Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_F03
         (844 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC113427-1|AAI13428.1| 1048|Homo sapiens zinc finger protein 217...    31   4.0  
AL157838-2|CAC08433.1| 1048|Homo sapiens zinc finger protein 217...    31   4.0  
AF041259-1|AAC39895.1| 1048|Homo sapiens breast cancer putative ...    31   4.0  

>BC113427-1|AAI13428.1| 1048|Homo sapiens zinc finger protein 217
           protein.
          Length = 1048

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 9   FRTRHEDVAHVRTHDRDRRA-ARPPCLTFSAP*RGFSSSTLCA 134
           FRT H+ V H R H +DRRA A  P ++      G  S  L A
Sbjct: 384 FRTYHQLVLHSRVHKKDRRAGAESPTMSVDGRQPGTCSPDLAA 426


>AL157838-2|CAC08433.1| 1048|Homo sapiens zinc finger protein 217
           protein.
          Length = 1048

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 9   FRTRHEDVAHVRTHDRDRRA-ARPPCLTFSAP*RGFSSSTLCA 134
           FRT H+ V H R H +DRRA A  P ++      G  S  L A
Sbjct: 384 FRTYHQLVLHSRVHKKDRRAGAESPTMSVDGRQPGTCSPDLAA 426


>AF041259-1|AAC39895.1| 1048|Homo sapiens breast cancer putative
           transcription factor protein.
          Length = 1048

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 9   FRTRHEDVAHVRTHDRDRRA-ARPPCLTFSAP*RGFSSSTLCA 134
           FRT H+ V H R H +DRRA A  P ++      G  S  L A
Sbjct: 384 FRTYHQLVLHSRVHKKDRRAGAESPTMSVDGRQPGTCSPDLAA 426


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,904,698
Number of Sequences: 237096
Number of extensions: 2712947
Number of successful extensions: 11663
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11662
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)