Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_F08
         (880 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RRM8 Cluster: Putative uncharacterized protein PY0069...    38   0.44 
UniRef50_Q54SU0 Cluster: Putative uncharacterized protein; n=1; ...    35   3.1  
UniRef50_UPI000051A3B6 Cluster: PREDICTED: similar to CG7065-PA;...    34   4.1  
UniRef50_A0BIW4 Cluster: Chromosome undetermined scaffold_11, wh...    34   4.1  

>UniRef50_Q7RRM8 Cluster: Putative uncharacterized protein PY00691;
           n=5; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY00691 - Plasmodium yoelii yoelii
          Length = 1411

 Score = 37.5 bits (83), Expect = 0.44
 Identities = 26/72 (36%), Positives = 36/72 (50%)
 Frame = +3

Query: 390 SRTIPENIKFVLLFIEDNGDPSCLVKFANSYICNLALMELENVEIDGKRLFINLDTDNLF 569
           SR I +    ++L + +N D   L    N+YI N    ELEN+ I+  +   NL   N  
Sbjct: 31  SRIIKDMFYSIILVLINNVDKYNLANCINNYIIN----ELENISIESVQ---NLSKKNNK 83

Query: 570 NKKRNMNRNIFK 605
           NKK N N  I+K
Sbjct: 84  NKKNNENSEIYK 95


>UniRef50_Q54SU0 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 707

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
 Frame = +3

Query: 318 LYIKPIPKFWNAEKVKSFIQ-DKCKSRTIPENIKFVLLFIEDNGDP-SCLVKFANSY-IC 488
           L+I P P   N+ K+ +  + D+ K +   + ++  +  IE N +  S LV  A+ + I 
Sbjct: 259 LFISPFPNLTNSFKILTIKELDEIKMKLTRQELESNVQDIETNNEIISKLVGMASKFTIE 318

Query: 489 NLALMELENVEIDGKRLFI-NLDTDNLFNKKRNMNRNIFK 605
           N+ LMELE  +  GK + I   ++  +F   +N   N+FK
Sbjct: 319 NVDLMELEPHQ-KGKSIIITGKESFKIFRSCKNNIENVFK 357


>UniRef50_UPI000051A3B6 Cluster: PREDICTED: similar to CG7065-PA; n=1;
            Apis mellifera|Rep: PREDICTED: similar to CG7065-PA -
            Apis mellifera
          Length = 1243

 Score = 34.3 bits (75), Expect = 4.1
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +2

Query: 215  YGRSRSRSPVRSKNLSKQND 274
            + RSRSRSPVRSK L+K ND
Sbjct: 1052 HSRSRSRSPVRSKELTKTND 1071


>UniRef50_A0BIW4 Cluster: Chromosome undetermined scaffold_11, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_11,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 156

 Score = 34.3 bits (75), Expect = 4.1
 Identities = 18/35 (51%), Positives = 21/35 (60%)
 Frame = +2

Query: 389 IKDNTRKYKICVTFHRRQR*PFMSGQICKFLHMQF 493
           IKD  RKY+I V F   Q  PF   QICK +H+ F
Sbjct: 114 IKDKLRKYRINVHF---QINPFYQVQICKIIHLHF 145


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,922,775
Number of Sequences: 1657284
Number of extensions: 13146730
Number of successful extensions: 31662
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31630
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)