Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_E13
         (787 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    24   1.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   4.3  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   9.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   9.8  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +2

Query: 17  STATSRERSNWLSVCHNYKFVKNVADLRSY 106
           S   S+    WL V  NYK +   A  R Y
Sbjct: 433 SAGFSQTNKTWLPVNENYKSLNLAAQKREY 462


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 33  ASGVTGFPSATIISL*KMSLISARIAGSVARRLPNAA 143
           +SGV     A  +S+  +S+I+AR AG       NAA
Sbjct: 628 SSGVLAKKVADRVSMLMISVITARHAGEYVCTAENAA 664


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +2

Query: 17  STATSRERSNWLSVCHNYKFVKNVAD 94
           S   S   + WL V  NYK V   A+
Sbjct: 427 SAGFSSSSNTWLRVNENYKTVNLAAE 452


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +2

Query: 17  STATSRERSNWLSVCHNYKFVKNVAD 94
           S   S   + WL V  NYK V   A+
Sbjct: 427 SAGFSSSSNTWLRVNENYKTVNLAAE 452


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,013
Number of Sequences: 438
Number of extensions: 3243
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)