Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_G10
         (832 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   8.0  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    22   8.0  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   8.0  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   8.0  

>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 10  PHPTRGRSARPYSRPRPTR 66
           PHP   R A+P ++P   R
Sbjct: 251 PHPRLRREAKPEAKPGNNR 269


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 392 YLTSSCPSTCGPT 354
           Y+T++ PS CG T
Sbjct: 13  YITAAFPSACGKT 25


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 420 CVILSSNPVLCSPXT 464
           C++ +S  +LC P T
Sbjct: 139 CIVFNSGTILCVPFT 153


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 649 RSGSNILHGLLFGRRISTYGSDVVSFTEMEPEERVDPM 762
           R+G N +        +S   SDVV+FTE+    R+ PM
Sbjct: 408 RNGENPIDTCEMFDSVSILFSDVVTFTEI--CSRITPM 443


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,397
Number of Sequences: 438
Number of extensions: 5523
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)