Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_G18
         (863 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM079947-1|CAL04093.1|  100|Homo sapiens immunoglobulin heavy ch...    34   0.77 
AF471330-1|AAQ05505.1|  127|Homo sapiens Ig heavy chain variable...    33   1.3  
DQ118267-1|AAZ94749.1|   79|Homo sapiens immunoglobulin heavy ch...    33   1.8  
AM079884-1|CAL04030.1|  101|Homo sapiens immunoglobulin heavy ch...    33   1.8  
BC112034-1|AAI12035.1|  157|Homo sapiens hypothetical protein LO...    32   2.3  
BC093711-1|AAH93711.1|  157|Homo sapiens hypothetical protein LO...    32   2.3  
AM079202-1|CAL03348.1|  101|Homo sapiens immunoglobulin heavy ch...    31   4.1  
AK125693-1|BAC86247.1|  321|Homo sapiens protein ( Homo sapiens ...    31   5.4  
AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant prot...    31   5.4  
AM079105-1|CAL03251.1|  101|Homo sapiens immunoglobulin heavy ch...    31   7.2  

>AM079947-1|CAL04093.1|  100|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 100

 Score = 33.9 bits (74), Expect = 0.77
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = -3

Query: 354 LSAASSG-HFGLPRRTLVFKDEGTIIETVPLPGSGIGTGFPFAQRALFFIIFKNYKKTRH 178
           LS A+SG +F +   + V +  G  +E V   GSG GT +  + +  F I   N K T H
Sbjct: 23  LSCAASGFNFNIYAMSWVRQAPGKGLEWVSSGGSGGGTYYADSVKGRFTISRDNSKNTVH 82

Query: 177 IDIRSLLELRID*LASNYCSR 115
           + + S   LR +  A  YC++
Sbjct: 83  LQMNS---LRAEDTAVYYCAK 100


>AF471330-1|AAQ05505.1|  127|Homo sapiens Ig heavy chain variable
           region, VH3 family protein.
          Length = 127

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
 Frame = -3

Query: 354 LSAASSGH-FGLPRRTLVFKDEGTIIETVP-LPGSGIGTGFPFAQRALFFIIFKNYKKTR 181
           LS A+SG  F       V +  G  +E V  + GSG  T +  + +  F I   N K T 
Sbjct: 20  LSCAASGFTFNNYAMNWVRQAPGKGLEWVSVISGSGDSTYYADSVKGRFTISRDNSKNTL 79

Query: 180 HIDIRSLLELRID*LASNYCSRETLLHVSPPGPRWSICYYHQDL 49
           ++ + SL   R +     +C++     VS PGPRW   YY  D+
Sbjct: 80  YLQMNSL---RAEDTGVYFCAKGL---VSTPGPRW-YYYYAMDV 116


>DQ118267-1|AAZ94749.1|   79|Homo sapiens immunoglobulin heavy chain
           VDJ region protein.
          Length = 79

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = -3

Query: 267 LPGSGIGTGFPFAQRALFFIIFKNYKKTRHIDIRSLLELRID*LASNYCSRETLLHV 97
           + GSG  T +    +  F I   N K T H+ + SL   R++  A  YCS+++ +HV
Sbjct: 15  ISGSGDSTYYTNLAKGRFXISRDNSKNTVHLQMNSL---RVEDTAIYYCSKDSGMHV 68


>AM079884-1|CAL04030.1|  101|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 101

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = -3

Query: 354 LSAASSGH-FGLPRRTLVFKDEGTIIETVP-LPGSGIGTGFPFAQRALFFIIFKNYKKTR 181
           LS A+SG  FG    + V +  G  +E V  + GSG  T +  + +  F I   NYK T 
Sbjct: 23  LSCAASGFTFGTFAMSWVRQAPGKGLERVSAISGSGGSTFYADSVKGRFTISRDNYKNTL 82

Query: 180 HIDIRSLLELRID*LASNYCSR 115
           H+ + S   LR +  A  +C+R
Sbjct: 83  HLQMNS---LRAEDTAVYHCAR 101


>BC112034-1|AAI12035.1|  157|Homo sapiens hypothetical protein
           LOC284009 protein.
          Length = 157

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -3

Query: 123 CSRETLLHVSPPGPRWSICYYHQDLHR-RRLQAGSRPRPF 7
           C R  ++H+   G RW      +  HR RR   GSRP PF
Sbjct: 40  CGRPAVVHIGGEGARWEKGARGRKEHRLRRSDLGSRPVPF 79


>BC093711-1|AAH93711.1|  157|Homo sapiens hypothetical protein
           LOC284009 protein.
          Length = 157

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -3

Query: 123 CSRETLLHVSPPGPRWSICYYHQDLHR-RRLQAGSRPRPF 7
           C R  ++H+   G RW      +  HR RR   GSRP PF
Sbjct: 40  CGRPAVVHIGGEGARWEKGARGRKEHRLRRSDLGSRPVPF 79


>AM079202-1|CAL03348.1|  101|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 101

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = -3

Query: 354 LSAASSGH-FGLPRRTLVFKDEGTIIETVP-LPGSGIGTGFPFAQRALFFIIFKNYKKTR 181
           LS A+SG  F     T V +  G  +E +  + GSGIGT +  + +  F I   N K T 
Sbjct: 23  LSCAASGFTFSNYAMTWVRQAPGKGLEWISAISGSGIGTYYADSVKGRFTISRDNSKNTL 82

Query: 180 HIDIRSLLELRID*LASNYCSR 115
           ++ + S   LR +  A  YC++
Sbjct: 83  YLQVNS---LRAEDTAVYYCAQ 101


>AK125693-1|BAC86247.1|  321|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43705 fis, clone TESOP2001818. ).
          Length = 321

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 248 PIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAER 355
           P+P  G+ T   ++PS+L+ ++  G P W ED+  R
Sbjct: 228 PLPPKGTETFFCVLPSALRAALSCG-PSWGEDSGPR 262


>AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant
           protein.
          Length = 1264

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -2

Query: 493 PEFSRSAESIRTPPQMRCSSRSEPYLPSIGXPWNSNAQAEKKTLPGPLGG 344
           P +  +A S  +P Q+  S R EP LP  G   ++ AQ       GPL G
Sbjct: 89  PSWPLNARSSSSPTQLGNSRRGEPTLPESGFRDSAGAQPNGSGGAGPLCG 138


>AM079105-1|CAL03251.1|  101|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 101

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = -3

Query: 354 LSAASSGH-FGLPRRTLVFKDEGTIIETVP-LPGSGIGTGFPFAQRALFFIIFKNYKKTR 181
           LS A+SG  F     + V +  G  +E V  + GSG  T +  + R  F I   N+K T 
Sbjct: 23  LSCAASGFTFTTSGMSWVRQAPGKGLEWVSGISGSGPTTNYGDSVRGRFTISRDNHKNTL 82

Query: 180 HIDIRSLLELRID*LASNYCSR 115
           H+ + S   LR++  A  YC++
Sbjct: 83  HLQMDS---LRVEDTAVCYCAK 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,247,825
Number of Sequences: 237096
Number of extensions: 2832224
Number of successful extensions: 9743
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9740
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)