Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_E16
(1037 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 125 5e-29
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 124 8e-29
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 119 4e-27
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 119 4e-27
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 118 5e-27
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 117 1e-26
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 76 4e-14
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 76 4e-14
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 58 1e-08
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 58 1e-08
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 56 4e-08
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 54 2e-07
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 53 4e-07
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 51 1e-06
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 51 1e-06
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 51 2e-06
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 51 2e-06
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 50 2e-06
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 50 2e-06
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 50 2e-06
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 50 2e-06
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 49 6e-06
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 49 6e-06
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 47 3e-05
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 44 1e-04
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 44 1e-04
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 31 1.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 30 2.4
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 30 3.1
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 3.1
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.1
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 5.4
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 5.4
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 5.4
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 5.4
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 7.2
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 29 7.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 7.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 7.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 7.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 7.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 7.2
Z69383-11|CAM06588.1| 110|Caenorhabditis elegans Hypothetical p... 28 9.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 9.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 9.5
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 28 9.5
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 28 9.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 9.5
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 125 bits (302), Expect = 5e-29
Identities = 57/72 (79%), Positives = 60/72 (83%)
Frame = +2
Query: 200 YHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPX 379
Y+GDSDLQLERINVYYNEASGGKYVPRA LVDLEPGTMDSVR+GPFGQ+ RPDNF
Sbjct: 36 YNGDSDLQLERINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQS 95
Query: 380 GAGXXWAXGXXT 415
GAG WA G T
Sbjct: 96 GAGNNWAKGHYT 107
Score = 79.0 bits (186), Expect = 5e-15
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 195
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTG
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTG 34
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 124 bits (300), Expect = 8e-29
Identities = 56/72 (77%), Positives = 60/72 (83%)
Frame = +2
Query: 200 YHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPX 379
Y G+SDLQLERINVYYNEA+GGKYVPRA+LVDLEPGTMDSVRSGPFGQ+ RPDNF
Sbjct: 36 YKGESDLQLERINVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQS 95
Query: 380 GAGXXWAXGXXT 415
GAG WA G T
Sbjct: 96 GAGNNWAKGHYT 107
Score = 73.7 bits (173), Expect = 2e-13
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 195
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDG 34
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 119 bits (286), Expect = 4e-27
Identities = 54/72 (75%), Positives = 57/72 (79%)
Frame = +2
Query: 200 YHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPX 379
Y GDSDLQLERINVYYNEA KYVPRA+LVDLEPGTMDSVRSGPFGQ+ RPDN+
Sbjct: 36 YVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQS 95
Query: 380 GAGXXWAXGXXT 415
GAG WA G T
Sbjct: 96 GAGNNWAKGHYT 107
Score = 76.2 bits (179), Expect = 4e-14
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 195
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSG 34
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 119 bits (286), Expect = 4e-27
Identities = 54/72 (75%), Positives = 57/72 (79%)
Frame = +2
Query: 200 YHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPX 379
Y GDSDLQLERINVYYNEA KYVPRA+LVDLEPGTMDSVRSGPFGQ+ RPDN+
Sbjct: 36 YVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQS 95
Query: 380 GAGXXWAXGXXT 415
GAG WA G T
Sbjct: 96 GAGNNWAKGHYT 107
Score = 76.2 bits (179), Expect = 4e-14
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 195
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSG 34
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 118 bits (285), Expect = 5e-27
Identities = 53/72 (73%), Positives = 59/72 (81%)
Frame = +2
Query: 200 YHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPX 379
+ G+SDLQLERI+VYYNEA+ GKYVPRA+LVDLEPGTMDSVRSGPFGQ+ RPDNF
Sbjct: 36 FKGESDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQS 95
Query: 380 GAGXXWAXGXXT 415
GAG WA G T
Sbjct: 96 GAGNNWAKGHYT 107
Score = 72.5 bits (170), Expect = 4e-13
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 195
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDG 34
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 117 bits (282), Expect = 1e-26
Identities = 52/72 (72%), Positives = 59/72 (81%)
Frame = +2
Query: 200 YHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPX 379
+ G++DLQLERI+VYYNEA+ GKYVPRA+LVDLEPGTMDSVRSGPFGQ+ RPDNF
Sbjct: 36 FKGETDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQS 95
Query: 380 GAGXXWAXGXXT 415
GAG WA G T
Sbjct: 96 GAGNNWAKGHYT 107
Score = 72.5 bits (170), Expect = 4e-13
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 195
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDG 34
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 76.2 bits (179), Expect = 4e-14
Identities = 35/69 (50%), Positives = 45/69 (65%)
Frame = +2
Query: 200 YHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPX 379
Y GD+ QLERI YY E G KYVPRAILVDL+P +++ VRS +G++ P+N
Sbjct: 36 YKGDNGSQLERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGES 95
Query: 380 GAGXXWAXG 406
GAG W+ G
Sbjct: 96 GAGNNWSRG 104
Score = 60.5 bits (140), Expect = 2e-09
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 195
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDG 34
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 76.2 bits (179), Expect = 4e-14
Identities = 35/69 (50%), Positives = 45/69 (65%)
Frame = +2
Query: 200 YHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPX 379
Y GD+ QLERI YY E G KYVPRAILVDL+P +++ VRS +G++ P+N
Sbjct: 36 YKGDNGSQLERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGES 95
Query: 380 GAGXXWAXG 406
GAG W+ G
Sbjct: 96 GAGNNWSRG 104
Score = 60.5 bits (140), Expect = 2e-09
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 195
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDG 34
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 57.6 bits (133), Expect = 1e-08
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +2
Query: 200 YHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXX 370
YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+G + + P+
Sbjct: 41 YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLS 100
Query: 371 XPXGAGXXWAXGXXT 415
A +A G T
Sbjct: 101 GKEDAANCYARGRYT 115
Score = 40.7 bits (91), Expect = 0.002
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +1
Query: 97 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 195
RE++ I GQ G QIG WE+ EHGI P G
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG 40
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 57.6 bits (133), Expect = 1e-08
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +2
Query: 200 YHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXX 370
YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+G + + P+
Sbjct: 13 YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLS 72
Query: 371 XPXGAGXXWAXGXXT 415
A +A G T
Sbjct: 73 GKEDAANCYARGRYT 87
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 56.0 bits (129), Expect = 4e-08
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +2
Query: 227 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPXGAGXXWAXG 406
+ + +++E+ GK+VPRAI VDLEP +D +R+G +G + PD A +A G
Sbjct: 50 QSLQAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARG 109
Query: 407 XXT 415
T
Sbjct: 110 HYT 112
Score = 39.1 bits (87), Expect = 0.005
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 97 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCL 201
RE V I GQ G QIG WE+ EHG+D G L
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFL 40
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 54.0 bits (124), Expect = 2e-07
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +2
Query: 236 NVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPXGAGXXWAXGXXT 415
N +++E GK+VPRAI VDLEP +D VR+G + ++ P+ A +A G T
Sbjct: 50 NTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYT 109
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLP 204
MREIV I GQ G QIG WE+ EHGI P G +P
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMP 37
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 52.8 bits (121), Expect = 4e-07
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +2
Query: 227 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPXGAGXXWAXG 406
+ N +++E GK+VPRAI+VDLEP +D +R+G + + P+ A +A G
Sbjct: 52 DSFNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARG 111
Query: 407 XXT 415
T
Sbjct: 112 HYT 114
Score = 42.3 bits (95), Expect = 5e-04
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 88 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCL 201
N+ RE++ I GQ G Q+G WE+ EHGI P G +
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMI 41
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +2
Query: 209 DSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPXGAG 388
D E ++++ G+YVPR+I VDLEP +D +R+G + ++ P+ A
Sbjct: 39 DQQADGESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAA 98
Query: 389 XXWAXGXXT 415
+A G T
Sbjct: 99 NNYARGHYT 107
Score = 45.6 bits (103), Expect = 6e-05
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLP 204
MRE++ I GQ G QIG WE+ EHGI P G +P
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMP 37
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +2
Query: 209 DSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPXGAG 388
D E ++++ G+YVPR+I VDLEP +D +R+G + ++ P+ A
Sbjct: 39 DQQADGESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAA 98
Query: 389 XXWAXGXXT 415
+A G T
Sbjct: 99 NNYARGHYT 107
Score = 45.6 bits (103), Expect = 6e-05
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLP 204
MRE++ I GQ G QIG WE+ EHGI P G +P
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMP 37
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 50.8 bits (116), Expect = 2e-06
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2
Query: 227 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPXGAGXXWAXG 406
E ++++ G+YVPR+I VDLEP +D +R+G + ++ P+ A +A G
Sbjct: 45 ESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Query: 407 XXT 415
T
Sbjct: 105 HYT 107
Score = 45.6 bits (103), Expect = 6e-05
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLP 204
MRE++ I GQ G QIG WE+ EHGI P G +P
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMP 37
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 50.8 bits (116), Expect = 2e-06
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2
Query: 227 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPXGAGXXWAXG 406
E ++++ G+YVPR+I VDLEP +D +R+G + ++ P+ A +A G
Sbjct: 45 ESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Query: 407 XXT 415
T
Sbjct: 105 HYT 107
Score = 45.6 bits (103), Expect = 6e-05
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLP 204
MRE++ I GQ G QIG WE+ EHGI P G +P
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMP 37
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +2
Query: 227 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPXGAGXXWAXG 406
+ + +++E G++VPRA++VDLEP +D +R+G + + P+ A +A G
Sbjct: 47 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Query: 407 XXT 415
T
Sbjct: 107 HYT 109
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLP 204
MRE++ I GQ G QIG WE+ EHGI P G +P
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMP 37
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +2
Query: 227 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPXGAGXXWAXG 406
+ + +++E G++VPRA++VDLEP +D +R+G + + P+ A +A G
Sbjct: 46 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 105
Query: 407 XXT 415
T
Sbjct: 106 HYT 108
Score = 42.3 bits (95), Expect = 5e-04
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +1
Query: 97 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLP 204
RE++ I GQ G QIG WE+ EHGI P G +P
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMP 36
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +2
Query: 227 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPXGAGXXWAXG 406
+ + +++E G++VPRA++VDLEP +D +R+G + + P+ A +A G
Sbjct: 47 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Query: 407 XXT 415
T
Sbjct: 107 HYT 109
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLP 204
MRE++ I GQ G QIG WE+ EHGI P G +P
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMP 37
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +2
Query: 227 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPXGAGXXWAXG 406
+ + +++E G++VPRA++VDLEP +D +R+G + + P+ A +A G
Sbjct: 47 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Query: 407 XXT 415
T
Sbjct: 107 HYT 109
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLP 204
MRE++ I GQ G QIG WE+ EHGI P G +P
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMP 37
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 48.8 bits (111), Expect = 6e-06
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 242 YYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPXGAGXXWAXGXXT 415
++++ G+YVPR+I VDLEP +D +R+G + ++ P+ A +A G T
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYT 107
Score = 45.6 bits (103), Expect = 6e-05
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLP 204
MRE++ I GQ G QIG WE+ EHGI P G +P
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMP 37
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 48.8 bits (111), Expect = 6e-06
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 242 YYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPXGAGXXWAXGXXT 415
++++ G+YVPR+I VDLEP +D +R+G + ++ P+ A +A G T
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYT 107
Score = 45.6 bits (103), Expect = 6e-05
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLP 204
MRE++ I GQ G QIG WE+ EHGI P G +P
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMP 37
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 46.8 bits (106), Expect = 3e-05
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = +2
Query: 233 INVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRPDNFXXXPXGAGXXWAXGXX 412
+ ++++ G++VPR+I VDLEP +D +R+G + ++ P+ A +A G
Sbjct: 46 LGTFFSDTGYGRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHY 105
Query: 413 T 415
T
Sbjct: 106 T 106
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 195
MRE++ I GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG 34
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 227 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGP-FGQIXRPDNFXXXP--XGAGXXW 397
++ ++ + +A YVPRA+LVDLEP ++ + P F + DN GAG W
Sbjct: 47 DKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNW 106
Query: 398 AXGXXTGR 421
A G G+
Sbjct: 107 ASGYCQGQ 114
Score = 40.3 bits (90), Expect = 0.002
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 103 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 195
++ + GQCGNQ+ FW+ + DEHGI+ G
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERG 37
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 227 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGP-FGQIXRPDNFXXXP--XGAGXXW 397
++ ++ + +A YVPRA+LVDLEP ++ + P F + DN GAG W
Sbjct: 47 DKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNW 106
Query: 398 AXGXXTGR 421
A G G+
Sbjct: 107 ASGYCQGQ 114
Score = 40.3 bits (90), Expect = 0.002
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 103 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 195
++ + GQCGNQ+ FW+ + DEHGI+ G
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERG 37
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 30.7 bits (66), Expect = 1.8
Identities = 29/104 (27%), Positives = 34/104 (32%), Gaps = 3/104 (2%)
Frame = -3
Query: 900 RGXXXGEXRPXXXAGXXGQQXGGPGGGXXGXGGAGQXXXXXXXXXGXXXRRSGXVDXXXX 721
RG G R G + G GGG G GG + G R G D
Sbjct: 8 RGGGGGGFRGGRGGDRGGSRGGFGGGGRGGYGGGDRGSFGGGDRGGFRGGRGGG-DRGGF 66
Query: 720 EGXKRG--VAGXAY*SAPRXXXXXRG-XGGGLXAPAEXXGRXGG 598
G + G G +PR RG GG +P G GG
Sbjct: 67 RGGRGGGDRGGFGGRGSPRGGFGGRGSPRGGRGSPRGGRGGAGG 110
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = +3
Query: 357 TTSXPDRPGPAXXGPXXXTRXGARPPPXXRPXSXRXGPRPXPXXGVXSXLPNXPQPPXXP 536
+T+ P P PA P P P S P P P S +P P PP P
Sbjct: 463 STTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSP-PPPPPLPPIATPSSVPPPPPPPPPP 521
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 885 GEXRPXXXAGXXGQQXGGPGGGXXGXGGAG 796
G R G G + GG GGG G GGAG
Sbjct: 53 GGGRGGGRGGSGGGRGGGSGGGRGGSGGAG 82
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -3
Query: 903 GRGXXXGEXRPXXXAGXXGQQXGGPGGGXXGXGGAG 796
G+G G G GQ GG GG G GG G
Sbjct: 166 GQGGWGGSQDGGSQGGWGGQNGGGQGGNQGGGGGRG 201
Score = 28.3 bits (60), Expect = 9.5
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Frame = -2
Query: 535 GXXGGWGXFGRXDXTPXXGXG--RGPXRXXXGRXXGGGRAPXRVXXXGPXXAGPGRSG 368
G GGWG G G RG R G GGG R G AG G SG
Sbjct: 33 GSSGGWGGSDASAGASAGGTGGGRGGGRGGSGGGRGGGSGGGR---GGSGGAGAGGSG 87
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 29.9 bits (64), Expect = 3.1
Identities = 26/92 (28%), Positives = 30/92 (32%), Gaps = 3/92 (3%)
Frame = -3
Query: 858 GXXGQQXGGPGGGXXGXGGAGQXXXXXXXXXGXXXRRSGXVDXXXXEGXKRGV--AGXAY 685
G G + G PGG G GG+G G RSG G + G +
Sbjct: 308 GGHGSRSGSPGG-RHGHGGSGHHRGGRHGGHGRHGSRSGSPGGRHGHGGRHGPPHCPGRH 366
Query: 684 *SAPRXXXXXRGXG-GGLXAPAEXXGRXGGXG 592
RG G GG P GR G G
Sbjct: 367 GRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHG 398
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.9 bits (64), Expect = 3.1
Identities = 26/104 (25%), Positives = 28/104 (26%)
Frame = -3
Query: 903 GRGXXXGEXRPXXXAGXXGQQXGGPGGGXXGXGGAGQXXXXXXXXXGXXXRRSGXVDXXX 724
G G G G G GG GGG G G G G G
Sbjct: 133 GGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGG 192
Query: 723 XEGXKRGVAGXAY*SAPRXXXXXRGXGGGLXAPAEXXGRXGGXG 592
G G+ G Y G G G P+ G G G
Sbjct: 193 MGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPG 236
Score = 28.3 bits (60), Expect = 9.5
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -3
Query: 936 GESVGXLXXAEGRGXXXGEXRPXXXAGXXGQQXGGPGGGXXGXGGAG 796
G + G G+G G G G GG GGG G GG G
Sbjct: 84 GGAFGGFNGGYGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDGGGGYG 130
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 903 GRGXXXGEXRPXXXAGXXGQQXGGPGGGXXGXGGAG 796
GRG G G G GG GGG G GG G
Sbjct: 28 GRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRG 63
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = -3
Query: 942 YXGE-SVGXLXXAEGRGXXXGEXRPXXXAGXXGQQXGGPGGGXXGXGGAG 796
Y G S G RG G R G G + GG GGG G G G
Sbjct: 6 YGGSRSYGGSSGGGSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGG 55
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.1
Identities = 28/105 (26%), Positives = 28/105 (26%)
Frame = -3
Query: 903 GRGXXXGEXRPXXXAGXXGQQXGGPGGGXXGXGGAGQXXXXXXXXXGXXXRRSGXVDXXX 724
G G G G G GG GGG G GG G G SG
Sbjct: 93 GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG-GGCGGGGGGGCGGGSSGGCGGGS 151
Query: 723 XEGXKRGVAGXAY*SAPRXXXXXRGXGGGLXAPAEXXGRXGGXGS 589
G G G GGG G GG GS
Sbjct: 152 SGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGS 196
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.1
Identities = 28/105 (26%), Positives = 28/105 (26%)
Frame = -3
Query: 903 GRGXXXGEXRPXXXAGXXGQQXGGPGGGXXGXGGAGQXXXXXXXXXGXXXRRSGXVDXXX 724
G G G G G GG GGG G GG G G SG
Sbjct: 93 GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG-GGCGGGGGGGCGGGSSGGCGGGS 151
Query: 723 XEGXKRGVAGXAY*SAPRXXXXXRGXGGGLXAPAEXXGRXGGXGS 589
G G G GGG G GG GS
Sbjct: 152 SGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGS 196
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = -2
Query: 553 GPRXXAGXXGGWG-XFGRXDXTPXXGXGRGPXRXXXGRXXGGGRAPXRVXXXGPXXAGPG 377
G G GGWG G + G G G G GGGR G G G
Sbjct: 61 GSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGG 120
Query: 376 RSG 368
R G
Sbjct: 121 RGG 123
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/63 (28%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Frame = +3
Query: 360 TSXPDRPGPAXXGPXXXTRXGARPPPXX---RPXSXRXGPRPXPXXGVXSXLPNXPQPPX 530
+S P P P + PPP P + P P P V + P P PP
Sbjct: 195 SSIPHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 254
Query: 531 XPA 539
PA
Sbjct: 255 PPA 257
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/63 (28%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Frame = +3
Query: 360 TSXPDRPGPAXXGPXXXTRXGARPPPXX---RPXSXRXGPRPXPXXGVXSXLPNXPQPPX 530
+S P P P + PPP P + P P P V + P P PP
Sbjct: 181 SSIPHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 240
Query: 531 XPA 539
PA
Sbjct: 241 PPA 243
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/63 (28%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Frame = +3
Query: 360 TSXPDRPGPAXXGPXXXTRXGARPPPXX---RPXSXRXGPRPXPXXGVXSXLPNXPQPPX 530
+S P P P + PPP P + P P P V + P P PP
Sbjct: 181 SSIPHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 240
Query: 531 XPA 539
PA
Sbjct: 241 PPA 243
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/57 (29%), Positives = 20/57 (35%)
Frame = +3
Query: 357 TTSXPDRPGPAXXGPXXXTRXGARPPPXXRPXSXRXGPRPXPXXGVXSXLPNXPQPP 527
+T+ P P PA P P P S P P P S +P P PP
Sbjct: 456 STTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSP-PPPPPLPPIATPSSVPPPPPPP 511
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein
R08B4.1b protein.
Length = 1160
Score = 28.7 bits (61), Expect = 7.2
Identities = 24/90 (26%), Positives = 25/90 (27%)
Frame = -3
Query: 858 GXXGQQXGGPGGGXXGXGGAGQXXXXXXXXXGXXXRRSGXVDXXXXEGXKRGVAGXAY*S 679
G G GG GGG G GG G G S G G G
Sbjct: 781 GPTGSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGG 840
Query: 678 APRXXXXXRGXGGGLXAPAEXXGRXGGXGS 589
G G G A A G G G+
Sbjct: 841 GAGDGNGGAGAGNGNGAGA-GNGNGAGAGN 869
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Frame = +3
Query: 369 PDRPGPAXXGPXXXTRXGARPPPXXRPXSXRXGPRPXPXXGVXSXLPNXPQPPXXPAXXR 548
P P P G P P P S P P P G P P P P R
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 324
Query: 549 -GP 554
GP
Sbjct: 325 FGP 327
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +3
Query: 372 DRPGPAXXGPXXXTRXGARPPPXXRPXSXRXGPRPXPXXGVXSXLPNXPQ 521
+RP PA P ARP P P R P P P P+
Sbjct: 199 ERPEPARPAPYIERPVPARPAPYIEPTPARPAPYIEPSTAKPQPRPQPPR 248
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Frame = +3
Query: 369 PDRPGPAXXGPXXXTRXGARPPPXXRPXSXRXGPRPXPXXGVXSXLPNXPQPPXXPAXXR 548
P P P G P P P S P P P G P P P P R
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 334
Query: 549 -GP 554
GP
Sbjct: 335 FGP 337
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +3
Query: 378 PGPAXXGPXXXTRXGARPPPXXRPXSXRXGPRPXPXXGVXSXLPNXPQPPXXPAXXR 548
P P G R G+ PPP S G P P G PP P R
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKR 337
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +3
Query: 378 PGPAXXGPXXXTRXGARPPPXXRPXSXRXGPRPXPXXGVXSXLPNXPQPPXXPAXXR 548
P P G R G+ PPP S G P P G PP P R
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKR 358
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +3
Query: 378 PGPAXXGPXXXTRXGARPPPXXRPXSXRXGPRPXPXXGVXSXLPNXPQPPXXPAXXR 548
P P G R G+ PPP S G P P G PP P R
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKR 343
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = +3
Query: 363 SXPDRPGPAXXGPXXXTRXGARPPPXXRPXSXRXGPRPXPXXGVXSXL-PNXPQPPXXP 536
S P P PA R ++ PP P P P P G+ + N P PP P
Sbjct: 507 SPPTPPPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPP 565
>Z69383-11|CAM06588.1| 110|Caenorhabditis elegans Hypothetical
protein F13E9.15 protein.
Length = 110
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -3
Query: 903 GRGXXXGEXRPXXXAGXXGQQXGGPGGGXXGXGGAGQ 793
G G G+ + G GQQ G PG G G GG Q
Sbjct: 62 GAGQQPGQGQ-GGNGGMGGQQGGQPGQGNGGMGGGQQ 97
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +3
Query: 420 GARPPPXXRPXSXRXGPRPXPXXGVXSXLPNXPQPPXXP 536
G PPP P + GP P P G + P PP P
Sbjct: 712 GPPPPPGLPPITG--GPPPPPPPGGLPPITGGPPPPPPP 748
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +3
Query: 420 GARPPPXXRPXSXRXGPRPXPXXGVXSXLPNXPQPPXXP 536
G PPP P + GP P P G + P PP P
Sbjct: 712 GPPPPPGLPPITG--GPPPPPPPGGLPPITGGPPPPPPP 748
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 861 AGXXGQQXGGPGGGXXGXGGAGQ 793
+G G GP GG G GG GQ
Sbjct: 226 SGPSGSANSGPSGGGGGGGGGGQ 248
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 861 AGXXGQQXGGPGGGXXGXGGAG 796
AG Q GG GGG G GG G
Sbjct: 205 AGHYPSQRGGSGGGGGGGGGGG 226
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +3
Query: 420 GARPPPXXRPXSXRXGPRPXPXXGVXSXLPNXPQPPXXP 536
G PPP P + GP P P G + P PP P
Sbjct: 295 GPPPPPGLPPITG--GPPPPPPPGGLPPITGGPPPPPPP 331
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,872,768
Number of Sequences: 27780
Number of extensions: 205319
Number of successful extensions: 1160
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2751568594
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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