Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_E24
         (869 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80030-8|AAG24166.2|  375|Caenorhabditis elegans Serpentine rece...    31   1.1  
AC025716-1|AAK39606.1|  788|Caenorhabditis elegans Hypothetical ...    30   2.5  
AC084197-35|AAN63424.1|  505|Caenorhabditis elegans Puf (pumilio...    29   3.3  
AL021488-1|CAB63369.1|  502|Caenorhabditis elegans Hypothetical ...    29   4.3  
U40059-1|AAA81138.3|  867|Caenorhabditis elegans Hypothetical pr...    29   5.7  
AL034393-6|CAA22321.1|  507|Caenorhabditis elegans Hypothetical ...    29   5.7  
Z70311-6|CAA94379.3|  442|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z79601-3|CAB01883.2|  640|Caenorhabditis elegans Hypothetical pr...    28   10.0 

>U80030-8|AAG24166.2|  375|Caenorhabditis elegans Serpentine
           receptor, class w protein112 protein.
          Length = 375

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +2

Query: 119 KHRDITKEYYHNGLREVFIDNFIDCFNLF 205
           K  ++  EYY+ GL ++F+DN +  +N+F
Sbjct: 194 KGNEMVDEYYYRGLSDLFMDNEMLIYNIF 222


>AC025716-1|AAK39606.1|  788|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.11 protein.
          Length = 788

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = +3

Query: 24  TKKLKLMDFLNEINSECRIRNTENAGVVQ--QKANTEILRRNI 146
           T  +KLM  L+E+N +CR   TE A + +  ++A T++ R N+
Sbjct: 131 TDNMKLM--LDELNDQCRKWETEKAKLTEHFKEAETQLRRENV 171


>AC084197-35|AAN63424.1|  505|Caenorhabditis elegans Puf
           (pumilio/fbf) domain-containingprotein 11 protein.
          Length = 505

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/61 (24%), Positives = 28/61 (45%)
 Frame = +1

Query: 205 FINSQTADNINLFELCIKAPGCMLLQEPSRKYRTETSRSCWRSGGSLSLSMFQSMNRHQT 384
           F+    AD+ NL  +C    GC ++Q       ++T   C++    L  S+   + R+ +
Sbjct: 289 FVVEFFADDDNLIHVCQDKYGCRVIQSTVETLSSDTYAECYQQRVVLLRSLMSGVTRNCS 348

Query: 385 Q 387
           Q
Sbjct: 349 Q 349


>AL021488-1|CAB63369.1|  502|Caenorhabditis elegans Hypothetical
           protein Y45F10A.2 protein.
          Length = 502

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = +1

Query: 223 ADNINLFELCIKAPGCMLLQEPSRKYRTETSRSCWRSGGSLSLSMFQSMNRHQTQ 387
           AD+ NL  +C    GC ++Q       T+    C++    L  S+   + R+ TQ
Sbjct: 292 ADDDNLIHVCQDKYGCRVIQSTVETLSTDQYAQCYQHRVILLRSLMAGVTRNCTQ 346


>U40059-1|AAA81138.3|  867|Caenorhabditis elegans Hypothetical
           protein K03C7.1 protein.
          Length = 867

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = +3

Query: 339 QPVFVNVPVDESSPDTEFDIKVEQNSDIKEEPQDSDDE 452
           +P +   P DE  P+ +F + ++   D ++EP+D+DDE
Sbjct: 507 KPPWEEDPDDE--PEADFTVPIKPGED-EDEPEDADDE 541


>AL034393-6|CAA22321.1|  507|Caenorhabditis elegans Hypothetical
           protein Y18D10A.8 protein.
          Length = 507

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +3

Query: 363 VDESSPDTEFDIKVEQNSDIKEEPQDSDDELL 458
           +DE   D + DIK+EQ SD K      D ELL
Sbjct: 349 IDEDDDDDDEDIKLEQTSDGKLTFHCDDPELL 380


>Z70311-6|CAA94379.3|  442|Caenorhabditis elegans Hypothetical
           protein T25B9.8 protein.
          Length = 442

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 339 QPVFVNVPVDESSPDTEFDIKVEQNSDIKE 428
           Q VF N   +ESS D EFD   E ++D+ +
Sbjct: 135 QSVFPNEMEEESSMDNEFDANSENSNDMAQ 164


>Z79601-3|CAB01883.2|  640|Caenorhabditis elegans Hypothetical
           protein K09A9.1 protein.
          Length = 640

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +1

Query: 118 QTQRYYEG-ILSQWSKRSVH*QFYRLLQFIFINSQTADNINLFELCI 255
           QT+  +   +L +W    V     RL     I+S TAD I L ELCI
Sbjct: 218 QTREMFTAHVLPEWKASKVIDVIRRLQIPTDISSMTADEIRLSELCI 264


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,050,940
Number of Sequences: 27780
Number of extensions: 331874
Number of successful extensions: 997
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)