,
           16023713-16023937,16024467-16024851,16025142-16025421
          Length = 523

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 547 YYFNVFRDLWSNPHEVNIQTLDISLEMRILVKELLPFSEW 428
           Y F   R+   NP  + +  LD +L  R+ +KEL   S W
Sbjct: 184 YMFEYGREDGHNPVILELAKLDFNLLQRVHLKELKEISRW 223


>04_03_0132 -
           11647230-11647432,11647520-11647982,11648159-11648271,
           11648956-11649412
          Length = 411

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 401 WLKYWAEEYPFAERQKFLNQYPHF 472
           W KY+  +  +A R  FL  YPHF
Sbjct: 344 WGKYFLVDSGYASRYGFLPSYPHF 367


>02_01_0717 +
           5351504-5351602,5353401-5353499,5353574-5353675,
           5353756-5353815,5353900-5354006,5354114-5354196,
           5354372-5354462,5354561-5354768
          Length = 282

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 343 GERSSFLDAFFKFFYHRFTESDLEGFDA 260
           GE +  L  +F+  Y + TE+D+E F+A
Sbjct: 104 GEAADNLQEYFRAVYKKVTEADIEEFEA 131


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,169,043
Number of Sequences: 37544
Number of extensions: 490117
Number of successful extensions: 1310
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)