Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_F19
(848 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 189 2e-48
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 189 2e-48
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 189 2e-48
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 187 8e-48
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 170 1e-42
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 167 9e-42
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 167 9e-42
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 166 2e-41
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 166 2e-41
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 166 2e-41
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 163 2e-40
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 163 2e-40
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 157 1e-38
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 151 5e-37
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 129 2e-30
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 113 2e-25
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 89 4e-18
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 89 4e-18
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 89 4e-18
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 88 9e-18
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 87 1e-17
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 83 3e-16
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 77 2e-14
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 77 2e-14
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 55 7e-08
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 55 7e-08
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.59
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 31 0.78
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 31 0.78
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 31 0.78
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 31 0.78
AC006776-6|AAF60624.1| 356|Caenorhabditis elegans Serpentine re... 31 1.4
U61235-1|AAB17540.1| 485|Caenorhabditis elegans ZK protein. 29 3.2
U21308-4|AAB93321.1| 484|Caenorhabditis elegans Warthog (hedgeh... 29 3.2
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 4.2
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 4.2
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 4.2
Z83227-2|CAB05727.1| 270|Caenorhabditis elegans Hypothetical pr... 28 9.6
U41277-2|AAA82473.1| 274|Caenorhabditis elegans Hypothetical pr... 28 9.6
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 189 bits (461), Expect = 2e-48
Identities = 80/96 (83%), Positives = 91/96 (94%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITDR 389
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLIT +
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGK 96
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 189 bits (461), Expect = 2e-48
Identities = 80/96 (83%), Positives = 91/96 (94%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITDR 389
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLIT +
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGK 96
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 189 bits (461), Expect = 2e-48
Identities = 80/96 (83%), Positives = 91/96 (94%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITDR 389
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLIT +
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGK 96
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 187 bits (456), Expect = 8e-48
Identities = 79/95 (83%), Positives = 90/95 (94%)
Frame = +3
Query: 105 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 284
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 285 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITDR 389
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLIT +
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGK 95
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 170 bits (413), Expect = 1e-42
Identities = 73/96 (76%), Positives = 84/96 (87%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITDR 389
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+ +
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGK 96
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 167 bits (406), Expect = 9e-42
Identities = 73/96 (76%), Positives = 86/96 (89%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITDR 389
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+IT +
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGK 94
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 167 bits (406), Expect = 9e-42
Identities = 73/96 (76%), Positives = 86/96 (89%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITDR 389
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+IT +
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGK 94
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 166 bits (404), Expect = 2e-41
Identities = 71/97 (73%), Positives = 84/97 (86%)
Frame = +3
Query: 99 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 278
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 279 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITDR 389
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+T +
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGK 101
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 166 bits (403), Expect = 2e-41
Identities = 72/96 (75%), Positives = 86/96 (89%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITDR 389
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+IT +
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGK 94
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 166 bits (403), Expect = 2e-41
Identities = 72/96 (75%), Positives = 86/96 (89%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITDR 389
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+IT +
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGK 94
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 163 bits (395), Expect = 2e-40
Identities = 71/96 (73%), Positives = 85/96 (88%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITDR 389
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+IT +
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGK 94
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 163 bits (395), Expect = 2e-40
Identities = 71/96 (73%), Positives = 85/96 (88%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITDR 389
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+IT +
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGK 94
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 157 bits (380), Expect = 1e-38
Identities = 69/95 (72%), Positives = 78/95 (82%)
Frame = +3
Query: 105 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 284
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 285 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITDR 389
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++ +
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGK 102
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 151 bits (367), Expect = 5e-37
Identities = 67/96 (69%), Positives = 78/96 (81%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITDR 389
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++T +
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGK 93
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 129 bits (312), Expect = 2e-30
Identities = 54/95 (56%), Positives = 70/95 (73%)
Frame = +3
Query: 105 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 284
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 285 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITDR 389
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I +
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGK 99
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 113 bits (271), Expect = 2e-25
Identities = 49/74 (66%), Positives = 58/74 (78%)
Frame = +3
Query: 168 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 347
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 348 YRQLFHPEQLITDR 389
YR LFHPEQL++ +
Sbjct: 61 YRSLFHPEQLLSGK 74
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 89.0 bits (211), Expect = 4e-18
Identities = 42/93 (45%), Positives = 56/93 (60%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 380
+VPRAV VDLEP +D VR+G + QLF P+ +
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFV 91
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 89.0 bits (211), Expect = 4e-18
Identities = 41/93 (44%), Positives = 57/93 (61%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 380
+VPRAV VDLEP +D VR+G + QLF P+ +
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYV 91
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 89.0 bits (211), Expect = 4e-18
Identities = 41/93 (44%), Positives = 57/93 (61%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 380
+VPRAV VDLEP +D VR+G + QLF P+ +
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYV 91
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 87.8 bits (208), Expect = 9e-18
Identities = 41/93 (44%), Positives = 57/93 (61%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 380
+VPRAV VDLEP +D VR+G + QLF P+ +
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFV 91
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 87.4 bits (207), Expect = 1e-17
Identities = 41/93 (44%), Positives = 57/93 (61%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 380
+VPRAV VDLEP +D VR+G + QLF P+ +
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFV 91
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/93 (41%), Positives = 52/93 (55%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 380
+VPRA VDLEP +D VR G + QLF P+ +
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFV 91
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 76.6 bits (180), Expect = 2e-14
Identities = 38/94 (40%), Positives = 54/94 (57%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIT 383
+VPRA+ VDL+P ++ VR+ Y +LF PE ++
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVS 92
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 76.6 bits (180), Expect = 2e-14
Identities = 38/94 (40%), Positives = 54/94 (57%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIT 383
+VPRA+ VDL+P ++ VR+ Y +LF PE ++
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVS 92
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 54.8 bits (126), Expect = 7e-08
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +3
Query: 114 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 293
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 294 AVFVDLEPTVVD-EVRTGTYRQLFHPEQL 377
AV VDLEP V++ +++ + LF+ + +
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNI 93
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 54.8 bits (126), Expect = 7e-08
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +3
Query: 114 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 293
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 294 AVFVDLEPTVVD-EVRTGTYRQLFHPEQL 377
AV VDLEP V++ +++ + LF+ + +
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNI 93
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.59
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 130 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 285
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 31.5 bits (68), Expect = 0.78
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -1
Query: 515 AEIGKIPYKSKE*TEIGLSVVPVWNKSPLLRTWTPTSKGEKPSISN 378
A++ K+P K+ + EI + P +P T TP S+GEK + S+
Sbjct: 830 ADLPKVPSKTNDDNEITTTSAPAAVTNPWGETETPLSEGEKTTTSS 875
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 31.5 bits (68), Expect = 0.78
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -1
Query: 515 AEIGKIPYKSKE*TEIGLSVVPVWNKSPLLRTWTPTSKGEKPSISN 378
A++ K+P K+ + EI + P +P T TP S+GEK + S+
Sbjct: 830 ADLPKVPSKTNDDNEITTTSAPAAVTNPWGETETPLSEGEKTTTSS 875
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 31.5 bits (68), Expect = 0.78
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -1
Query: 515 AEIGKIPYKSKE*TEIGLSVVPVWNKSPLLRTWTPTSKGEKPSISN 378
A++ K+P K+ + EI + P +P T TP S+GEK + S+
Sbjct: 830 ADLPKVPSKTNDDNEITTTSAPAAVTNPWGETETPLSEGEKTTTSS 875
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 31.5 bits (68), Expect = 0.78
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -1
Query: 515 AEIGKIPYKSKE*TEIGLSVVPVWNKSPLLRTWTPTSKGEKPSISN 378
A++ K+P K+ + EI + P +P T TP S+GEK + S+
Sbjct: 830 ADLPKVPSKTNDDNEITTTSAPAAVTNPWGETETPLSEGEKTTTSS 875
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 31.5 bits (68), Expect = 0.78
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -1
Query: 515 AEIGKIPYKSKE*TEIGLSVVPVWNKSPLLRTWTPTSKGEKPSISN 378
A++ K+P K+ + EI + P +P T TP S+GEK + S+
Sbjct: 830 ADLPKVPSKTNDDNEITTTSAPAAVTNPWGETETPLSEGEKTTTSS 875
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 31.5 bits (68), Expect = 0.78
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -1
Query: 515 AEIGKIPYKSKE*TEIGLSVVPVWNKSPLLRTWTPTSKGEKPSISN 378
A++ K+P K+ + EI + P +P T TP S+GEK + S+
Sbjct: 830 ADLPKVPSKTNDDNEITTTSAPAAVTNPWGETETPLSEGEKTTTSS 875
>AC006776-6|AAF60624.1| 356|Caenorhabditis elegans Serpentine
receptor, class w protein99 protein.
Length = 356
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 431 LLRTWTPTSKGEKPSISNKLFWMKQLSVCASADLINNSRFKIDEDST 291
+L++ T SK KP + KLF + Q V A+ L+ RF++ ED T
Sbjct: 126 ILKSLTDRSKFAKPKVGWKLFIVVQ-CVSATLSLVYQLRFQVLEDRT 171
>U61235-1|AAB17540.1| 485|Caenorhabditis elegans ZK protein.
Length = 485
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = +2
Query: 347 IQTVVSSRTTYY**TVFRPLTLESTFLIVD----SCSKLEQHSTLSRSIL 484
+ T +S ++T+Y V+ P+T E+ LIVD SC + + +TLS + L
Sbjct: 395 VMTTISEKSTFYETGVYAPMT-ETGDLIVDDVYASCHNVVKANTLSHTFL 443
>U21308-4|AAB93321.1| 484|Caenorhabditis elegans Warthog
(hedgehog-like family)protein 1 protein.
Length = 484
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = +2
Query: 347 IQTVVSSRTTYY**TVFRPLTLESTFLIVD----SCSKLEQHSTLSRSIL 484
+ T +S ++T+Y V+ P+T E+ LIVD SC + + +TLS + L
Sbjct: 394 VMTTISEKSTFYETGVYAPMT-ETGDLIVDDVYASCHNVVKANTLSHTFL 442
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 144 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 323
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 324 VDE 332
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 144 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 323
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 324 VDE 332
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 144 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 323
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 324 VDE 332
DE
Sbjct: 116 ADE 118
>Z83227-2|CAB05727.1| 270|Caenorhabditis elegans Hypothetical
protein F45B8.2 protein.
Length = 270
Score = 27.9 bits (59), Expect = 9.6
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Frame = -1
Query: 461 SVVPVWNKS---PLLRTWTPTSKGE-KPSISNKLFWMKQLSVCASADLINNSRFKIDEDS 294
SV+P+WNK+ L W P +K + P N L +++++ ++ + ++ I
Sbjct: 54 SVIPLWNKTFPCRLATEWNPKNKKDAPPKKKNALVILERVASRSNQNAVSRV-INILRSK 112
Query: 293 TGYVLASSG--LAEESVERIVSTPDGLVCGHLAIRL 192
+ +SS + E VER +P+ L L
Sbjct: 113 VHLMFSSSNELPSSEDVERWKKSPETLAASEYGCNL 148
>U41277-2|AAA82473.1| 274|Caenorhabditis elegans Hypothetical
protein C06E4.6 protein.
Length = 274
Score = 27.9 bits (59), Expect = 9.6
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = -1
Query: 413 PTSKGEKPSISNKLFWMKQLSVCASADLINNS-RFKIDED---STGYVLASSGL-AEESV 249
P ++ P S+ + Q S CA+ DLI+ R + + STG+ A+ GL A+ESV
Sbjct: 153 PAAQPASPYYSSAKAALDQYSRCAAIDLISEGIRINVVQPGFVSTGFSTAARGLSADESV 212
Query: 248 E 246
+
Sbjct: 213 K 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,132,722
Number of Sequences: 27780
Number of extensions: 308677
Number of successful extensions: 742
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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