Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_F21
         (864 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like ...    34   0.11 
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    34   0.15 
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    34   0.15 
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    32   0.61 
AF039044-4|AAG24122.3|  328|Caenorhabditis elegans Serpentine re...    31   1.4  
AF098987-7|AAC67430.1|  310|Caenorhabditis elegans Forkhead tran...    29   4.3  
U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    28   7.5  
U41557-6|AAA83307.1|  589|Caenorhabditis elegans Collagen sequen...    28   7.5  
Z31590-5|CAA83462.1|  245|Caenorhabditis elegans Hypothetical pr...    28   9.9  

>AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like
           protease protein 7 protein.
          Length = 522

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +2

Query: 494 GEDAKRAEFPFMALLGFGASAXEAXWLCGGSVLSARYILTAAHCIS 631
           G DA ++E P+       +   ++   C G+++S R+IL A HC +
Sbjct: 166 GRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHCFA 211


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +2

Query: 488 VGGEDAKRAEFPFMALLGFGASAXEAXWLCGGSVLSARYILTAAHCISE 634
           VGG +     FP+ A L   A+       CG S+L   +++TAAHC  E
Sbjct: 28  VGGFETVPGAFPWTAALRNKATKAHH---CGASILDKTHLITAAHCFEE 73


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +2

Query: 575 CGGSVLSARYILTAAHCISEPRLGPLKYA 661
           CGGS++   ++LTAAHC ++ R  P  Y+
Sbjct: 84  CGGSLIDPNFVLTAAHCFAKDR-RPTSYS 111


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 9/21 (42%), Positives = 18/21 (85%)
 Frame = +2

Query: 572 LCGGSVLSARYILTAAHCISE 634
           +CGG++++ +++LTAAHC  +
Sbjct: 61  ICGGTLITLKHVLTAAHCFQK 81


>AF039044-4|AAG24122.3|  328|Caenorhabditis elegans Serpentine
           receptor, class t protein17 protein.
          Length = 328

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = -3

Query: 436 SFVKIKRHGTSTKILRYVQNVIDTSVPRFFICFFESAVSPRQVYV-IDVVHELTVGAAHD 260
           S+V +K+  +     +  ++ +   +  FF CFF +  S   VY+ I  V+++ +  AH 
Sbjct: 230 SYVYLKKSKSGNSSTKLTKSQLSILLQTFFFCFFHAVTSLIYVYMDIFQVYDMLIFIAHF 289

Query: 259 G 257
           G
Sbjct: 290 G 290


>AF098987-7|AAC67430.1|  310|Caenorhabditis elegans Forkhead
           transcription factor familyprotein 8 protein.
          Length = 310

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +2

Query: 302 NIYLTRRYSRLEKT--NKKSWDACIDYVLNIPEYFCTSTVTFN 424
           N+ L +++SR+EKT  +++ W  C+D     P     S V  N
Sbjct: 108 NLSLNKQFSRIEKTDGDRRGWWVCVDPPAKKPRILKGSPVRVN 150


>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 575 CGGSVLSARYILTAAHC 625
           C G++ S R+ILTA HC
Sbjct: 75  CSGTLTSPRHILTATHC 91


>U41557-6|AAA83307.1|  589|Caenorhabditis elegans Collagen sequence
           x-hybridizingprotein 1 protein.
          Length = 589

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = -1

Query: 246 RSPHTGGNDLXPVVQDERLAALAKHARAVEPAADTRGPFDISRGSPVPGG 97
           RSPH+   +         L     H+    P+    GPFD S G+P  GG
Sbjct: 117 RSPHSDAPEPSAATDGFELVFGKHHSTGAPPSGGPPGPFDPS-GAPPSGG 165


>Z31590-5|CAA83462.1|  245|Caenorhabditis elegans Hypothetical
           protein R01H10.4 protein.
          Length = 245

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
 Frame = -2

Query: 332 VGCISSSGICYRCC-PRAHSRCSTRWA--PCRAART 234
           + CIS SG CY CC P   + C  +    PC   +T
Sbjct: 184 LSCISISGKCYCCCAPYTPNPCDAQCTLHPCSRRQT 219


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,374,801
Number of Sequences: 27780
Number of extensions: 265201
Number of successful extensions: 761
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)