Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_F13
(849 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 384 e-108
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 217 2e-57
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 210 1e-55
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 153 4e-38
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 91 1e-19
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 89 7e-19
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 83 5e-17
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 68 1e-12
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 66 8e-12
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 38 0.002
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.12
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.12
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.63
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.5
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 3.4
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 3.4
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 5.9
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 5.9
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 26 5.9
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 26 7.8
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 26 7.8
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 7.8
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 26 7.8
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 384 bits (946), Expect = e-108
Identities = 183/220 (83%), Positives = 191/220 (86%), Gaps = 1/220 (0%)
Frame = +3
Query: 192 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 371
P IVGRPRH G+MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFY
Sbjct: 32 PSIVGRPRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFY 91
Query: 372 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 551
NELRVAPEEHP LLTEAPLNPK+NREKMTQI+FETFN PA YVAIQAVLSLYASGRTTGI
Sbjct: 92 NELRVAPEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGI 151
Query: 552 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 731
VLDSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKIL ERGY+F+TTAEREIVRD
Sbjct: 152 VLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILMERGYTFSTTAEREIVRD 211
Query: 732 IKXXLCYVALDFXQXM-XXXHXXXPSXXLXXXDGQVXXIG 848
IK LCYVALDF Q + DGQV IG
Sbjct: 212 IKEKLCYVALDFEQELQTAAQSSSLEKSYELPDGQVITIG 251
Score = 69.3 bits (162), Expect = 6e-13
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +2
Query: 101 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 208
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPS G+
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGR 37
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 217 bits (529), Expect = 2e-57
Identities = 99/193 (51%), Positives = 139/193 (72%), Gaps = 1/193 (0%)
Frame = +3
Query: 192 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 371
P VGR +H+ VM QKD +VG EAQ+ RG+L ++ PIE GI+ NW DME+IW + +
Sbjct: 36 PTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYS 95
Query: 372 NE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 548
++ L PEEHP+LLTE PL N+EK+ + +ET N PA+ ++Q VL+LYAS RTTG
Sbjct: 96 DQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSLQPVLALYASARTTG 155
Query: 549 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 728
IVL+ GDG++H+VPIY+G+++P AI + ++ GRD+TDYL L + G+ ++AE+EIVR
Sbjct: 156 IVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVR 215
Query: 729 DIKXXLCYVALDF 767
+IK CYVA DF
Sbjct: 216 EIKEKCCYVASDF 228
Score = 44.0 bits (99), Expect = 3e-05
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 208
+ +DNGSG KAGFAGDD P+ +FP+ G+
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGR 41
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 210 bits (514), Expect = 1e-55
Identities = 97/193 (50%), Positives = 138/193 (71%), Gaps = 2/193 (1%)
Frame = +3
Query: 192 PRIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHT 365
P IVGRP R + + KD VGDEA++ R +L +KYP+E+GI+ ++++M ++W +T
Sbjct: 30 PSIVGRPILRAEEKTGNVQIKDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYT 89
Query: 366 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 545
F+ +L++ P +LLTE P+NP ANREKM + MFE + +YVAIQAVLSLYA G ++
Sbjct: 90 FFEKLKIDPRGRKILLTEPPMNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSS 149
Query: 546 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 725
G+V+DSGDGV+H VP+YE L H + RLD+AGRD T YL+ +L +GY+F TA+ E V
Sbjct: 150 GVVVDSGDGVTHIVPVYESVVLNHLVGRLDVAGRDATRYLISLLLRKGYAFNRTADFETV 209
Query: 726 RDIKXXLCYVALD 764
R++K LCYV+ D
Sbjct: 210 REMKEKLCYVSYD 222
Score = 38.3 bits (85), Expect = 0.001
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2
Query: 107 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 208
E A +V+DNG+G K G+A D+ PR FPS G+
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGR 35
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 153 bits (370), Expect = 4e-38
Identities = 81/183 (44%), Positives = 110/183 (60%), Gaps = 11/183 (6%)
Frame = +3
Query: 249 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 425
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H LLTE P
Sbjct: 73 DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPP 132
Query: 426 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSH 581
LNP NRE +IMFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H
Sbjct: 133 LNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTH 192
Query: 582 TVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY--SFTTTAEREIVRDIKXXLCYV 755
+P+ EGY + +I + LAGRD+T ++ +L +R S TAER IK CYV
Sbjct: 193 IIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER-----IKEECCYV 247
Query: 756 ALD 764
D
Sbjct: 248 CPD 250
Score = 38.3 bits (85), Expect = 0.001
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDAPRAVFPS 196
+++DNG+G K G+AG+DAP VFP+
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPT 33
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 91.5 bits (217), Expect = 1e-19
Identities = 49/180 (27%), Positives = 93/180 (51%), Gaps = 3/180 (1%)
Frame = +3
Query: 237 MGQKDSYVGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 413
+ + + VG++ + G ++ + P E +++NWD ME++ +TF +L + EHP+ +
Sbjct: 62 LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICM 120
Query: 414 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTV 587
TE NP R MT+++FE +N P++ I + S Y + + ++GIVL+ G+ SH +
Sbjct: 121 TEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVI 180
Query: 588 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXXLCYVALDF 767
P+ G + R+ G + YL+K+ + SF + C+V+ D+
Sbjct: 181 PVLNGERILSEAKRISWGGSQSSSYLLKLFQIKYPSFPIKMLPSQAELLMHDHCHVSSDY 240
Score = 30.7 bits (66), Expect = 0.27
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDAPRAVF 190
LV+DNGS +AG+ G+ P+ VF
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVF 50
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 89.0 bits (211), Expect = 7e-19
Identities = 44/134 (32%), Positives = 69/134 (51%)
Frame = +3
Query: 291 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 470
+ +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K + MF
Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMF 122
Query: 471 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 650
E+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L +G
Sbjct: 123 ESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSGNA 182
Query: 651 LTDYLMKILTERGY 692
+ D L + L ++ +
Sbjct: 183 INDILAQTLRDKNF 196
Score = 39.5 bits (88), Expect = 6e-04
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 208
+EV+A+V+D GS + GF+G+D P+ V PS G+
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGE 43
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 83.0 bits (196), Expect = 5e-17
Identities = 43/165 (26%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Frame = +3
Query: 210 PRHQGVMVGMGQKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 383
P + GV + ++ YV DE Q I + +K +GI+ +W+ W +L+
Sbjct: 37 PSYYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQ 96
Query: 384 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 563
V P E+ +++TE NP++ R+++ + FE + PA Y+ QAV +A+ ++T +++D
Sbjct: 97 VNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDI 156
Query: 564 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 698
G + P+ +G + I + LAG L + ++ F
Sbjct: 157 GSDNASVTPVVDGLIIRKGIFKQSLAGDFLNANIEQLFNTMNIEF 201
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSNRG-KAPPSGRD 229
EE+ +LV+D GS + G+AG+++P + PS G ++ +GR+
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYGVRSDVTGRN 50
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 68.1 bits (159), Expect = 1e-12
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Frame = +3
Query: 306 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 473
PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 474 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 653
P +A + ++ LYA G G+V+D G + PI +G + A +L L GR +
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGRYM 231
Query: 654 TDYLMKILTE 683
T +L +L E
Sbjct: 232 TQHLQNLLRE 241
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 65.7 bits (153), Expect = 8e-12
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 18/197 (9%)
Frame = +3
Query: 255 YVGDEAQSKRGILTLKYPIEH--GIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEA 422
++G+E + TL++ H G + +W +W N + P ++ +LLT+
Sbjct: 43 FLGNELANCNDFTTLQFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQP 102
Query: 423 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG--------------IVLD 560
+ Q++FE F A A L + G T +V+D
Sbjct: 103 VFTMPSIEHNTIQLVFEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVID 162
Query: 561 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKX 740
SG +H +P+ + A+ R+D+ G+ LT+YL ++++ R Y+ E IV +IK
Sbjct: 163 SGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNM--MEETYIVNEIKE 220
Query: 741 XLCYVALDFXQXMXXXH 791
+CYV+ +F + M H
Sbjct: 221 SVCYVSQNFKEDMEICH 237
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 37.5 bits (83), Expect = 0.002
Identities = 28/146 (19%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Frame = +3
Query: 297 LKYPIEHGIVTNWD---------DMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKA 440
L YPI+ G+ D D+ +I+ ++ + L++ + + V+ L +
Sbjct: 198 LFYPIKSGVFNESDYASSQQLLADIYEIFKYSITSLLQIPVSQLSQYSVIFIVPDLYDRV 257
Query: 441 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 620
EK+ I+F + + +++ + + +G + V+D G + + EG +P++
Sbjct: 258 YVEKILDILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNS 317
Query: 621 ILRLDLAGRDLTDYLMKILTERGYSF 698
++++ G D+T MK+L + +
Sbjct: 318 RIKINYGGDDITLLFMKLLMRSHFPY 343
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.9 bits (69), Expect = 0.12
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +3
Query: 366 FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 509
+Y L E+HP+LLT+ A L P+ + ++ +I ++ NTP + VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.12
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +1
Query: 490 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 624
P T+P P T PV P S P+ P P PS+ P PS
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Score = 27.1 bits (57), Expect = 3.4
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +1
Query: 487 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 624
PP +P P P VPP P+T P P PS P P+
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPP-----PSTAPPVPTPSAGLPPVPVPT 1233
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +1
Query: 487 PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPCPSTRDTHSPTPS 624
PP PS +P VPPV P+ P P PS P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137
Score = 25.8 bits (54), Expect = 7.8
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +1
Query: 487 PPCTSPSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTRDTHSPTPS 624
PP +PS +P VPPV P+ P P PS P PS
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPS 1214
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.5 bits (63), Expect = 0.63
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +1
Query: 466 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 624
C+ ++ PP T S S P VPP S T + PT ST SP P+
Sbjct: 172 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +1
Query: 466 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 624
C+ ++ PP T S S P VPP S T + PT ST +P P+
Sbjct: 115 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167
Score = 25.8 bits (54), Expect = 7.8
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +1
Query: 478 STRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 624
ST P T S S P VPP S T + PT ST SP P+
Sbjct: 232 STSIP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 280
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 511 PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 615
PC+ + PPV+C TP P C + H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 511 PCSRCTRPVVPPVSCWTPATVSPTPCPST 597
P SR T+P+ S +P VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 487 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 594
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 5.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 408 LLTEAPLNPKANREKMTQIMFETFN 482
+L APL+ + +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.2 bits (55), Expect = 5.9
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -1
Query: 252 SPSVPYRPSRPDGGAFPRFEGNTARGASSPAKPALHIPEP 133
+P VP P RP P R A AL +P+P
Sbjct: 538 APEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQP 577
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 26.2 bits (55), Expect = 5.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 273 VPHLLHKSPSVPYRPSRPDGGA 208
+ L+ K+PS PY SRP A
Sbjct: 306 IDQLISKAPSYPYSSSRPSASA 327
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.8 bits (54), Expect = 7.8
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = -1
Query: 282 FCSVPHLLHKSPSVPYRPSRPDGGAFPRFEGNTARGASSPAKPALHIPEPLSTTNAATSS 103
F S+P + K P+ P P + + A +S+P P P+ + ++TSS
Sbjct: 193 FSSLPLVSSKPTGTPFVPKSPPSSSPSTTNVSNASTSSAPINP--RAPQTRRESISSTSS 250
Query: 102 SH 97
H
Sbjct: 251 IH 252
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 146 TYRSHCLLPTRQLLRRTS*ISEI 78
TYR H +PT LL T +SEI
Sbjct: 168 TYRDHDAIPTATLLNPTLDVSEI 190
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 302 FEGQDTSFALCLISYIRVLLSHTDHHA 222
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 25.8 bits (54), Expect = 7.8
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 493 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 636
C +PS+ C + PV + T S TP P+T + +PTP+ T
Sbjct: 825 CYNPSQ--YGCDNGALGPVQS-SSTTSSITPTPTTTSSITPTPTTTST 869
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,342,680
Number of Sequences: 5004
Number of extensions: 76576
Number of successful extensions: 283
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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