Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_F11
(842 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77657-1|CAB01144.1| 130|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z81581-14|CAH10785.1| 628|Caenorhabditis elegans Hypothetical p... 29 4.1
Z81581-12|CAB70244.3| 635|Caenorhabditis elegans Hypothetical p... 29 4.1
Z81581-2|CAD56595.1| 672|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z81581-1|CAD56594.1| 655|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z75534-2|CAA99825.4| 635|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z73972-3|CAA98259.1| 305|Caenorhabditis elegans Hypothetical pr... 29 5.5
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 29 5.5
U12964-2|AAL02498.1| 293|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z83226-2|CAB05723.1| 211|Caenorhabditis elegans Hypothetical pr... 28 9.5
AF016657-2|AAB93652.1| 366|Caenorhabditis elegans Hypothetical ... 28 9.5
>Z77657-1|CAB01144.1| 130|Caenorhabditis elegans Hypothetical
protein F08H9.2 protein.
Length = 130
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 598 KKGRHQSRSWEPSSSKTESRYRARSRSVQARRCPWRYS*TTSRPASMA 741
++ R +SRS S SK+ S RSRS ARR ++ RPAS A
Sbjct: 65 RQSRSRSRSRSRSRSKSRSTSSRRSRSRSARRVSFK----RGRPASFA 108
>Z81581-14|CAH10785.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -1
Query: 728 GRLVVQEYLHGQRRAWTDRDLARYLLSVLL 639
GRL+ +E LH +RR +DR LA ++ ++L
Sbjct: 202 GRLIRREILHEKRRHVSDRALAFAIMGIIL 231
>Z81581-12|CAB70244.3| 635|Caenorhabditis elegans Hypothetical
protein F08A10.1a protein.
Length = 635
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -1
Query: 728 GRLVVQEYLHGQRRAWTDRDLARYLLSVLL 639
GRL+ +E LH +RR +DR LA ++ ++L
Sbjct: 209 GRLIRREILHEKRRHVSDRALAFAIMGIIL 238
>Z81581-2|CAD56595.1| 672|Caenorhabditis elegans Hypothetical
protein F08A10.1c protein.
Length = 672
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -1
Query: 728 GRLVVQEYLHGQRRAWTDRDLARYLLSVLL 639
GRL+ +E LH +RR +DR LA ++ ++L
Sbjct: 229 GRLIRREILHEKRRHVSDRALAFAIMGIIL 258
>Z81581-1|CAD56594.1| 655|Caenorhabditis elegans Hypothetical
protein F08A10.1b protein.
Length = 655
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -1
Query: 728 GRLVVQEYLHGQRRAWTDRDLARYLLSVLL 639
GRL+ +E LH +RR +DR LA ++ ++L
Sbjct: 229 GRLIRREILHEKRRHVSDRALAFAIMGIIL 258
>Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -1
Query: 728 GRLVVQEYLHGQRRAWTDRDLARYLLSVLL 639
GRL+ +E LH +RR +DR LA ++ ++L
Sbjct: 202 GRLIRREILHEKRRHVSDRALAFAIMGIIL 231
>Z75534-2|CAA99825.4| 635|Caenorhabditis elegans Hypothetical
protein F08A10.1a protein.
Length = 635
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -1
Query: 728 GRLVVQEYLHGQRRAWTDRDLARYLLSVLL 639
GRL+ +E LH +RR +DR LA ++ ++L
Sbjct: 209 GRLIRREILHEKRRHVSDRALAFAIMGIIL 238
>Z73972-3|CAA98259.1| 305|Caenorhabditis elegans Hypothetical
protein F15H10.6 protein.
Length = 305
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 422 IRQSNVLPQHID*RSEREPRGYLRPLRLKREAPQSNE 532
+++ + QHI +S+ E G+ P +L PQSNE
Sbjct: 246 VKKVKIEKQHITKKSDVEYSGFTDPYQLYHVVPQSNE 282
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 598 KKGRHQSRSWEPSSSKTESRYRARSRSVQARR 693
KK R +S++W SSS++ SR R+RSR R
Sbjct: 61 KKVRRRSKTW--SSSRSRSRSRSRSRGRSQER 90
>U12964-2|AAL02498.1| 293|Caenorhabditis elegans Hypothetical
protein F26F4.6 protein.
Length = 293
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = -2
Query: 730 LADSLFRNISMDNGVPGLTEISPDTCFPFCLTMAPKTGSGAFPSS*RVMFSTLGSSKSKG 551
L+ + + +D P LT++ D + TGS + PSS +ST SS S
Sbjct: 63 LSQEIEKKEDLDTDSPNLTKVIDDVA-------SGATGSSSLPSSSTESYSTSSSSSSSS 115
Query: 550 NALESLF 530
+ L S +
Sbjct: 116 SDLNSAY 122
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 595 MKKGRHQSRSWEPSSSKTESRYRARSRSVQARRCP 699
+++GR +SRS S S++ SR +RSRSV + P
Sbjct: 165 VRRGRSKSRSRSRSPSRSRSR--SRSRSVSRSKSP 197
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 595 MKKGRHQSRSWEPSSSKTESRYRARSRSVQARRCP 699
+++GR +SRS S S++ SR +RSRSV + P
Sbjct: 165 VRRGRSKSRSRSRSPSRSRSR--SRSRSVSRSKSP 197
>Z83226-2|CAB05723.1| 211|Caenorhabditis elegans Hypothetical
protein F43D2.3 protein.
Length = 211
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 631 PSSSKTESRYRARSRSVQARRCPWRYS*TTSRPAS 735
P ++T S + RSV+ RR P RY T PA+
Sbjct: 40 PDDNQTTSTNMSPRRSVRIRRMPVRYGSTMQPPAT 74
>AF016657-2|AAB93652.1| 366|Caenorhabditis elegans Hypothetical
protein C16C4.6 protein.
Length = 366
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +3
Query: 360 TFILDLQDPHKCGVTRVLNKISGSRTFYHNILIEGLNGNREAISVRCVLSGKHHNLTKRD 539
+F++DL D VT+ S + + + L +NG+ +S C+ + NL D
Sbjct: 238 SFVMDLNDLLAINVTKAEVYFSFTLSNVNLFLRHFINGSNPRLSEICIELKRRENL--ED 295
Query: 540 SRAFPFDF 563
S +F F F
Sbjct: 296 SWSFAFQF 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,175,262
Number of Sequences: 27780
Number of extensions: 418861
Number of successful extensions: 1250
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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