BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_G11
(845 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 374 e-104
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 363 e-101
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 324 7e-90
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 319 3e-88
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 255 5e-69
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 142 4e-35
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 109 4e-25
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 79 1e-15
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 30 0.36
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.83
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 1.1
SPBP18G5.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 7.7
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 7.7
SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 26 7.7
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 7.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 374 bits (919), Expect = e-104
Identities = 176/216 (81%), Positives = 196/216 (90%)
Frame = +3
Query: 105 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 284
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 285 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 464
TIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLM 123
Query: 465 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 644
KM+ETAEAYLG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 124 KMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183
Query: 645 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKS 752
D+ GE NVLIFDLGGGTFDVS+LTIE+GIFEVK+
Sbjct: 184 DRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFEVKA 219
Score = 35.5 bits (78), Expect = 0.010
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +1
Query: 769 LGGEDFDNRMVNHFVXE 819
LGGEDFD+R+VNHF+ E
Sbjct: 226 LGGEDFDSRLVNHFIQE 242
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 363 bits (892), Expect = e-101
Identities = 171/216 (79%), Positives = 193/216 (89%)
Frame = +3
Query: 105 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 284
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 285 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 464
TIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLL 123
Query: 465 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 644
KM+E+AEA+LG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 124 KMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183
Query: 645 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKS 752
D+ E NVLIFDLGGGTFDVS+LTIE+GIFEVK+
Sbjct: 184 DRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFEVKA 219
Score = 34.3 bits (75), Expect = 0.022
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 769 LGGEDFDNRMVNHFVXE 819
LGGEDFD+R+VNHF E
Sbjct: 226 LGGEDFDSRLVNHFAQE 242
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 324 bits (797), Expect = 7e-90
Identities = 153/214 (71%), Positives = 178/214 (83%)
Frame = +3
Query: 105 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 284
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 285 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 464
T+FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+MVLT
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLT 127
Query: 465 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 644
KMKE +EA L K V+ AVITVPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 128 KMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGL 187
Query: 645 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEV 746
D K +NVLIFDLGGGTFDVS+L I+ G+FEV
Sbjct: 188 DAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFEV 221
Score = 32.7 bits (71), Expect = 0.067
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 769 LGGEDFDNRMVNHFVXE 819
LGGEDFDN +V HF+ E
Sbjct: 230 LGGEDFDNALVEHFIQE 246
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 319 bits (784), Expect = 3e-88
Identities = 145/213 (68%), Positives = 185/213 (86%)
Frame = +3
Query: 108 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 287
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 288 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 467
IFD KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M+L+K
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSK 157
Query: 468 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 647
MK+TAEAYLGK V +AV+TVPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLD
Sbjct: 158 MKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLD 217
Query: 648 KKGTGERNVLIFDLGGGTFDVSILTIEDGIFEV 746
K T E++++++DLGGGTFDVS+L+I++G+FEV
Sbjct: 218 KTDT-EKHIVVYDLGGGTFDVSLLSIDNGVFEV 249
Score = 29.1 bits (62), Expect = 0.83
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +1
Query: 769 LGGEDFDNRMVNH 807
LGGEDFDNR++N+
Sbjct: 258 LGGEDFDNRVINY 270
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 255 bits (625), Expect = 5e-69
Identities = 123/220 (55%), Positives = 160/220 (72%), Gaps = 1/220 (0%)
Frame = +3
Query: 96 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 272
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 273 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 452
NP NT F KRLIGR+F++ VQ D+K P+++V + KT+ P ++
Sbjct: 109 NPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGG 165
Query: 453 MVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAI 632
+L+KM+ETA YLGK V+NAV+TVPAYFNDSQRQATK AG I+GLNVLR++NEPTAAA+
Sbjct: 166 FILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAAL 225
Query: 633 AYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKS 752
AYGLDKK + V +FDLGGGTFD+SIL + +G+FEV+S
Sbjct: 226 AYGLDKK--NDAIVAVFDLGGGTFDISILELNNGVFEVRS 263
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 142 bits (345), Expect = 4e-35
Identities = 79/225 (35%), Positives = 126/225 (56%), Gaps = 5/225 (2%)
Frame = +3
Query: 93 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 272
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 273 NPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 449
N NT+ KRL GR ++D ++ + ++ G KV Y E+ F ++
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLI 122
Query: 450 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 629
+ TK+K AEA L +V + VI++PA+F D QR+A +A I+GLN LR++N+ AAA
Sbjct: 123 AAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAA 182
Query: 630 IAYGLDKKGTGE----RNVLIFDLGGGTFDVSILTIEDGIFEVKS 752
+ YG+ K E R V I D G + VSI+ G F +KS
Sbjct: 183 LTYGITKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRGQFHIKS 227
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 109 bits (263), Expect = 4e-25
Identities = 58/219 (26%), Positives = 119/219 (54%), Gaps = 6/219 (2%)
Frame = +3
Query: 108 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 287
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 288 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGED------KTFFPEEVS 449
+ + + L+G+ ++ T+ H+ V+ G+ K+ + ++ K E S
Sbjct: 87 VTNFRDLLGKSHDELTLHHC--HYSANPVNVEGQIGFKITVQEDEESDPKEKILTAHEAS 144
Query: 450 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 629
L ++ E+AE +LG V V++VP YF D+QR+A + A +GL VL++I++P A
Sbjct: 145 VRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVI 204
Query: 630 IAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEV 746
+A ++ ++ V++ + G +VS+++++ G+ +
Sbjct: 205 LALMYSEEVLIDKTVVVANFGATRSEVSVVSVKGGLMTI 243
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 78.6 bits (185), Expect = 1e-15
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 4/211 (1%)
Frame = +3
Query: 108 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 284
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P +
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 285 TIFDAKRLIGRK-FEDATVQADMKHWPFEVVSDGGKPKIKVAYK-GEDKTFFPEEVSSMV 458
+I + K L+ E VQ +P + + + +++ +++ + EE+ +M
Sbjct: 85 SIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEEIIAMT 144
Query: 459 LTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAY 638
+ AE + + + V+TVP +FN+ QR +A I +VL +I++ A AI Y
Sbjct: 145 MEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEY 204
Query: 639 GLDKK-GTGERNVLIFDLGGGTFDVSILTIE 728
L + T +I+D G G+ ++++ +
Sbjct: 205 SLSRSFSTDPTYNIIYDSGSGSTSATVISFD 235
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 30.3 bits (65), Expect = 0.36
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +3
Query: 213 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKP 392
+ F+D E GD A + P + AK L+G+ + + D P++V+ D P
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184
Query: 393 KIKVAYKGEDKTFFPE 440
+K+ G + F +
Sbjct: 185 -LKLMIDGTVRNFIAQ 199
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.1 bits (62), Expect = 0.83
Identities = 33/155 (21%), Positives = 64/155 (41%)
Frame = -2
Query: 784 SPHLPSGVAGGDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP*AIAAAVGSLM 605
S +P+ + DF+S I + + +S +P S +S+ S S P + + ++ S
Sbjct: 542 SSSIPTS-SSSDFSSSITTISSGISSSSIPSTFSSVSSILSSST--SSPSSTSLSISSSS 598
Query: 604 IRRTFKPEMVPASFVACL*ESLKYAGTVITAFCTVLPR*ASAVSFIFVSTMELTSSGKKV 425
TF S + I++ T+L + S + +S+ + S +
Sbjct: 599 TSSTFSSAST---------SSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSI 649
Query: 424 LSSPLYATLILGLPPSLTTSKGQCFMSACTVASSN 320
LSS + + + SL+T S+ T+ SS+
Sbjct: 650 LSSSIST---IPISSSLSTYSSSVIPSSSTLVSSS 681
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 100 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 195
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPBP18G5.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 430
Score = 25.8 bits (54), Expect = 7.7
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = -2
Query: 784 SPHLPSGVAGGDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP*AIAAAVGSLM 605
S +PS DFTSK+ + + + + S I T SP LS + A+ S +
Sbjct: 316 STTIPSDEENEDFTSKVDAMEIHSGSLPLNIDSSPIFTNHSPSSSLSSESSFEASPSSFV 375
Query: 604 IRR 596
R+
Sbjct: 376 DRK 378
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.8 bits (54), Expect = 7.7
Identities = 22/81 (27%), Positives = 33/81 (40%)
Frame = -2
Query: 808 SG*PCDCQSPHLPSGVAGGDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP*AI 629
+G P +P +P + ++P S+ +PPP + T SP RP I
Sbjct: 221 AGTPTSTSAPPIPPSIPSSRPPERVP-SLSAPAPPPIPPPSN--GTVSSPPNSPPRP--I 275
Query: 628 AAAVGSLMIRRTFKPEMVPAS 566
A + I T KP + P S
Sbjct: 276 APVSMNPAINSTSKPPLPPPS 296
>SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 25.8 bits (54), Expect = 7.7
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 657 TGERNVLIFDLGGGTFDVSILTIE-DGIFEVKSPPA 761
TG+ + ++ +GG T D+ ++ I G + K P A
Sbjct: 265 TGDGHKMVMSIGGSTVDLDLVQIHPTGFVDPKDPTA 300
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 7.7
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -3
Query: 186 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 28
G W SP S + H ++++ +F +RVL C+ L K +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,486,182
Number of Sequences: 5004
Number of extensions: 73809
Number of successful extensions: 241
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 418457710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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