Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_F11
         (842 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036187-1|AAH36187.1|  904|Homo sapiens serine/arginine repetit...    33   1.7  
AL445686-4|CAI14682.1|  904|Homo sapiens serine/arginine repetit...    33   1.7  
AL445648-3|CAH73090.1|  904|Homo sapiens serine/arginine repetit...    33   1.7  
AE006463-5|AAK61225.1|  321|Homo sapiens unknown protein.              31   6.9  

>BC036187-1|AAH36187.1|  904|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 904

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +1

Query: 601 KGRHQSRSWEPSSSKTESRYRARSRSVQARRCP 699
           K R ++RS  PS ++   R+R+RSRS   RR P
Sbjct: 283 KSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRP 315


>AL445686-4|CAI14682.1|  904|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 904

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +1

Query: 601 KGRHQSRSWEPSSSKTESRYRARSRSVQARRCP 699
           K R ++RS  PS ++   R+R+RSRS   RR P
Sbjct: 283 KSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRP 315


>AL445648-3|CAH73090.1|  904|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 904

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +1

Query: 601 KGRHQSRSWEPSSSKTESRYRARSRSVQARRCP 699
           K R ++RS  PS ++   R+R+RSRS   RR P
Sbjct: 283 KSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRP 315


>AE006463-5|AAK61225.1|  321|Homo sapiens unknown protein.
          Length = 321

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -2

Query: 676 TEISPDTCFPFCLTMAPKTGSGAFPSS 596
           TE  PDTC P C  + P+ G G    S
Sbjct: 195 TESGPDTCTPQCPAVPPRAGKGTLNGS 221


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,226,112
Number of Sequences: 237096
Number of extensions: 2777977
Number of successful extensions: 5813
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5719
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)