Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_F05
(858 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132876-2|CAB60843.3| 534|Caenorhabditis elegans Hypothetical ... 100 2e-21
U23514-6|AAC46544.2| 816|Caenorhabditis elegans Hypothetical pr... 39 0.004
AF067937-1|AAF99912.1| 533|Caenorhabditis elegans Hypothetical ... 31 1.1
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z82280-9|CAB05263.3| 415|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z82275-2|CAC42314.2| 415|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL021479-3|CAA16324.1| 279|Caenorhabditis elegans Hypothetical ... 29 4.2
Z74031-13|CAE54903.1| 383|Caenorhabditis elegans Hypothetical p... 29 5.6
Z74031-12|CAE54902.1| 460|Caenorhabditis elegans Hypothetical p... 29 5.6
Z74031-11|CAD54138.1| 474|Caenorhabditis elegans Hypothetical p... 29 5.6
Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical pr... 28 9.8
AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical ... 28 9.8
>AL132876-2|CAB60843.3| 534|Caenorhabditis elegans Hypothetical
protein Y105E8A.2 protein.
Length = 534
Score = 100 bits (239), Expect = 2e-21
Identities = 55/184 (29%), Positives = 100/184 (54%), Gaps = 4/184 (2%)
Frame = +1
Query: 199 DDSISFGINWPGNP-NLNENFVDGEKNKSQNQELVKVTTTNKESYECQLPELRSTESTSI 375
DDSI + +++ + + + N + + V++ + N E + C+LP++ ++
Sbjct: 29 DDSIHYYVSFTSDSVTIKDPPTLETGNTELSDDYVRIMSKNNERFLCKLPQIDVEVKKNV 88
Query: 376 DDYDGPSPLHLLKPLMNKE-MCSYRLESYWSYEVCHGRYIRRYHEERE-GKQINTQEYFL 549
+ Y G + LL+ ++ K+ MCSY ++ YW+Y+VCHGRY+ +YHE++ Q++ E++L
Sbjct: 89 E-YSGATAGKLLETMLYKDKMCSYLIDVYWTYQVCHGRYVIQYHEDKMLTGQVSRTEFYL 147
Query: 550 GYWSSEKQAKLEAEMKAAQESKQIPKTTKVEGVALPNVEIVMDDGTICDL-NGKPRLTRV 726
G + S A ++K P T ++E P + + GT CD+ GKPR T V
Sbjct: 148 GNFDSALTASTNEQVK--------PATRRIENEDYPYYSVSYNHGTSCDVTGGKPRTTDV 199
Query: 727 HYVC 738
Y+C
Sbjct: 200 VYIC 203
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/83 (22%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +1
Query: 403 HLLKPLMNKEMCSYRLESYWSYEVCHGRYIRRYHEEREGKQINTQEYFLGYWSS---EKQ 573
H + ++ E C +W YE C+G+++ ++HE+ G++ + LG + ++
Sbjct: 341 HTVNRILTGEDCIVGGTGWWKYEFCYGKHVIQFHEDANGQR---SDILLGVFDEVVHKEW 397
Query: 574 AKLEAEMKAA-QESKQIPKTTKV 639
KL+ + A Q + QI + +++
Sbjct: 398 VKLDRHARGAIQGNNQIDQISQI 420
>U23514-6|AAC46544.2| 816|Caenorhabditis elegans Hypothetical
protein F48E8.4 protein.
Length = 816
Score = 39.1 bits (87), Expect = 0.004
Identities = 45/172 (26%), Positives = 66/172 (38%), Gaps = 6/172 (3%)
Frame = +1
Query: 241 NLNENFVDGEKNKSQNQELVKVTTTNKESYECQLPELRSTESTSIDDYDGPSPL-HLLKP 417
+L + V+ + S Q L+ VT+ + + C LP++ + P L
Sbjct: 58 DLEKRIVNRIPDDSTEQNLMFVTSKGGQKFACSLPDVEDVKKDKPKSSKNPKIYGDALAA 117
Query: 418 LMNKEMC-SYRLESYWSYEVCHGRYIRRYHEE--REGKQINTQEYFLGYWSSEKQAKLEA 588
+ C R +WSY +C G+ I + H E +EG N F G
Sbjct: 118 SFYVDKCVKLRGNHWWSYILCRGQTIEQVHGEPGQEGYVKNILGLFDG----------SL 167
Query: 589 EMKAAQESKQIPKTTKVEGVALPNVEIVMDDGTICDLN--GKPRLTRVHYVC 738
+M + QES L VE GT CDL +PR+T V Y C
Sbjct: 168 KMPSYQESTD---------DRLLFVEETYTSGTFCDLEEYREPRMTSVRYEC 210
>AF067937-1|AAF99912.1| 533|Caenorhabditis elegans Hypothetical
protein F22F7.4 protein.
Length = 533
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -1
Query: 543 IFLGVDLFALSFFVIPPDIPSMAYFIAPIAFQSV*THFFVH 421
+FL + L LS FV+P +P I P FQS TH F+H
Sbjct: 28 VFLAILLIGLSIFVLPRFLPKPVSKIQP--FQS--THTFIH 64
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 490 IRRYHEEREGKQINTQEYFLGYWSSEKQAKLEAEMKAAQESKQIPK 627
+R+ EE + K++ +E + + E + KLEAEM+ E +I +
Sbjct: 463 VRKLKEEEKRKRVLEEEMEMKRKNEEAKIKLEAEMREKAEQAEIKR 508
>Z82280-9|CAB05263.3| 415|Caenorhabditis elegans Hypothetical
protein R05A10.1 protein.
Length = 415
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 583 EAEMKAAQESKQIPKTTKVEGVALPNVEIVMDDG 684
EA MK E ++P T V+GV LP ++D G
Sbjct: 138 EAAMKKHGEKNEVPGKTNVDGVDLPKGWSLVDGG 171
>Z82275-2|CAC42314.2| 415|Caenorhabditis elegans Hypothetical
protein R05A10.1 protein.
Length = 415
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 583 EAEMKAAQESKQIPKTTKVEGVALPNVEIVMDDG 684
EA MK E ++P T V+GV LP ++D G
Sbjct: 138 EAAMKKHGEKNEVPGKTNVDGVDLPKGWSLVDGG 171
>AL021479-3|CAA16324.1| 279|Caenorhabditis elegans Hypothetical
protein Y22F5A.5 protein.
Length = 279
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 223 NWPGNPNLNENFVDGEKNKSQNQELVKVTTTNK 321
NWP NP N NF++ +++Q L TN+
Sbjct: 148 NWPNNPTANVNFINSIISRAQQYGLSVGIYTNQ 180
>Z74031-13|CAE54903.1| 383|Caenorhabditis elegans Hypothetical
protein F32D8.12c protein.
Length = 383
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 658 NVEIVMDDGTICDLNGKPRLTR 723
N+E+V+ DGTI D GK R R
Sbjct: 84 NLEVVLADGTIIDTKGKGRCPR 105
>Z74031-12|CAE54902.1| 460|Caenorhabditis elegans Hypothetical
protein F32D8.12b protein.
Length = 460
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 658 NVEIVMDDGTICDLNGKPRLTR 723
N+E+V+ DGTI D GK R R
Sbjct: 161 NLEVVLADGTIIDTKGKGRCPR 182
>Z74031-11|CAD54138.1| 474|Caenorhabditis elegans Hypothetical
protein F32D8.12a protein.
Length = 474
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 658 NVEIVMDDGTICDLNGKPRLTR 723
N+E+V+ DGTI D GK R R
Sbjct: 175 NLEVVLADGTIIDTKGKGRCPR 196
>Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical
protein R09A8.1 protein.
Length = 1095
Score = 27.9 bits (59), Expect = 9.8
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +1
Query: 268 EKNKSQNQELVKVTTTNKESYECQLPELRSTESTSIDDYDGPSPLHLLKPLMNKEMCSYR 447
EKN+ +E++K+ N++ Y+ P STS D + +KE+ S
Sbjct: 468 EKNRRHMEEMMKIAEQNEQLYQFPRPNQSCYSSTSSHRKDSMT-------TDSKEITSSD 520
Query: 448 LESYWSYEVCHGRYIR--RYHEEREGKQ 525
+E Y S+ + G+ R RY E ++ ++
Sbjct: 521 MEVY-SFAIKEGKCFRLKRYMEWKKDEK 547
>AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical
protein D1007.15 protein.
Length = 1184
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 304 VTTTNKESYECQLPELRSTESTSIDDYDGP 393
+ T N+ CQLP L S S+D++ GP
Sbjct: 472 IATANRRCV-CQLPSLLGFTSKSLDNFQGP 500
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,417,949
Number of Sequences: 27780
Number of extensions: 362362
Number of successful extensions: 1093
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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