Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_F23
         (993 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    28   0.38 
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.7  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    24   8.1  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 28.3 bits (60), Expect = 0.38
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +1

Query: 160 YRSVNKTIKSSNQLPMSSSYDLFKTYPEFNEISNQ-ISQNVAQQSNELIGTEQPAVKLKC 336
           Y  +  T  +S +L          T    N+IS + I  +VA+ + EL+G E     L C
Sbjct: 548 YSVITDTDTTSKKLLQKGQLQTRTTMIPLNKISGRKIDPSVARFAEELVGKENVTTALSC 607

Query: 337 EDFTSNIEK 363
             +   +++
Sbjct: 608 ISYDPEVDQ 616


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 25.4 bits (53), Expect = 2.7
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -1

Query: 708 WYEAHIQQLRLLVYKMXKPKA*CCLVCL-NFGHPQILRIINCILESKL 568
           W+ AH  QLR  V      K    + CL + GHP+IL +    LE K+
Sbjct: 723 WF-AH--QLREAVKAGDSVKVQVYIRCLGHLGHPEILNVFEPYLEGKI 767


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 8.1
 Identities = 16/74 (21%), Positives = 30/74 (40%)
 Frame = +1

Query: 94  NSALNPDAPEFYPHLAAVTQEGYRSVNKTIKSSNQLPMSSSYDLFKTYPEFNEISNQISQ 273
           +++L   A  F   L   +     S++ + ++S+    SSS       P    +  Q  Q
Sbjct: 19  SASLRSSAANFAAWLRGNSGSPLSSISSSSRNSSSCNNSSSSGTHSDRPVAGMLQQQQQQ 78

Query: 274 NVAQQSNELIGTEQ 315
               Q   ++GT+Q
Sbjct: 79  QRQPQRQAVVGTQQ 92


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.312    0.129    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,000
Number of Sequences: 2352
Number of extensions: 14293
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 108941235
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)