Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_F05
         (858 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    26   1.7  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    26   1.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   3.9  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    24   6.8  

>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
 Frame = +1

Query: 295 LVKVTTTNKESYECQLPELRSTESTSIDDYDGPSPLHLLKPLMNKEMCSYR-LESYWSYE 471
           LV + T  + SYE + P  R    T  +          +  +  K M +   LE YW+  
Sbjct: 10  LVGLCTAYQYSYEYEFPSSRPFNKTGFEFGAWEPNKEYVYNVTTKTMTALPDLEDYWTGI 69

Query: 472 VCHGRYIRR 498
           V HG  + R
Sbjct: 70  VTHGYLVIR 78


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
 Frame = +1

Query: 295 LVKVTTTNKESYECQLPELRSTESTSIDDYDGPSPLHLLKPLMNKEMCSYR-LESYWSYE 471
           LV + T  + SYE + P  R    T  +          +  +  K M +   LE YW+  
Sbjct: 10  LVGLCTAYQYSYEYEFPSSRPFNKTGFEFGAWEPNKEYVYNVTTKTMTALPDLEDYWTGI 69

Query: 472 VCHGRYIRR 498
           V HG  + R
Sbjct: 70  VTHGYLVIR 78


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 373 IDDYDGPSPLHLLKPLMNKE 432
           +D   G  PLH LK  +NKE
Sbjct: 420 LDSSGGRPPLHALKDFINKE 439


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 16/65 (24%), Positives = 29/65 (44%)
 Frame = +1

Query: 448 LESYWSYEVCHGRYIRRYHEEREGKQINTQEYFLGYWSSEKQAKLEAEMKAAQESKQIPK 627
           L+   S +  H +  + YH E+E K++   +         KQ +L    K  +E+ ++ K
Sbjct: 222 LKQECSEKQVHFQLFKLYHNEKEAKRLKEDQI-------SKQQELNIIEKRKEEADEVLK 274

Query: 628 TTKVE 642
             K E
Sbjct: 275 EKKKE 279


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,114
Number of Sequences: 2352
Number of extensions: 15796
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)